RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 NISCHQ9Y2I1 1504 aa49.16■■■■■ 5.46
CERNA3-201ENST00000521403 CCDC180Q9P1Z9 1646 aa44.01■■■■■ 4.64
CERNA3-201ENST00000521403 ABCC9O60706 1549 aa43.94■■■■■ 4.62
CERNA3-201ENST00000521403 RB1CC1Q8TDY2 1594 aa41.84■■■■■ 4.29
CERNA3-201ENST00000521403 NACADO15069 1562 aa41.59■■■■■ 4.25
CERNA3-201ENST00000521403 DCAF8L2P0C7V8 631 aa41.55■■■■■ 4.24
CERNA3-201ENST00000521403 MYO15BQ96JP2 1530 aa41.03■■■■■ 4.16
CERNA3-201ENST00000521403 DNAJC5BQ9UF47 199 aa41.01■■■■■ 4.16
CERNA3-201ENST00000521403 PABPN1Q86U42 306 aaKnown RBP eCLIP40.95■■■■■ 4.15
CERNA3-201ENST00000521403 UNC13AQ9UPW8 1703 aa40.88■■■■■ 4.13
CERNA3-201ENST00000521403 ZCCHC6Q5VYS8 1495 aaKnown RBP40.78■■■■■ 4.12
CERNA3-201ENST00000521403 BICRAQ9NZM4 1560 aa40.59■■■■■ 4.09
CERNA3-201ENST00000521403 DCAF1Q9Y4B6 1507 aa40.58■■■■■ 4.09
CERNA3-201ENST00000521403 SCRIBQ14160 1630 aa40.2■■■■■ 4.03
CERNA3-201ENST00000521403 SHROOM4Q9ULL8 1493 aa40.05■■■■■ 4
CERNA3-201ENST00000521403 CC2D2AQ9P2K1 1620 aa39.66■■■■□ 3.94
CERNA3-201ENST00000521403 EIF4G1Q04637 1599 aaKnown RBP39.62■■■■□ 3.93
CERNA3-201ENST00000521403 CECR2Q9BXF3 1484 aa39.54■■■■□ 3.92
CERNA3-201ENST00000521403 NCAPD3P42695 1498 aa38.39■■■■□ 3.74
CERNA3-201ENST00000521403 SMARCA4P51532 1647 aa38.32■■■■□ 3.73
CERNA3-201ENST00000521403 ATAD2BQ9ULI0 1458 aa38.32■■■■□ 3.72
CERNA3-201ENST00000521403 SMARCA2P51531 1590 aa38.22■■■■□ 3.71
CERNA3-201ENST00000521403 BAZ1AQ9NRL2 1556 aaPredicted RBP38.16■■■■□ 3.7
CERNA3-201ENST00000521403 HMGXB3Q12766 1538 aa38.12■■■■□ 3.69
CERNA3-201ENST00000521403 BAZ1BQ9UIG0 1483 aaKnown RBP37.98■■■■□ 3.67
CERNA3-201ENST00000521403 ERCC6Q03468 1493 aa37.94■■■■□ 3.66
CERNA3-201ENST00000521403 PEG3Q9GZU2 1588 aa37.91■■■■□ 3.66
CERNA3-201ENST00000521403 MROH2BQ7Z745 1585 aa37.89■■■■□ 3.66
CERNA3-201ENST00000521403 NESP48681 1621 aa37.77■■■■□ 3.64
CERNA3-201ENST00000521403 CUX2O14529 1486 aa37.74■■■■□ 3.63
CERNA3-201ENST00000521403 DNAJC5Q9H3Z4 198 aa37.54■■■■□ 3.6
CERNA3-201ENST00000521403 LAMC3Q9Y6N6 1575 aa37.51■■■■□ 3.59
CERNA3-201ENST00000521403 WIZO95785 1651 aa37.46■■■■□ 3.59
CERNA3-201ENST00000521403 THOC2Q8NI27 1593 aaKnown RBP37.32■■■■□ 3.56
CERNA3-201ENST00000521403 PDS5BQ9NTI5 1447 aa37.31■■■■□ 3.56
CERNA3-201ENST00000521403 KIF21AQ7Z4S6 1674 aa37.28■■■■□ 3.56
CERNA3-201ENST00000521403 CADPSQ9ULU8 1353 aa37.26■■■■□ 3.55
CERNA3-201ENST00000521403 RSF1Q96T23 1441 aaPredicted RBP37.18■■■■□ 3.54
CERNA3-201ENST00000521403 TOP2AP11388 1531 aaKnown RBP36.99■■■■□ 3.51
CERNA3-201ENST00000521403 MRC2Q9UBG0 1479 aa36.98■■■■□ 3.51
CERNA3-201ENST00000521403 CEP164Q9UPV0 1460 aa36.88■■■■□ 3.49
CERNA3-201ENST00000521403 WDR62O43379 1518 aa36.86■■■■□ 3.49
CERNA3-201ENST00000521403 CFTRP13569 1480 aa36.85■■■■□ 3.49
CERNA3-201ENST00000521403 FANCD2Q9BXW9 1451 aa36.85■■■■□ 3.49
CERNA3-201ENST00000521403 CCDC88BA6NC98 1476 aa36.57■■■■□ 3.45
CERNA3-201ENST00000521403 URB2Q14146 1524 aaKnown RBP36.52■■■■□ 3.44
CERNA3-201ENST00000521403 PRDM2Q13029 1718 aa36.48■■■■□ 3.43
CERNA3-201ENST00000521403 TOPBP1Q92547 1522 aa36.16■■■■□ 3.38
CERNA3-201ENST00000521403 IFT140Q96RY7 1462 aa36.11■■■■□ 3.37
CERNA3-201ENST00000521403 OSCARQ8IYS5 282 aa36.09■■■■□ 3.37
CERNA3-201ENST00000521403 ABCC8Q09428 1581 aa36.08■■■■□ 3.37
CERNA3-201ENST00000521403 TRIM41Q8WV44 630 aa36.06■■■■□ 3.36
CERNA3-201ENST00000521403 ZNF608Q9ULD9 1512 aaPredicted RBP36.06■■■■□ 3.36
CERNA3-201ENST00000521403 DNMBPQ6XZF7 1577 aa36.03■■■■□ 3.36
CERNA3-201ENST00000521403 EIF4G3O43432 1585 aaKnown RBP35.86■■■■□ 3.33
CERNA3-201ENST00000521403 POLA1P09884 1462 aaPredicted RBP35.8■■■■□ 3.32
CERNA3-201ENST00000521403 TARBP1Q13395 1621 aaKnown RBP35.79■■■■□ 3.32
CERNA3-201ENST00000521403 AQRO60306 1485 aaKnown RBP eCLIP35.76■■■■□ 3.32
CERNA3-201ENST00000521403 SUPT5HO00267 1087 aaKnown RBP35.75■■■■□ 3.31
CERNA3-201ENST00000521403 RAD54L2Q9Y4B4 1467 aa35.69■■■■□ 3.3
CERNA3-201ENST00000521403 SOGA1O94964 1423 aa35.66■■■■□ 3.3
CERNA3-201ENST00000521403 FGD5Q6ZNL6 1462 aa35.62■■■■□ 3.29
CERNA3-201ENST00000521403 CUX1P39880 1505 aa35.6■■■■□ 3.29
CERNA3-201ENST00000521403 TDRD9Q8NDG6 1382 aaKnown RBP35.58■■■■□ 3.29
CERNA3-201ENST00000521403 RIMBP3CA6NJZ7 1639 aa35.57■■■■□ 3.29
CERNA3-201ENST00000521403 RIMBP3BA6NNM3 1639 aa35.57■■■■□ 3.29
CERNA3-201ENST00000521403 RIMBP3Q9UFD9 1639 aa35.57■■■■□ 3.29
CERNA3-201ENST00000521403 CHD1O14646 1710 aa35.56■■■■□ 3.28
CERNA3-201ENST00000521403 FBLN2P98095 1184 aa35.55■■■■□ 3.28
CERNA3-201ENST00000521403 ARHGEF11O15085 1522 aa35.49■■■■□ 3.27
CERNA3-201ENST00000521403 WDR97A6NE52 1622 aa35.43■■■■□ 3.26
CERNA3-201ENST00000521403 SNAPC4Q5SXM2 1469 aa35.41■■■■□ 3.26
CERNA3-201ENST00000521403 GRIN2BQ13224 1484 aa35.32■■■■□ 3.24
CERNA3-201ENST00000521403 MAGI1Q96QZ7 1491 aaPredicted RBP35.29■■■■□ 3.24
CERNA3-201ENST00000521403 CHMP7Q8WUX9 453 aaPredicted RBP35.29■■■■□ 3.24
CERNA3-201ENST00000521403 CYB5RLQ6IPT4 315 aa35.27■■■■□ 3.24
CERNA3-201ENST00000521403 GAPVD1Q14C86 1478 aa35.22■■■■□ 3.23
CERNA3-201ENST00000521403 ABCA10Q8WWZ4 1543 aa35.19■■■■□ 3.22
CERNA3-201ENST00000521403 PBRM1Q86U86 1689 aa35.18■■■■□ 3.22
CERNA3-201ENST00000521403 SYNJ2O15056 1496 aa35.18■■■■□ 3.22
CERNA3-201ENST00000521403 SYNJ1O43426 1573 aa35.16■■■■□ 3.22
CERNA3-201ENST00000521403 ARAP1Q96P48 1450 aa35.16■■■■□ 3.22
CERNA3-201ENST00000521403 CLASP1Q7Z460 1538 aa35.13■■■■□ 3.21
CERNA3-201ENST00000521403 ABCA5Q8WWZ7 1642 aa35.12■■■■□ 3.21
CERNA3-201ENST00000521403 WRNQ14191 1432 aaPredicted RBP eCLIP35.12■■■■□ 3.21
CERNA3-201ENST00000521403 TOP2BQ02880 1626 aa35.06■■■■□ 3.2
CERNA3-201ENST00000521403 BIVM-ERCC5R4GMW8 1640 aa35.05■■■■□ 3.2
CERNA3-201ENST00000521403 GRIN2AQ12879 1464 aa34.87■■■■□ 3.17
CERNA3-201ENST00000521403 ADAMTS12P58397 1594 aa34.87■■■■□ 3.17
CERNA3-201ENST00000521403 TRHP20396 242 aaPredicted RBP34.85■■■■□ 3.17
CERNA3-201ENST00000521403 FHAD1B1AJZ9 1412 aa34.78■■■■□ 3.16
CERNA3-201ENST00000521403 ERICH3Q5RHP9 1530 aa34.76■■■■□ 3.16
CERNA3-201ENST00000521403 CEP170Q5SW79 1584 aa34.73■■■■□ 3.15
CERNA3-201ENST00000521403 NUP160Q12769 1436 aa34.72■■■■□ 3.15
CERNA3-201ENST00000521403 ERCC6L2Q5T890 1561 aa34.62■■■■□ 3.13
CERNA3-201ENST00000521403 SHROOM2Q13796 1616 aa34.52■■■■□ 3.12
CERNA3-201ENST00000521403 KIF27Q86VH2 1401 aa34.42■■■■□ 3.1
CERNA3-201ENST00000521403 PRG4Q92954 1404 aaPredicted RBP34.41■■■■□ 3.1
CERNA3-201ENST00000521403 JPH4Q96JJ6 628 aa34.4■■■■□ 3.1
CERNA3-201ENST00000521403 IGF1RP08069 1367 aa34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms