RNA–Protein interactions for RNA: ENST00000392521.6

CIT-203, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CIT, Length 8,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-203ENST00000392521 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
CIT-203ENST00000392521 PELP1Q8IZL8 1130 aaKnown RBP19.28■□□□□ 0.68
CIT-203ENST00000392521 EHMT2Q96KQ7 1210 aa18.95■□□□□ 0.62
CIT-203ENST00000392521 SUPT5HO00267 1087 aaKnown RBP18.94■□□□□ 0.62
CIT-203ENST00000392521 APLP2Q06481 763 aa18.67■□□□□ 0.58
CIT-203ENST00000392521 ERICH6Q7L0X2 663 aa18.63■□□□□ 0.57
CIT-203ENST00000392521 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
CIT-203ENST00000392521 SHROOM4Q9ULL8 1493 aa18.45■□□□□ 0.54
CIT-203ENST00000392521 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
CIT-203ENST00000392521 TTBK1Q5TCY1 1321 aaPredicted RBP18.31■□□□□ 0.52
CIT-203ENST00000392521 ATP1B4Q9UN42 357 aaPredicted RBP18.12■□□□□ 0.49
CIT-203ENST00000392521 RANGAP1P46060 587 aaPredicted RBP18.08■□□□□ 0.48
CIT-203ENST00000392521 CENPBP07199 599 aaPredicted RBP18.07■□□□□ 0.48
CIT-203ENST00000392521 PCGF6Q9BYE7 350 aa18.06■□□□□ 0.48
CIT-203ENST00000392521 NEFLP07196 543 aa17.96■□□□□ 0.47
CIT-203ENST00000392521 MYT1Q01538 1121 aa17.9■□□□□ 0.46
CIT-203ENST00000392521 DAXXQ9UER7 740 aaPredicted RBP17.8■□□□□ 0.44
CIT-203ENST00000392521 YTHDC1Q96MU7 727 aaKnown RBP17.72■□□□□ 0.43
CIT-203ENST00000392521 ZEB1P37275 1124 aaPredicted RBP17.69■□□□□ 0.42
CIT-203ENST00000392521 MYT1LQ9UL68 1186 aa17.65■□□□□ 0.42
CIT-203ENST00000392521 UBTFP17480 764 aaKnown RBP17.59■□□□□ 0.41
CIT-203ENST00000392521 NISCHQ9Y2I1 1504 aa17.58■□□□□ 0.4
CIT-203ENST00000392521 POLR3GLQ9BT43 218 aa17.53■□□□□ 0.4
CIT-203ENST00000392521 TRIM41Q8WV44 630 aa17.49■□□□□ 0.39
CIT-203ENST00000392521 CHIC1Q5VXU3 224 aa17.45■□□□□ 0.38
CIT-203ENST00000392521 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
CIT-203ENST00000392521 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
CIT-203ENST00000392521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
CIT-203ENST00000392521 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.36
CIT-203ENST00000392521 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
CIT-203ENST00000392521 CLSPNQ9HAW4 1339 aa17.27■□□□□ 0.36
CIT-203ENST00000392521 PPARGC1BQ86YN6 1023 aaKnown RBP17.26■□□□□ 0.35
CIT-203ENST00000392521 ITGAEP38570 1179 aa17.24■□□□□ 0.35
CIT-203ENST00000392521 RTL5Q5HYW3 569 aaPredicted RBP17.15■□□□□ 0.34
CIT-203ENST00000392521 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
CIT-203ENST00000392521 ZBTB47Q9UFB7 747 aaPredicted RBP16.97■□□□□ 0.31
CIT-203ENST00000392521 BCL11AQ9H165 835 aa16.89■□□□□ 0.3
CIT-203ENST00000392521 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
CIT-203ENST00000392521 HRCP23327 699 aa16.75■□□□□ 0.27
CIT-203ENST00000392521 BCANQ96GW7 911 aa16.71■□□□□ 0.27
CIT-203ENST00000392521 CANXP27824 592 aaKnown RBP16.7■□□□□ 0.26
CIT-203ENST00000392521 FAM50AQ14320 339 aaKnown RBP16.69■□□□□ 0.26
CIT-203ENST00000392521 TRIM52Q96A61 297 aa16.69■□□□□ 0.26
CIT-203ENST00000392521 NEFMP07197 916 aa16.64■□□□□ 0.25
CIT-203ENST00000392521 CDK11AQ9UQ88 783 aaPredicted RBP16.61■□□□□ 0.25
CIT-203ENST00000392521 NEUROD1Q13562 356 aa16.6■□□□□ 0.25
CIT-203ENST00000392521 DIEXFQ68CQ4 756 aaKnown RBP16.59■□□□□ 0.25
CIT-203ENST00000392521 ZNF326Q5BKZ1 582 aaKnown RBP16.58■□□□□ 0.25
CIT-203ENST00000392521 ANP32CO43423 234 aa16.5■□□□□ 0.23
CIT-203ENST00000392521 ANP32BQ92688 251 aaKnown RBP16.5■□□□□ 0.23
CIT-203ENST00000392521 LOC105371045A0A1W2PR82 267 aa16.46■□□□□ 0.23
CIT-203ENST00000392521 HSP90AA1P07900 732 aaKnown RBP16.44■□□□□ 0.22
CIT-203ENST00000392521 ANP32AP39687 249 aaKnown RBP16.4■□□□□ 0.22
CIT-203ENST00000392521 FBLN2P98095 1184 aa16.37■□□□□ 0.21
CIT-203ENST00000392521 EIF5BO60841 1220 aaKnown RBP16.36■□□□□ 0.21
CIT-203ENST00000392521 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
CIT-203ENST00000392521 PLPPR3Q6T4P5 718 aa16.32■□□□□ 0.2
CIT-203ENST00000392521 CDK11BP21127 795 aaKnown RBP16.3■□□□□ 0.2
CIT-203ENST00000392521 ESF1Q9H501 851 aaKnown RBP16.3■□□□□ 0.2
CIT-203ENST00000392521 UPF2Q9HAU5 1272 aaKnown RBP16.25■□□□□ 0.19
CIT-203ENST00000392521 GTF3C3Q9Y5Q9 886 aa16.25■□□□□ 0.19
CIT-203ENST00000392521 STAG3Q9UJ98 1225 aa16.23■□□□□ 0.19
CIT-203ENST00000392521 GLIPR1L2Q4G1C9 344 aa16.2■□□□□ 0.18
CIT-203ENST00000392521 A0A0G2JS52 829 aa16.16■□□□□ 0.18
CIT-203ENST00000392521 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
CIT-203ENST00000392521 ARXQ96QS3 562 aa16.12■□□□□ 0.17
CIT-203ENST00000392521 CHGAP10645 457 aaKnown RBP16.12■□□□□ 0.17
CIT-203ENST00000392521 ARID3CA6NKF2 412 aa16.11■□□□□ 0.17
CIT-203ENST00000392521 ZNF777Q9ULD5 760 aaPredicted RBP16.1■□□□□ 0.17
CIT-203ENST00000392521 SALL2Q9Y467 1007 aaPredicted RBP16.02■□□□□ 0.16
CIT-203ENST00000392521 TULP1O00294 542 aaPredicted RBP16.01■□□□□ 0.15
CIT-203ENST00000392521 P3H3Q8IVL6 736 aa16■□□□□ 0.15
CIT-203ENST00000392521 NBR1Q14596 966 aa15.98■□□□□ 0.15
CIT-203ENST00000392521 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.97■□□□□ 0.15
CIT-203ENST00000392521 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
CIT-203ENST00000392521 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
CIT-203ENST00000392521 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
CIT-203ENST00000392521 FKBP8Q14318 412 aa15.93■□□□□ 0.14
CIT-203ENST00000392521 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
CIT-203ENST00000392521 FAM9BQ8IZU0 186 aa15.91■□□□□ 0.14
CIT-203ENST00000392521 WDR43Q15061 677 aaKnown RBP eCLIP15.88■□□□□ 0.13
CIT-203ENST00000392521 HNRNPUQ00839 825 aaKnown RBP eCLIP15.88■□□□□ 0.13
CIT-203ENST00000392521 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
CIT-203ENST00000392521 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
CIT-203ENST00000392521 TMC1Q8TDI8 760 aa15.86■□□□□ 0.13
CIT-203ENST00000392521 C14orf37Q86TY3 774 aa15.86■□□□□ 0.13
CIT-203ENST00000392521 CCDC136Q96JN2 1154 aa15.85■□□□□ 0.13
CIT-203ENST00000392521 TONSLQ96HA7 1378 aa15.83■□□□□ 0.13
CIT-203ENST00000392521 ZRSR1Q15695 479 aaKnown RBP15.83■□□□□ 0.12
CIT-203ENST00000392521 TRIM44Q96DX7 344 aaPredicted RBP15.83■□□□□ 0.12
CIT-203ENST00000392521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.122e-8■■■□□ 17.2
CIT-203ENST00000392521 NCBP3Q53F19 620 aaKnown RBP15.79■□□□□ 0.12
CIT-203ENST00000392521 TNNT2P45379 298 aaPredicted RBP15.79■□□□□ 0.12
CIT-203ENST00000392521 HAP1P54257 671 aaPredicted RBP15.77■□□□□ 0.12
CIT-203ENST00000392521 TPRNQ4KMQ1 711 aa15.76■□□□□ 0.11
CIT-203ENST00000392521 SENP3Q9H4L4 574 aaPredicted RBP15.75■□□□□ 0.11
CIT-203ENST00000392521 ACIN1Q9UKV3 1341 aaKnown RBP15.74■□□□□ 0.11
CIT-203ENST00000392521 DNTTIP2Q5QJE6 756 aaKnown RBP15.74■□□□□ 0.11
CIT-203ENST00000392521 ABCC9O60706 1549 aa15.73■□□□□ 0.11
CIT-203ENST00000392521 NPHP1O15259 732 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms