RNA–Protein interactions for RNA: ENST00000425828.1

TMEM240-202, Transcript of transmembrane protein 240, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM240, Length 717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM240-202ENST00000425828 NISCHQ9Y2I1 1504 aa49.94■■■■■ 5.58
TMEM240-202ENST00000425828 CCDC180Q9P1Z9 1646 aa44.86■■■■■ 4.77
TMEM240-202ENST00000425828 ABCC9O60706 1549 aa44.72■■■■■ 4.75
TMEM240-202ENST00000425828 RB1CC1Q8TDY2 1594 aa42.67■■■■■ 4.42
TMEM240-202ENST00000425828 NACADO15069 1562 aa42.39■■■■■ 4.38
TMEM240-202ENST00000425828 DCAF8L2P0C7V8 631 aa42.11■■■■■ 4.33
TMEM240-202ENST00000425828 MYO15BQ96JP2 1530 aa41.83■■■■■ 4.29
TMEM240-202ENST00000425828 DNAJC5BQ9UF47 199 aa41.82■■■■■ 4.29
TMEM240-202ENST00000425828 UNC13AQ9UPW8 1703 aa41.62■■■■■ 4.25
TMEM240-202ENST00000425828 PABPN1Q86U42 306 aaKnown RBP eCLIP41.61■■■■■ 4.25
TMEM240-202ENST00000425828 ZCCHC6Q5VYS8 1495 aaKnown RBP41.4■■■■■ 4.22
TMEM240-202ENST00000425828 BICRAQ9NZM4 1560 aa41.33■■■■■ 4.21
TMEM240-202ENST00000425828 DCAF1Q9Y4B6 1507 aa41.3■■■■■ 4.2
TMEM240-202ENST00000425828 SHROOM4Q9ULL8 1493 aa40.93■■■■■ 4.14
TMEM240-202ENST00000425828 SCRIBQ14160 1630 aa40.81■■■■■ 4.12
TMEM240-202ENST00000425828 CC2D2AQ9P2K1 1620 aa40.42■■■■■ 4.06
TMEM240-202ENST00000425828 EIF4G1Q04637 1599 aaKnown RBP40.35■■■■■ 4.05
TMEM240-202ENST00000425828 CECR2Q9BXF3 1484 aa40.32■■■■■ 4.04
TMEM240-202ENST00000425828 NCAPD3P42695 1498 aa39.1■■■■□ 3.85
TMEM240-202ENST00000425828 ATAD2BQ9ULI0 1458 aa38.96■■■■□ 3.83
TMEM240-202ENST00000425828 SMARCA4P51532 1647 aa38.96■■■■□ 3.83
TMEM240-202ENST00000425828 SMARCA2P51531 1590 aa38.92■■■■□ 3.82
TMEM240-202ENST00000425828 HMGXB3Q12766 1538 aa38.84■■■■□ 3.81
TMEM240-202ENST00000425828 BAZ1AQ9NRL2 1556 aaPredicted RBP38.81■■■■□ 3.8
TMEM240-202ENST00000425828 ERCC6Q03468 1493 aa38.67■■■■□ 3.78
TMEM240-202ENST00000425828 BAZ1BQ9UIG0 1483 aaKnown RBP38.63■■■■□ 3.77
TMEM240-202ENST00000425828 CUX2O14529 1486 aa38.6■■■■□ 3.77
TMEM240-202ENST00000425828 PEG3Q9GZU2 1588 aa38.59■■■■□ 3.77
TMEM240-202ENST00000425828 DNAJC5Q9H3Z4 198 aa38.46■■■■□ 3.75
TMEM240-202ENST00000425828 MROH2BQ7Z745 1585 aa38.44■■■■□ 3.74
TMEM240-202ENST00000425828 NESP48681 1621 aa38.4■■■■□ 3.74
TMEM240-202ENST00000425828 LAMC3Q9Y6N6 1575 aa38.24■■■■□ 3.71
TMEM240-202ENST00000425828 THOC2Q8NI27 1593 aaKnown RBP38.05■■■■□ 3.68
TMEM240-202ENST00000425828 PDS5BQ9NTI5 1447 aa38.03■■■■□ 3.68
TMEM240-202ENST00000425828 WIZO95785 1651 aa37.98■■■■□ 3.67
TMEM240-202ENST00000425828 KIF21AQ7Z4S6 1674 aa37.95■■■■□ 3.66
TMEM240-202ENST00000425828 CADPSQ9ULU8 1353 aa37.91■■■■□ 3.66
TMEM240-202ENST00000425828 RSF1Q96T23 1441 aaPredicted RBP37.68■■■■□ 3.62
TMEM240-202ENST00000425828 MRC2Q9UBG0 1479 aa37.67■■■■□ 3.62
TMEM240-202ENST00000425828 WDR62O43379 1518 aa37.56■■■■□ 3.6
TMEM240-202ENST00000425828 TOP2AP11388 1531 aaKnown RBP37.56■■■■□ 3.6
TMEM240-202ENST00000425828 CEP164Q9UPV0 1460 aa37.54■■■■□ 3.6
TMEM240-202ENST00000425828 CFTRP13569 1480 aa37.48■■■■□ 3.59
TMEM240-202ENST00000425828 FANCD2Q9BXW9 1451 aa37.48■■■■□ 3.59
TMEM240-202ENST00000425828 PRDM2Q13029 1718 aa37.15■■■■□ 3.54
TMEM240-202ENST00000425828 URB2Q14146 1524 aaKnown RBP37.14■■■■□ 3.54
TMEM240-202ENST00000425828 CCDC88BA6NC98 1476 aa37.1■■■■□ 3.53
TMEM240-202ENST00000425828 OSCARQ8IYS5 282 aa36.82■■■■□ 3.48
TMEM240-202ENST00000425828 TRIM41Q8WV44 630 aa36.79■■■■□ 3.48
TMEM240-202ENST00000425828 IFT140Q96RY7 1462 aa36.79■■■■□ 3.48
TMEM240-202ENST00000425828 ABCC8Q09428 1581 aa36.77■■■■□ 3.48
TMEM240-202ENST00000425828 TOPBP1Q92547 1522 aa36.76■■■■□ 3.48
TMEM240-202ENST00000425828 DNMBPQ6XZF7 1577 aa36.66■■■■□ 3.46
TMEM240-202ENST00000425828 ZNF608Q9ULD9 1512 aaPredicted RBP36.65■■■■□ 3.46
TMEM240-202ENST00000425828 EIF4G3O43432 1585 aaKnown RBP36.5■■■■□ 3.43
TMEM240-202ENST00000425828 TARBP1Q13395 1621 aaKnown RBP36.43■■■■□ 3.42
TMEM240-202ENST00000425828 POLA1P09884 1462 aaPredicted RBP36.39■■■■□ 3.42
TMEM240-202ENST00000425828 AQRO60306 1485 aaKnown RBP eCLIP36.34■■■■□ 3.41
TMEM240-202ENST00000425828 RIMBP3CA6NJZ7 1639 aa36.31■■■■□ 3.4
TMEM240-202ENST00000425828 RIMBP3BA6NNM3 1639 aa36.31■■■■□ 3.4
TMEM240-202ENST00000425828 RIMBP3Q9UFD9 1639 aa36.31■■■■□ 3.4
TMEM240-202ENST00000425828 SOGA1O94964 1423 aa36.25■■■■□ 3.39
TMEM240-202ENST00000425828 RAD54L2Q9Y4B4 1467 aa36.22■■■■□ 3.39
TMEM240-202ENST00000425828 CHD1O14646 1710 aa36.21■■■■□ 3.39
TMEM240-202ENST00000425828 ARHGEF11O15085 1522 aa36.21■■■■□ 3.39
TMEM240-202ENST00000425828 FGD5Q6ZNL6 1462 aa36.18■■■■□ 3.38
TMEM240-202ENST00000425828 WDR97A6NE52 1622 aa36.16■■■■□ 3.38
TMEM240-202ENST00000425828 FBLN2P98095 1184 aa36.13■■■■□ 3.37
TMEM240-202ENST00000425828 TDRD9Q8NDG6 1382 aaKnown RBP36.13■■■■□ 3.37
TMEM240-202ENST00000425828 CUX1P39880 1505 aa36.13■■■■□ 3.37
TMEM240-202ENST00000425828 SUPT5HO00267 1087 aaKnown RBP36.04■■■■□ 3.36
TMEM240-202ENST00000425828 SNAPC4Q5SXM2 1469 aa35.99■■■■□ 3.35
TMEM240-202ENST00000425828 GRIN2BQ13224 1484 aa35.95■■■■□ 3.35
TMEM240-202ENST00000425828 MAGI1Q96QZ7 1491 aaPredicted RBP35.95■■■■□ 3.35
TMEM240-202ENST00000425828 CYB5RLQ6IPT4 315 aa35.92■■■■□ 3.34
TMEM240-202ENST00000425828 CHMP7Q8WUX9 453 aaPredicted RBP35.89■■■■□ 3.34
TMEM240-202ENST00000425828 SYNJ1O43426 1573 aa35.84■■■■□ 3.33
TMEM240-202ENST00000425828 ARAP1Q96P48 1450 aa35.83■■■■□ 3.33
TMEM240-202ENST00000425828 SYNJ2O15056 1496 aa35.82■■■■□ 3.32
TMEM240-202ENST00000425828 GAPVD1Q14C86 1478 aa35.81■■■■□ 3.32
TMEM240-202ENST00000425828 CLASP1Q7Z460 1538 aa35.8■■■■□ 3.32
TMEM240-202ENST00000425828 PBRM1Q86U86 1689 aa35.79■■■■□ 3.32
TMEM240-202ENST00000425828 ABCA10Q8WWZ4 1543 aa35.78■■■■□ 3.32
TMEM240-202ENST00000425828 ABCA5Q8WWZ7 1642 aa35.72■■■■□ 3.31
TMEM240-202ENST00000425828 WRNQ14191 1432 aaPredicted RBP eCLIP35.67■■■■□ 3.3
TMEM240-202ENST00000425828 TOP2BQ02880 1626 aa35.61■■■■□ 3.29
TMEM240-202ENST00000425828 BIVM-ERCC5R4GMW8 1640 aa35.61■■■■□ 3.29
TMEM240-202ENST00000425828 TRHP20396 242 aaPredicted RBP35.54■■■■□ 3.28
TMEM240-202ENST00000425828 GRIN2AQ12879 1464 aa35.47■■■■□ 3.27
TMEM240-202ENST00000425828 ADAMTS12P58397 1594 aa35.45■■■■□ 3.27
TMEM240-202ENST00000425828 FHAD1B1AJZ9 1412 aa35.37■■■■□ 3.25
TMEM240-202ENST00000425828 ERICH3Q5RHP9 1530 aa35.36■■■■□ 3.25
TMEM240-202ENST00000425828 NUP160Q12769 1436 aa35.33■■■■□ 3.25
TMEM240-202ENST00000425828 CEP170Q5SW79 1584 aa35.3■■■■□ 3.24
TMEM240-202ENST00000425828 SHROOM2Q13796 1616 aa35.18■■■■□ 3.22
TMEM240-202ENST00000425828 ERCC6L2Q5T890 1561 aa35.18■■■■□ 3.22
TMEM240-202ENST00000425828 PRG4Q92954 1404 aaPredicted RBP34.99■■■■□ 3.19
TMEM240-202ENST00000425828 JPH4Q96JJ6 628 aa34.97■■■■□ 3.19
TMEM240-202ENST00000425828 RUSC2Q8N2Y8 1516 aa34.96■■■■□ 3.19
TMEM240-202ENST00000425828 KIF27Q86VH2 1401 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms