RNA–Protein interactions for RNA: ENST00000569540.5

TMEM170A-207, Transcript of transmembrane protein 170A, humanhuman

TSL 2 BASIC

Gene TMEM170A, Length 2,331 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-207ENST00000569540 NISCHQ9Y2I1 1504 aa35.88■■■■□ 3.33
TMEM170A-207ENST00000569540 CCDC180Q9P1Z9 1646 aa32.12■■■□□ 2.73
TMEM170A-207ENST00000569540 ABCC9O60706 1549 aa30.88■■■□□ 2.53
TMEM170A-207ENST00000569540 MYO15BQ96JP2 1530 aa30.07■■■□□ 2.4
TMEM170A-207ENST00000569540 NACADO15069 1562 aa30.07■■■□□ 2.4
TMEM170A-207ENST00000569540 RB1CC1Q8TDY2 1594 aa30.04■■■□□ 2.4
TMEM170A-207ENST00000569540 ZCCHC6Q5VYS8 1495 aaKnown RBP29.95■■■□□ 2.39
TMEM170A-207ENST00000569540 DCAF1Q9Y4B6 1507 aa29.92■■■□□ 2.38
TMEM170A-207ENST00000569540 UNC13AQ9UPW8 1703 aa29.38■■■□□ 2.29
TMEM170A-207ENST00000569540 DCAF8L2P0C7V8 631 aa29.37■■■□□ 2.29
TMEM170A-207ENST00000569540 BICRAQ9NZM4 1560 aa29.09■■■□□ 2.25
TMEM170A-207ENST00000569540 SHROOM4Q9ULL8 1493 aa29.08■■■□□ 2.25
TMEM170A-207ENST00000569540 SCRIBQ14160 1630 aa28.95■■■□□ 2.22
TMEM170A-207ENST00000569540 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
TMEM170A-207ENST00000569540 EIF4G1Q04637 1599 aaKnown RBP28.29■■■□□ 2.12
TMEM170A-207ENST00000569540 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
TMEM170A-207ENST00000569540 CC2D2AQ9P2K1 1620 aa28.12■■■□□ 2.09
TMEM170A-207ENST00000569540 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
TMEM170A-207ENST00000569540 BAZ1AQ9NRL2 1556 aaPredicted RBP27.85■■■□□ 2.05
TMEM170A-207ENST00000569540 CECR2Q9BXF3 1484 aa27.84■■■□□ 2.05
TMEM170A-207ENST00000569540 PEG3Q9GZU2 1588 aa27.73■■■□□ 2.03
TMEM170A-207ENST00000569540 SMARCA2P51531 1590 aa27.7■■■□□ 2.03
TMEM170A-207ENST00000569540 NCAPD3P42695 1498 aa27.67■■■□□ 2.02
TMEM170A-207ENST00000569540 HMGXB3Q12766 1538 aa27.64■■■□□ 2.02
TMEM170A-207ENST00000569540 ATAD2BQ9ULI0 1458 aa27.62■■■□□ 2.01
TMEM170A-207ENST00000569540 MROH2BQ7Z745 1585 aa27.55■■■□□ 2
TMEM170A-207ENST00000569540 BAZ1BQ9UIG0 1483 aaKnown RBP27.37■■□□□ 1.97
TMEM170A-207ENST00000569540 WIZO95785 1651 aa27.26■■□□□ 1.95
TMEM170A-207ENST00000569540 RSF1Q96T23 1441 aaPredicted RBP27.26■■□□□ 1.95
TMEM170A-207ENST00000569540 TOP2AP11388 1531 aaKnown RBP27.12■■□□□ 1.93
TMEM170A-207ENST00000569540 SUPT5HO00267 1087 aaKnown RBP27.08■■□□□ 1.93
TMEM170A-207ENST00000569540 LAMC3Q9Y6N6 1575 aa26.99■■□□□ 1.91
TMEM170A-207ENST00000569540 CADPSQ9ULU8 1353 aa26.77■■□□□ 1.88
TMEM170A-207ENST00000569540 NESP48681 1621 aa26.75■■□□□ 1.87
TMEM170A-207ENST00000569540 PRDM2Q13029 1718 aa26.73■■□□□ 1.87
TMEM170A-207ENST00000569540 CFTRP13569 1480 aa26.69■■□□□ 1.86
TMEM170A-207ENST00000569540 PDS5BQ9NTI5 1447 aa26.68■■□□□ 1.86
TMEM170A-207ENST00000569540 ERCC6Q03468 1493 aa26.66■■□□□ 1.86
TMEM170A-207ENST00000569540 CCDC88BA6NC98 1476 aa26.64■■□□□ 1.86
TMEM170A-207ENST00000569540 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
TMEM170A-207ENST00000569540 CUX2O14529 1486 aa26.61■■□□□ 1.85
TMEM170A-207ENST00000569540 THOC2Q8NI27 1593 aaKnown RBP26.6■■□□□ 1.85
TMEM170A-207ENST00000569540 FANCD2Q9BXW9 1451 aa26.45■■□□□ 1.82
TMEM170A-207ENST00000569540 CEP164Q9UPV0 1460 aa26.45■■□□□ 1.82
TMEM170A-207ENST00000569540 MRC2Q9UBG0 1479 aa26.43■■□□□ 1.82
TMEM170A-207ENST00000569540 WDR62O43379 1518 aa26.42■■□□□ 1.82
TMEM170A-207ENST00000569540 ABCC8Q09428 1581 aa26.21■■□□□ 1.79
TMEM170A-207ENST00000569540 URB2Q14146 1524 aaKnown RBP26.19■■□□□ 1.78
TMEM170A-207ENST00000569540 DNMBPQ6XZF7 1577 aa26.13■■□□□ 1.77
TMEM170A-207ENST00000569540 TOPBP1Q92547 1522 aa26.07■■□□□ 1.76
TMEM170A-207ENST00000569540 IFT140Q96RY7 1462 aa25.94■■□□□ 1.74
TMEM170A-207ENST00000569540 WDR97A6NE52 1622 aa25.89■■□□□ 1.74
TMEM170A-207ENST00000569540 CUX1P39880 1505 aa25.88■■□□□ 1.73
TMEM170A-207ENST00000569540 TARBP1Q13395 1621 aaKnown RBP25.86■■□□□ 1.73
TMEM170A-207ENST00000569540 BIVM-ERCC5R4GMW8 1640 aa25.84■■□□□ 1.73
TMEM170A-207ENST00000569540 POLA1P09884 1462 aaPredicted RBP25.83■■□□□ 1.72
TMEM170A-207ENST00000569540 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
TMEM170A-207ENST00000569540 FGD5Q6ZNL6 1462 aa25.75■■□□□ 1.71
TMEM170A-207ENST00000569540 EIF4G3O43432 1585 aaKnown RBP25.7■■□□□ 1.71
TMEM170A-207ENST00000569540 WRNQ14191 1432 aaPredicted RBP eCLIP25.7■■□□□ 1.7
TMEM170A-207ENST00000569540 SYNJ1O43426 1573 aa25.66■■□□□ 1.7
TMEM170A-207ENST00000569540 SOGA1O94964 1423 aa25.65■■□□□ 1.7
TMEM170A-207ENST00000569540 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
TMEM170A-207ENST00000569540 ZNF608Q9ULD9 1512 aaPredicted RBP25.64■■□□□ 1.7
TMEM170A-207ENST00000569540 ABCA10Q8WWZ4 1543 aa25.62■■□□□ 1.69
TMEM170A-207ENST00000569540 RAD54L2Q9Y4B4 1467 aa25.58■■□□□ 1.69
TMEM170A-207ENST00000569540 ABCA5Q8WWZ7 1642 aa25.56■■□□□ 1.68
TMEM170A-207ENST00000569540 PBRM1Q86U86 1689 aa25.5■■□□□ 1.67
TMEM170A-207ENST00000569540 DNAJC5Q9H3Z4 198 aa25.47■■□□□ 1.67
TMEM170A-207ENST00000569540 AQRO60306 1485 aaKnown RBP eCLIP25.46■■□□□ 1.67
TMEM170A-207ENST00000569540 GRIN2BQ13224 1484 aa25.45■■□□□ 1.66
TMEM170A-207ENST00000569540 MAGI1Q96QZ7 1491 aaPredicted RBP25.45■■□□□ 1.66
TMEM170A-207ENST00000569540 GAPVD1Q14C86 1478 aa25.41■■□□□ 1.66
TMEM170A-207ENST00000569540 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
TMEM170A-207ENST00000569540 CHD1O14646 1710 aa25.38■■□□□ 1.65
TMEM170A-207ENST00000569540 ERICH3Q5RHP9 1530 aa25.35■■□□□ 1.65
TMEM170A-207ENST00000569540 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
TMEM170A-207ENST00000569540 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
TMEM170A-207ENST00000569540 SYNJ2O15056 1496 aa25.29■■□□□ 1.64
TMEM170A-207ENST00000569540 ADAMTS12P58397 1594 aa25.28■■□□□ 1.64
TMEM170A-207ENST00000569540 OSCARQ8IYS5 282 aa25.25■■□□□ 1.63
TMEM170A-207ENST00000569540 KIF27Q86VH2 1401 aa25.18■■□□□ 1.62
TMEM170A-207ENST00000569540 CUL7Q14999 1698 aa25.18■■□□□ 1.62
TMEM170A-207ENST00000569540 FHAD1B1AJZ9 1412 aa25.17■■□□□ 1.62
TMEM170A-207ENST00000569540 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
TMEM170A-207ENST00000569540 GRIN2AQ12879 1464 aa25.11■■□□□ 1.61
TMEM170A-207ENST00000569540 FAM9AQ8IZU1 332 aaPredicted RBP25.09■■□□□ 1.61
TMEM170A-207ENST00000569540 NUP160Q12769 1436 aa25.06■■□□□ 1.6
TMEM170A-207ENST00000569540 CHMP7Q8WUX9 453 aaPredicted RBP25.04■■□□□ 1.6
TMEM170A-207ENST00000569540 IGF1RP08069 1367 aa25.01■■□□□ 1.59
TMEM170A-207ENST00000569540 RIMBP3CA6NJZ7 1639 aa24.99■■□□□ 1.59
TMEM170A-207ENST00000569540 RIMBP3BA6NNM3 1639 aa24.99■■□□□ 1.59
TMEM170A-207ENST00000569540 RIMBP3Q9UFD9 1639 aa24.99■■□□□ 1.59
TMEM170A-207ENST00000569540 CEP170Q5SW79 1584 aa24.98■■□□□ 1.59
TMEM170A-207ENST00000569540 SHROOM2Q13796 1616 aa24.96■■□□□ 1.59
TMEM170A-207ENST00000569540 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
TMEM170A-207ENST00000569540 FBLN2P98095 1184 aa24.93■■□□□ 1.58
TMEM170A-207ENST00000569540 EHMT2Q96KQ7 1210 aa24.92■■□□□ 1.58
TMEM170A-207ENST00000569540 RUSC2Q8N2Y8 1516 aa24.91■■□□□ 1.58
TMEM170A-207ENST00000569540 EEA1Q15075 1411 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms