RNA–Protein interactions for RNA: ENST00000397928.5

TRPM2-203, Transcript of transient receptor potential cation channel subfamily M member 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM2, Length 6,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM2-203ENST00000397928 DCAF8L2P0C7V8 631 aa22.07■■□□□ 1.12
TRPM2-203ENST00000397928 SUPT5HO00267 1087 aaKnown RBP21.18■□□□□ 0.98
TRPM2-203ENST00000397928 NISCHQ9Y2I1 1504 aa21.14■□□□□ 0.97
TRPM2-203ENST00000397928 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
TRPM2-203ENST00000397928 EHMT2Q96KQ7 1210 aa20.54■□□□□ 0.88
TRPM2-203ENST00000397928 PELP1Q8IZL8 1130 aaKnown RBP20.44■□□□□ 0.86
TRPM2-203ENST00000397928 APLP2Q06481 763 aa20.18■□□□□ 0.82
TRPM2-203ENST00000397928 PCGF6Q9BYE7 350 aa20.01■□□□□ 0.79
TRPM2-203ENST00000397928 FAM9AQ8IZU1 332 aaPredicted RBP19.99■□□□□ 0.79
TRPM2-203ENST00000397928 TTBK1Q5TCY1 1321 aaPredicted RBP19.89■□□□□ 0.78
TRPM2-203ENST00000397928 ZEB1P37275 1124 aaPredicted RBP19.77■□□□□ 0.76
TRPM2-203ENST00000397928 CENPBP07199 599 aaPredicted RBP19.75■□□□□ 0.75
TRPM2-203ENST00000397928 CCER1Q8TC90 406 aaPredicted RBP19.65■□□□□ 0.74
TRPM2-203ENST00000397928 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
TRPM2-203ENST00000397928 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
TRPM2-203ENST00000397928 RANGAP1P46060 587 aaPredicted RBP19.58■□□□□ 0.73
TRPM2-203ENST00000397928 ATP1B4Q9UN42 357 aaPredicted RBP19.41■□□□□ 0.7
TRPM2-203ENST00000397928 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.69
TRPM2-203ENST00000397928 YTHDC1Q96MU7 727 aaKnown RBP19.31■□□□□ 0.68
TRPM2-203ENST00000397928 NEFLP07196 543 aa19.28■□□□□ 0.68
TRPM2-203ENST00000397928 MYT1Q01538 1121 aa19.21■□□□□ 0.67
TRPM2-203ENST00000397928 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
TRPM2-203ENST00000397928 PPARGC1BQ86YN6 1023 aaKnown RBP19.16■□□□□ 0.66
TRPM2-203ENST00000397928 HRCP23327 699 aa19.05■□□□□ 0.64
TRPM2-203ENST00000397928 LOC105371045A0A1W2PR82 267 aa18.85■□□□□ 0.61
TRPM2-203ENST00000397928 ITGAEP38570 1179 aa18.81■□□□□ 0.6
TRPM2-203ENST00000397928 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
TRPM2-203ENST00000397928 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
TRPM2-203ENST00000397928 DAXXQ9UER7 740 aaPredicted RBP18.72■□□□□ 0.59
TRPM2-203ENST00000397928 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.59
TRPM2-203ENST00000397928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.64■□□□□ 0.57
TRPM2-203ENST00000397928 MYT1LQ9UL68 1186 aa18.57■□□□□ 0.56
TRPM2-203ENST00000397928 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
TRPM2-203ENST00000397928 CNGB1Q14028 1251 aaPredicted RBP18.52■□□□□ 0.56
TRPM2-203ENST00000397928 FAM50AQ14320 339 aaKnown RBP18.35■□□□□ 0.53
TRPM2-203ENST00000397928 RTL5Q5HYW3 569 aaPredicted RBP18.34■□□□□ 0.53
TRPM2-203ENST00000397928 ZNF316A6NFI3 1004 aaPredicted RBP18.33■□□□□ 0.52
TRPM2-203ENST00000397928 SLC4A1APQ9BWU0 796 aaKnown RBP18.31■□□□□ 0.52
TRPM2-203ENST00000397928 CLSPNQ9HAW4 1339 aa18.26■□□□□ 0.51
TRPM2-203ENST00000397928 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
TRPM2-203ENST00000397928 TRIM52Q96A61 297 aa18.24■□□□□ 0.51
TRPM2-203ENST00000397928 GTF3C3Q9Y5Q9 886 aa18.24■□□□□ 0.51
TRPM2-203ENST00000397928 BCANQ96GW7 911 aa18.19■□□□□ 0.5
TRPM2-203ENST00000397928 ANP32CO43423 234 aa18.16■□□□□ 0.5
TRPM2-203ENST00000397928 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
TRPM2-203ENST00000397928 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
TRPM2-203ENST00000397928 ABCC9O60706 1549 aa18.05■□□□□ 0.48
TRPM2-203ENST00000397928 ZNF326Q5BKZ1 582 aaKnown RBP18.02■□□□□ 0.47
TRPM2-203ENST00000397928 ACIN1Q9UKV3 1341 aaKnown RBP17.98■□□□□ 0.47
TRPM2-203ENST00000397928 ZBTB47Q9UFB7 747 aaPredicted RBP17.88■□□□□ 0.45
TRPM2-203ENST00000397928 CANXP27824 592 aaKnown RBP17.85■□□□□ 0.45
TRPM2-203ENST00000397928 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.45
TRPM2-203ENST00000397928 P3H3Q8IVL6 736 aa17.8■□□□□ 0.44
TRPM2-203ENST00000397928 ANP32AP39687 249 aaKnown RBP17.78■□□□□ 0.44
TRPM2-203ENST00000397928 FBLN2P98095 1184 aa17.77■□□□□ 0.44
TRPM2-203ENST00000397928 DCAF1Q9Y4B6 1507 aa17.73■□□□□ 0.43
TRPM2-203ENST00000397928 ARID3CA6NKF2 412 aa17.71■□□□□ 0.43
TRPM2-203ENST00000397928 NEFMP07197 916 aa17.69■□□□□ 0.42
TRPM2-203ENST00000397928 BCL11AQ9H165 835 aa17.69■□□□□ 0.42
TRPM2-203ENST00000397928 FKBP8Q14318 412 aa17.68■□□□□ 0.42
TRPM2-203ENST00000397928 NPM2Q86SE8 214 aaKnown RBP17.68■□□□□ 0.42
TRPM2-203ENST00000397928 SLC24A1O60721 1099 aa17.66■□□□□ 0.42
TRPM2-203ENST00000397928 ZNF777Q9ULD5 760 aaPredicted RBP17.65■□□□□ 0.42
TRPM2-203ENST00000397928 TONSLQ96HA7 1378 aa17.63■□□□□ 0.41
TRPM2-203ENST00000397928 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
TRPM2-203ENST00000397928 HNRNPUQ00839 825 aaKnown RBP eCLIP17.57■□□□□ 0.4
TRPM2-203ENST00000397928 DDX10Q13206 875 aaKnown RBP17.55■□□□□ 0.4
TRPM2-203ENST00000397928 FAM9BQ8IZU0 186 aa17.53■□□□□ 0.4
TRPM2-203ENST00000397928 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
TRPM2-203ENST00000397928 ANP32BQ92688 251 aaKnown RBP17.45■□□□□ 0.38
TRPM2-203ENST00000397928 UPF2Q9HAU5 1272 aaKnown RBP17.44■□□□□ 0.38
TRPM2-203ENST00000397928 HSP90AA1P07900 732 aaKnown RBP17.42■□□□□ 0.38
TRPM2-203ENST00000397928 SALL2Q9Y467 1007 aaPredicted RBP17.4■□□□□ 0.38
TRPM2-203ENST00000397928 CCDC136Q96JN2 1154 aa17.4■□□□□ 0.38
TRPM2-203ENST00000397928 EIF5BO60841 1220 aaKnown RBP17.38■□□□□ 0.37
TRPM2-203ENST00000397928 TMC1Q8TDI8 760 aa17.38■□□□□ 0.37
TRPM2-203ENST00000397928 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
TRPM2-203ENST00000397928 CHGAP10645 457 aaKnown RBP17.38■□□□□ 0.37
TRPM2-203ENST00000397928 CHIC2Q9UKJ5 165 aa17.37■□□□□ 0.37
TRPM2-203ENST00000397928 MIER1Q8N108 512 aa17.36■□□□□ 0.37
TRPM2-203ENST00000397928 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.35■□□□□ 0.37
TRPM2-203ENST00000397928 NBR1Q14596 966 aa17.34■□□□□ 0.37
TRPM2-203ENST00000397928 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
TRPM2-203ENST00000397928 STAG3Q9UJ98 1225 aa17.31■□□□□ 0.36
TRPM2-203ENST00000397928 WDR43Q15061 677 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRPM2-203ENST00000397928 ESF1Q9H501 851 aaKnown RBP17.29■□□□□ 0.36
TRPM2-203ENST00000397928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRPM2-203ENST00000397928 CLIP1P30622 1438 aa17.27■□□□□ 0.35
TRPM2-203ENST00000397928 IRX6P78412 446 aaPredicted RBP17.26■□□□□ 0.35
TRPM2-203ENST00000397928 MYO15BQ96JP2 1530 aa17.26■□□□□ 0.35
TRPM2-203ENST00000397928 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
TRPM2-203ENST00000397928 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
TRPM2-203ENST00000397928 KDM2AQ9Y2K7 1162 aa17.25■□□□□ 0.35
TRPM2-203ENST00000397928 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
TRPM2-203ENST00000397928 EIF4G2P78344 907 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRPM2-203ENST00000397928 TSPY4P0CV99 314 aa17.19■□□□□ 0.34
TRPM2-203ENST00000397928 TSPY10P0CW01 314 aa17.19■□□□□ 0.34
TRPM2-203ENST00000397928 GLIPR1L2Q4G1C9 344 aa17.18■□□□□ 0.34
TRPM2-203ENST00000397928 GOLGA3Q08378 1498 aa17.18■□□□□ 0.34
TRPM2-203ENST00000397928 ARXQ96QS3 562 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms