RNA–Protein interactions for RNA: ENST00000616787.4

SELENOF-208, Transcript of selenoprotein F, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SELENOF, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOF-208ENST00000616787 NISCHQ9Y2I1 1504 aa40.04■■■■■ 4
SELENOF-208ENST00000616787 CCDC180Q9P1Z9 1646 aa35.62■■■■□ 3.29
SELENOF-208ENST00000616787 ABCC9O60706 1549 aa34.89■■■■□ 3.18
SELENOF-208ENST00000616787 DCAF8L2P0C7V8 631 aa33.53■■■□□ 2.96
SELENOF-208ENST00000616787 RB1CC1Q8TDY2 1594 aa33.51■■■□□ 2.96
SELENOF-208ENST00000616787 NACADO15069 1562 aa33.45■■■□□ 2.95
SELENOF-208ENST00000616787 ZCCHC6Q5VYS8 1495 aaKnown RBP33.36■■■□□ 2.93
SELENOF-208ENST00000616787 MYO15BQ96JP2 1530 aa33.2■■■□□ 2.91
SELENOF-208ENST00000616787 DCAF1Q9Y4B6 1507 aa33.08■■■□□ 2.89
SELENOF-208ENST00000616787 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
SELENOF-208ENST00000616787 PABPN1Q86U42 306 aaKnown RBP eCLIP32.6■■■□□ 2.81
SELENOF-208ENST00000616787 SCRIBQ14160 1630 aa32.57■■■□□ 2.8
SELENOF-208ENST00000616787 BICRAQ9NZM4 1560 aa32.53■■■□□ 2.8
SELENOF-208ENST00000616787 SHROOM4Q9ULL8 1493 aa32.08■■■□□ 2.73
SELENOF-208ENST00000616787 DNAJC5BQ9UF47 199 aa32.01■■■□□ 2.72
SELENOF-208ENST00000616787 EIF4G1Q04637 1599 aaKnown RBP31.67■■■□□ 2.66
SELENOF-208ENST00000616787 CC2D2AQ9P2K1 1620 aa31.56■■■□□ 2.64
SELENOF-208ENST00000616787 CECR2Q9BXF3 1484 aa31.31■■■□□ 2.6
SELENOF-208ENST00000616787 SMARCA4P51532 1647 aa31.11■■■□□ 2.57
SELENOF-208ENST00000616787 BAZ1AQ9NRL2 1556 aaPredicted RBP31.04■■■□□ 2.56
SELENOF-208ENST00000616787 MROH2BQ7Z745 1585 aa30.9■■■□□ 2.54
SELENOF-208ENST00000616787 ATAD2BQ9ULI0 1458 aa30.9■■■□□ 2.54
SELENOF-208ENST00000616787 SMARCA2P51531 1590 aa30.86■■■□□ 2.53
SELENOF-208ENST00000616787 NCAPD3P42695 1498 aa30.85■■■□□ 2.53
SELENOF-208ENST00000616787 PEG3Q9GZU2 1588 aa30.76■■■□□ 2.51
SELENOF-208ENST00000616787 HMGXB3Q12766 1538 aa30.72■■■□□ 2.51
SELENOF-208ENST00000616787 BAZ1BQ9UIG0 1483 aaKnown RBP30.67■■■□□ 2.5
SELENOF-208ENST00000616787 WIZO95785 1651 aa30.6■■■□□ 2.49
SELENOF-208ENST00000616787 RSF1Q96T23 1441 aaPredicted RBP30.51■■■□□ 2.47
SELENOF-208ENST00000616787 TOP2AP11388 1531 aaKnown RBP30.21■■■□□ 2.43
SELENOF-208ENST00000616787 NESP48681 1621 aa30.2■■■□□ 2.43
SELENOF-208ENST00000616787 LAMC3Q9Y6N6 1575 aa30.08■■■□□ 2.41
SELENOF-208ENST00000616787 ERCC6Q03468 1493 aa30.06■■■□□ 2.4
SELENOF-208ENST00000616787 CADPSQ9ULU8 1353 aa29.96■■■□□ 2.39
SELENOF-208ENST00000616787 KIF21AQ7Z4S6 1674 aa29.89■■■□□ 2.37
SELENOF-208ENST00000616787 CCDC88BA6NC98 1476 aa29.86■■■□□ 2.37
SELENOF-208ENST00000616787 PDS5BQ9NTI5 1447 aa29.85■■■□□ 2.37
SELENOF-208ENST00000616787 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
SELENOF-208ENST00000616787 CFTRP13569 1480 aa29.8■■■□□ 2.36
SELENOF-208ENST00000616787 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
SELENOF-208ENST00000616787 CUX2O14529 1486 aa29.68■■■□□ 2.34
SELENOF-208ENST00000616787 PRDM2Q13029 1718 aa29.67■■■□□ 2.34
SELENOF-208ENST00000616787 FANCD2Q9BXW9 1451 aa29.66■■■□□ 2.34
SELENOF-208ENST00000616787 CEP164Q9UPV0 1460 aa29.62■■■□□ 2.33
SELENOF-208ENST00000616787 MRC2Q9UBG0 1479 aa29.56■■■□□ 2.32
SELENOF-208ENST00000616787 WDR62O43379 1518 aa29.47■■■□□ 2.31
SELENOF-208ENST00000616787 URB2Q14146 1524 aaKnown RBP29.37■■■□□ 2.29
SELENOF-208ENST00000616787 TOPBP1Q92547 1522 aa29.19■■■□□ 2.26
SELENOF-208ENST00000616787 DNMBPQ6XZF7 1577 aa29.15■■■□□ 2.26
SELENOF-208ENST00000616787 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
SELENOF-208ENST00000616787 CUX1P39880 1505 aa28.98■■■□□ 2.23
SELENOF-208ENST00000616787 IFT140Q96RY7 1462 aa28.97■■■□□ 2.23
SELENOF-208ENST00000616787 POLA1P09884 1462 aaPredicted RBP28.94■■■□□ 2.22
SELENOF-208ENST00000616787 ZNF608Q9ULD9 1512 aaPredicted RBP28.9■■■□□ 2.22
SELENOF-208ENST00000616787 TARBP1Q13395 1621 aaKnown RBP28.88■■■□□ 2.21
SELENOF-208ENST00000616787 FGD5Q6ZNL6 1462 aa28.88■■■□□ 2.21
SELENOF-208ENST00000616787 RAD54L2Q9Y4B4 1467 aa28.84■■■□□ 2.21
SELENOF-208ENST00000616787 SOGA1O94964 1423 aa28.8■■■□□ 2.2
SELENOF-208ENST00000616787 EIF4G3O43432 1585 aaKnown RBP28.8■■■□□ 2.2
SELENOF-208ENST00000616787 DNAJC5Q9H3Z4 198 aa28.78■■■□□ 2.2
SELENOF-208ENST00000616787 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
SELENOF-208ENST00000616787 SYNJ1O43426 1573 aa28.75■■■□□ 2.19
SELENOF-208ENST00000616787 BIVM-ERCC5R4GMW8 1640 aa28.73■■■□□ 2.19
SELENOF-208ENST00000616787 AQRO60306 1485 aaKnown RBP eCLIP28.73■■■□□ 2.19
SELENOF-208ENST00000616787 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
SELENOF-208ENST00000616787 TDRD9Q8NDG6 1382 aaKnown RBP28.67■■■□□ 2.18
SELENOF-208ENST00000616787 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
SELENOF-208ENST00000616787 ABCA10Q8WWZ4 1543 aa28.57■■■□□ 2.16
SELENOF-208ENST00000616787 PBRM1Q86U86 1689 aa28.49■■■□□ 2.15
SELENOF-208ENST00000616787 ABCA5Q8WWZ7 1642 aa28.49■■■□□ 2.15
SELENOF-208ENST00000616787 GAPVD1Q14C86 1478 aa28.49■■■□□ 2.15
SELENOF-208ENST00000616787 CHD1O14646 1710 aa28.48■■■□□ 2.15
SELENOF-208ENST00000616787 OSCARQ8IYS5 282 aa28.47■■■□□ 2.15
SELENOF-208ENST00000616787 GRIN2BQ13224 1484 aa28.46■■■□□ 2.15
SELENOF-208ENST00000616787 SNAPC4Q5SXM2 1469 aa28.46■■■□□ 2.15
SELENOF-208ENST00000616787 FBLN2P98095 1184 aa28.41■■■□□ 2.14
SELENOF-208ENST00000616787 MAGI1Q96QZ7 1491 aaPredicted RBP28.38■■■□□ 2.13
SELENOF-208ENST00000616787 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
SELENOF-208ENST00000616787 SYNJ2O15056 1496 aa28.28■■■□□ 2.12
SELENOF-208ENST00000616787 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
SELENOF-208ENST00000616787 ADAMTS12P58397 1594 aa28.22■■■□□ 2.11
SELENOF-208ENST00000616787 KIF27Q86VH2 1401 aa28.16■■■□□ 2.1
SELENOF-208ENST00000616787 FHAD1B1AJZ9 1412 aa28.13■■■□□ 2.09
SELENOF-208ENST00000616787 GRIN2AQ12879 1464 aa28.11■■■□□ 2.09
SELENOF-208ENST00000616787 TRIM41Q8WV44 630 aa28.11■■■□□ 2.09
SELENOF-208ENST00000616787 CLASP1Q7Z460 1538 aa28.08■■■□□ 2.09
SELENOF-208ENST00000616787 RIMBP3CA6NJZ7 1639 aa28.08■■■□□ 2.09
SELENOF-208ENST00000616787 RIMBP3BA6NNM3 1639 aa28.08■■■□□ 2.09
SELENOF-208ENST00000616787 RIMBP3Q9UFD9 1639 aa28.08■■■□□ 2.09
SELENOF-208ENST00000616787 ARHGEF11O15085 1522 aa28.04■■■□□ 2.08
SELENOF-208ENST00000616787 IGF1RP08069 1367 aa28.04■■■□□ 2.08
SELENOF-208ENST00000616787 CEP170Q5SW79 1584 aa28.01■■■□□ 2.07
SELENOF-208ENST00000616787 CUL7Q14999 1698 aa28■■■□□ 2.07
SELENOF-208ENST00000616787 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
SELENOF-208ENST00000616787 NUP160Q12769 1436 aa27.96■■■□□ 2.07
SELENOF-208ENST00000616787 CARMIL1Q5VZK9 1371 aa27.88■■■□□ 2.05
SELENOF-208ENST00000616787 ARAP1Q96P48 1450 aa27.82■■■□□ 2.04
SELENOF-208ENST00000616787 CYB5RLQ6IPT4 315 aa27.8■■■□□ 2.04
SELENOF-208ENST00000616787 SHROOM2Q13796 1616 aa27.79■■■□□ 2.04
SELENOF-208ENST00000616787 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms