RNA–Protein interactions for RNA: ENST00000400904.7

CTNNBIP1-204, Transcript of catenin beta interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNBIP1, Length 1,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1-204ENST00000400904 NISCHQ9Y2I1 1504 aa47.48■■■■■ 5.19
CTNNBIP1-204ENST00000400904 CCDC180Q9P1Z9 1646 aa42.28■■■■■ 4.36
CTNNBIP1-204ENST00000400904 ABCC9O60706 1549 aa41.75■■■■■ 4.27
CTNNBIP1-204ENST00000400904 RB1CC1Q8TDY2 1594 aa40.01■■■■□ 3.99
CTNNBIP1-204ENST00000400904 DCAF8L2P0C7V8 631 aa39.93■■■■□ 3.98
CTNNBIP1-204ENST00000400904 NACADO15069 1562 aa39.89■■■■□ 3.98
CTNNBIP1-204ENST00000400904 MYO15BQ96JP2 1530 aa39.54■■■■□ 3.92
CTNNBIP1-204ENST00000400904 ZCCHC6Q5VYS8 1495 aaKnown RBP39.46■■■■□ 3.91
CTNNBIP1-204ENST00000400904 DCAF1Q9Y4B6 1507 aa39.25■■■■□ 3.87
CTNNBIP1-204ENST00000400904 PABPN1Q86U42 306 aaKnown RBP eCLIP39.02■■■■□ 3.84
CTNNBIP1-204ENST00000400904 UNC13AQ9UPW8 1703 aa39■■■■□ 3.83
CTNNBIP1-204ENST00000400904 BICRAQ9NZM4 1560 aa38.78■■■■□ 3.8
CTNNBIP1-204ENST00000400904 DNAJC5BQ9UF47 199 aa38.65■■■■□ 3.78
CTNNBIP1-204ENST00000400904 SCRIBQ14160 1630 aa38.59■■■■□ 3.77
CTNNBIP1-204ENST00000400904 SHROOM4Q9ULL8 1493 aa38.35■■■■□ 3.73
CTNNBIP1-204ENST00000400904 EIF4G1Q04637 1599 aaKnown RBP37.8■■■■□ 3.64
CTNNBIP1-204ENST00000400904 CC2D2AQ9P2K1 1620 aa37.72■■■■□ 3.63
CTNNBIP1-204ENST00000400904 CECR2Q9BXF3 1484 aa37.56■■■■□ 3.6
CTNNBIP1-204ENST00000400904 SMARCA4P51532 1647 aa36.87■■■■□ 3.49
CTNNBIP1-204ENST00000400904 NCAPD3P42695 1498 aa36.83■■■■□ 3.49
CTNNBIP1-204ENST00000400904 BAZ1AQ9NRL2 1556 aaPredicted RBP36.82■■■■□ 3.48
CTNNBIP1-204ENST00000400904 ATAD2BQ9ULI0 1458 aa36.8■■■■□ 3.48
CTNNBIP1-204ENST00000400904 SMARCA2P51531 1590 aa36.73■■■■□ 3.47
CTNNBIP1-204ENST00000400904 MROH2BQ7Z745 1585 aa36.58■■■■□ 3.45
CTNNBIP1-204ENST00000400904 HMGXB3Q12766 1538 aa36.57■■■■□ 3.44
CTNNBIP1-204ENST00000400904 PEG3Q9GZU2 1588 aa36.52■■■■□ 3.44
CTNNBIP1-204ENST00000400904 BAZ1BQ9UIG0 1483 aaKnown RBP36.48■■■■□ 3.43
CTNNBIP1-204ENST00000400904 WIZO95785 1651 aa36.15■■■■□ 3.38
CTNNBIP1-204ENST00000400904 RSF1Q96T23 1441 aaPredicted RBP36.08■■■■□ 3.37
CTNNBIP1-204ENST00000400904 ERCC6Q03468 1493 aa36.04■■■■□ 3.36
CTNNBIP1-204ENST00000400904 NESP48681 1621 aa36.03■■■■□ 3.36
CTNNBIP1-204ENST00000400904 LAMC3Q9Y6N6 1575 aa35.88■■■■□ 3.33
CTNNBIP1-204ENST00000400904 CADPSQ9ULU8 1353 aa35.76■■■■□ 3.32
CTNNBIP1-204ENST00000400904 TOP2AP11388 1531 aaKnown RBP35.76■■■■□ 3.31
CTNNBIP1-204ENST00000400904 CUX2O14529 1486 aa35.73■■■■□ 3.31
CTNNBIP1-204ENST00000400904 PDS5BQ9NTI5 1447 aa35.71■■■■□ 3.31
CTNNBIP1-204ENST00000400904 KIF21AQ7Z4S6 1674 aa35.53■■■■□ 3.28
CTNNBIP1-204ENST00000400904 THOC2Q8NI27 1593 aaKnown RBP35.49■■■■□ 3.27
CTNNBIP1-204ENST00000400904 CFTRP13569 1480 aa35.46■■■■□ 3.27
CTNNBIP1-204ENST00000400904 CCDC88BA6NC98 1476 aa35.38■■■■□ 3.25
CTNNBIP1-204ENST00000400904 FANCD2Q9BXW9 1451 aa35.34■■■■□ 3.25
CTNNBIP1-204ENST00000400904 MRC2Q9UBG0 1479 aa35.32■■■■□ 3.24
CTNNBIP1-204ENST00000400904 CEP164Q9UPV0 1460 aa35.31■■■■□ 3.24
CTNNBIP1-204ENST00000400904 WDR62O43379 1518 aa35.18■■■■□ 3.22
CTNNBIP1-204ENST00000400904 DNAJC5Q9H3Z4 198 aa35.08■■■■□ 3.21
CTNNBIP1-204ENST00000400904 PRDM2Q13029 1718 aa35.06■■■■□ 3.2
CTNNBIP1-204ENST00000400904 SUPT5HO00267 1087 aaKnown RBP35.02■■■■□ 3.2
CTNNBIP1-204ENST00000400904 URB2Q14146 1524 aaKnown RBP34.98■■■■□ 3.19
CTNNBIP1-204ENST00000400904 ABCC8Q09428 1581 aa34.73■■■■□ 3.15
CTNNBIP1-204ENST00000400904 TOPBP1Q92547 1522 aa34.72■■■■□ 3.15
CTNNBIP1-204ENST00000400904 DNMBPQ6XZF7 1577 aa34.63■■■■□ 3.13
CTNNBIP1-204ENST00000400904 IFT140Q96RY7 1462 aa34.59■■■■□ 3.13
CTNNBIP1-204ENST00000400904 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.1
CTNNBIP1-204ENST00000400904 POLA1P09884 1462 aaPredicted RBP34.4■■■■□ 3.1
CTNNBIP1-204ENST00000400904 CUX1P39880 1505 aa34.33■■■■□ 3.09
CTNNBIP1-204ENST00000400904 TARBP1Q13395 1621 aaKnown RBP34.33■■■■□ 3.09
CTNNBIP1-204ENST00000400904 SOGA1O94964 1423 aa34.31■■■■□ 3.08
CTNNBIP1-204ENST00000400904 OSCARQ8IYS5 282 aa34.29■■■■□ 3.08
CTNNBIP1-204ENST00000400904 FGD5Q6ZNL6 1462 aa34.27■■■■□ 3.08
CTNNBIP1-204ENST00000400904 RAD54L2Q9Y4B4 1467 aa34.27■■■■□ 3.08
CTNNBIP1-204ENST00000400904 EIF4G3O43432 1585 aaKnown RBP34.25■■■■□ 3.07
CTNNBIP1-204ENST00000400904 AQRO60306 1485 aaKnown RBP eCLIP34.25■■■■□ 3.075e-10■■■■■ 39.2
CTNNBIP1-204ENST00000400904 TDRD9Q8NDG6 1382 aaKnown RBP34.16■■■■□ 3.06
CTNNBIP1-204ENST00000400904 WDR97A6NE52 1622 aa34.04■■■■□ 3.04
CTNNBIP1-204ENST00000400904 WRNQ14191 1432 aaPredicted RBP eCLIP34.04■■■■□ 3.04
CTNNBIP1-204ENST00000400904 FBLN2P98095 1184 aa33.97■■■■□ 3.03
CTNNBIP1-204ENST00000400904 TOP2BQ02880 1626 aa33.94■■■■□ 3.02
CTNNBIP1-204ENST00000400904 ABCA10Q8WWZ4 1543 aa33.93■■■■□ 3.02
CTNNBIP1-204ENST00000400904 GRIN2BQ13224 1484 aa33.92■■■■□ 3.02
CTNNBIP1-204ENST00000400904 BIVM-ERCC5R4GMW8 1640 aa33.91■■■■□ 3.02
CTNNBIP1-204ENST00000400904 SYNJ1O43426 1573 aa33.9■■■■□ 3.02
CTNNBIP1-204ENST00000400904 SNAPC4Q5SXM2 1469 aa33.89■■■■□ 3.02
CTNNBIP1-204ENST00000400904 GAPVD1Q14C86 1478 aa33.88■■■■□ 3.01
CTNNBIP1-204ENST00000400904 CHD1O14646 1710 aa33.87■■■■□ 3.01
CTNNBIP1-204ENST00000400904 MAGI1Q96QZ7 1491 aaPredicted RBP33.84■■■■□ 3.01
CTNNBIP1-204ENST00000400904 CHMP7Q8WUX9 453 aaPredicted RBP33.82■■■■□ 3
CTNNBIP1-204ENST00000400904 TRIM41Q8WV44 630 aa33.8■■■■□ 3
CTNNBIP1-204ENST00000400904 ABCA5Q8WWZ7 1642 aa33.78■■■■□ 3
CTNNBIP1-204ENST00000400904 PBRM1Q86U86 1689 aa33.74■■■□□ 2.99
CTNNBIP1-204ENST00000400904 SYNJ2O15056 1496 aa33.72■■■□□ 2.99
CTNNBIP1-204ENST00000400904 RIMBP3CA6NJZ7 1639 aa33.66■■■□□ 2.98
CTNNBIP1-204ENST00000400904 RIMBP3BA6NNM3 1639 aa33.66■■■□□ 2.98
CTNNBIP1-204ENST00000400904 RIMBP3Q9UFD9 1639 aa33.66■■■□□ 2.98
CTNNBIP1-204ENST00000400904 ARHGEF11O15085 1522 aa33.64■■■□□ 2.98
CTNNBIP1-204ENST00000400904 CLASP1Q7Z460 1538 aa33.53■■■□□ 2.96
CTNNBIP1-204ENST00000400904 ERICH3Q5RHP9 1530 aa33.51■■■□□ 2.95
CTNNBIP1-204ENST00000400904 FHAD1B1AJZ9 1412 aa33.49■■■□□ 2.95
CTNNBIP1-204ENST00000400904 ADAMTS12P58397 1594 aa33.48■■■□□ 2.95
CTNNBIP1-204ENST00000400904 GRIN2AQ12879 1464 aa33.46■■■□□ 2.95
CTNNBIP1-204ENST00000400904 CYB5RLQ6IPT4 315 aa33.44■■■□□ 2.94
CTNNBIP1-204ENST00000400904 KIF27Q86VH2 1401 aa33.36■■■□□ 2.93
CTNNBIP1-204ENST00000400904 ARAP1Q96P48 1450 aa33.35■■■□□ 2.93
CTNNBIP1-204ENST00000400904 NUP160Q12769 1436 aa33.32■■■□□ 2.92
CTNNBIP1-204ENST00000400904 IGF1RP08069 1367 aa33.28■■■□□ 2.92
CTNNBIP1-204ENST00000400904 CEP170Q5SW79 1584 aa33.28■■■□□ 2.92
CTNNBIP1-204ENST00000400904 CUL7Q14999 1698 aa33.12■■■□□ 2.89
CTNNBIP1-204ENST00000400904 CARMIL1Q5VZK9 1371 aa33.08■■■□□ 2.89
CTNNBIP1-204ENST00000400904 JPH4Q96JJ6 628 aa33.07■■■□□ 2.88
CTNNBIP1-204ENST00000400904 SHROOM2Q13796 1616 aa33.06■■■□□ 2.88
CTNNBIP1-204ENST00000400904 ERCC6L2Q5T890 1561 aa33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms