RNA–Protein interactions for RNA: ENST00000334295.8

TPGS2-201, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPGS2, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-201ENST00000334295 NISCHQ9Y2I1 1504 aa29.99■■■□□ 2.39
TPGS2-201ENST00000334295 SHROOM4Q9ULL8 1493 aa26.83■■□□□ 1.89
TPGS2-201ENST00000334295 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
TPGS2-201ENST00000334295 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
TPGS2-201ENST00000334295 ZCCHC6Q5VYS8 1495 aaKnown RBP25.3■■□□□ 1.64
TPGS2-201ENST00000334295 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
TPGS2-201ENST00000334295 PCGF6Q9BYE7 350 aa25.16■■□□□ 1.62
TPGS2-201ENST00000334295 MYO15BQ96JP2 1530 aa25.14■■□□□ 1.62
TPGS2-201ENST00000334295 LOC105371045A0A1W2PR82 267 aa24.95■■□□□ 1.58
TPGS2-201ENST00000334295 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
TPGS2-201ENST00000334295 HRCP23327 699 aa24.85■■□□□ 1.57
TPGS2-201ENST00000334295 PPARGC1BQ86YN6 1023 aaKnown RBP24.81■■□□□ 1.56
TPGS2-201ENST00000334295 EHMT2Q96KQ7 1210 aa24.81■■□□□ 1.56
TPGS2-201ENST00000334295 FAM9AQ8IZU1 332 aaPredicted RBP24.62■■□□□ 1.53
TPGS2-201ENST00000334295 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
TPGS2-201ENST00000334295 SCRIBQ14160 1630 aa24.2■■□□□ 1.46
TPGS2-201ENST00000334295 TRIM26Q12899 539 aaPredicted RBP24.19■■□□□ 1.46
TPGS2-201ENST00000334295 DCAF1Q9Y4B6 1507 aa24.11■■□□□ 1.45
TPGS2-201ENST00000334295 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
TPGS2-201ENST00000334295 ABCC9O60706 1549 aa23.98■■□□□ 1.43
TPGS2-201ENST00000334295 TTBK1Q5TCY1 1321 aaPredicted RBP23.98■■□□□ 1.43
TPGS2-201ENST00000334295 RB1CC1Q8TDY2 1594 aa23.83■■□□□ 1.41
TPGS2-201ENST00000334295 CECR2Q9BXF3 1484 aa23.73■■□□□ 1.39
TPGS2-201ENST00000334295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.61■■□□□ 1.37
TPGS2-201ENST00000334295 ZEB1P37275 1124 aaPredicted RBP23.59■■□□□ 1.37
TPGS2-201ENST00000334295 MROH2BQ7Z745 1585 aa23.53■■□□□ 1.36
TPGS2-201ENST00000334295 CCER1Q8TC90 406 aaPredicted RBP23.52■■□□□ 1.36
TPGS2-201ENST00000334295 WIZO95785 1651 aa23.41■■□□□ 1.34
TPGS2-201ENST00000334295 RANGAP1P46060 587 aaPredicted RBP23.33■■□□□ 1.33
TPGS2-201ENST00000334295 UBTFP17480 764 aaKnown RBP23.33■■□□□ 1.32
TPGS2-201ENST00000334295 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
TPGS2-201ENST00000334295 NACADO15069 1562 aa23.25■■□□□ 1.31
TPGS2-201ENST00000334295 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
TPGS2-201ENST00000334295 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
TPGS2-201ENST00000334295 CCDC88BA6NC98 1476 aa23.09■■□□□ 1.29
TPGS2-201ENST00000334295 SOGA1O94964 1423 aa23.05■■□□□ 1.28
TPGS2-201ENST00000334295 HNRNPUL2Q1KMD3 747 aaKnown RBP23.04■■□□□ 1.28
TPGS2-201ENST00000334295 DIEXFQ68CQ4 756 aaKnown RBP23.01■■□□□ 1.27
TPGS2-201ENST00000334295 BAZ1AQ9NRL2 1556 aaPredicted RBP22.99■■□□□ 1.27
TPGS2-201ENST00000334295 CSRNP3Q8WYN3 585 aa22.98■■□□□ 1.27
TPGS2-201ENST00000334295 YTHDC1Q96MU7 727 aaKnown RBP22.98■■□□□ 1.27
TPGS2-201ENST00000334295 CEP162Q5TB80 1403 aa22.96■■□□□ 1.27
TPGS2-201ENST00000334295 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
TPGS2-201ENST00000334295 NEUROD1Q13562 356 aa22.93■■□□□ 1.26
TPGS2-201ENST00000334295 ACIN1Q9UKV3 1341 aaKnown RBP22.81■■□□□ 1.24
TPGS2-201ENST00000334295 APLP2Q06481 763 aa22.8■■□□□ 1.24
TPGS2-201ENST00000334295 GTF3C3Q9Y5Q9 886 aa22.8■■□□□ 1.24
TPGS2-201ENST00000334295 TOP2AP11388 1531 aaKnown RBP22.79■■□□□ 1.24
TPGS2-201ENST00000334295 SMARCA4P51532 1647 aa22.76■■□□□ 1.23
TPGS2-201ENST00000334295 CENPBP07199 599 aaPredicted RBP22.74■■□□□ 1.23
TPGS2-201ENST00000334295 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
TPGS2-201ENST00000334295 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
TPGS2-201ENST00000334295 EIF4G1Q04637 1599 aaKnown RBP22.68■■□□□ 1.22
TPGS2-201ENST00000334295 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
TPGS2-201ENST00000334295 ZNF316A6NFI3 1004 aaPredicted RBP22.63■■□□□ 1.21
TPGS2-201ENST00000334295 GOLGA3Q08378 1498 aa22.58■■□□□ 1.21
TPGS2-201ENST00000334295 PELP1Q8IZL8 1130 aaKnown RBP22.56■■□□□ 1.2
TPGS2-201ENST00000334295 ITGAEP38570 1179 aa22.55■■□□□ 1.2
TPGS2-201ENST00000334295 CLIP1P30622 1438 aa22.53■■□□□ 1.2
TPGS2-201ENST00000334295 MIER1Q8N108 512 aa22.51■■□□□ 1.19
TPGS2-201ENST00000334295 UNC13AQ9UPW8 1703 aa22.5■■□□□ 1.19
TPGS2-201ENST00000334295 EEA1Q15075 1411 aa22.47■■□□□ 1.19
TPGS2-201ENST00000334295 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.17
TPGS2-201ENST00000334295 RAPGEF2Q9Y4G8 1499 aa22.39■■□□□ 1.17
TPGS2-201ENST00000334295 SYNJ1O43426 1573 aa22.39■■□□□ 1.17
TPGS2-201ENST00000334295 BAZ1BQ9UIG0 1483 aaKnown RBP22.36■■□□□ 1.17
TPGS2-201ENST00000334295 ATP1B4Q9UN42 357 aaPredicted RBP22.31■■□□□ 1.16
TPGS2-201ENST00000334295 BICRAQ9NZM4 1560 aa22.3■■□□□ 1.16
TPGS2-201ENST00000334295 KANK4Q5T7N3 995 aaPredicted RBP22.28■■□□□ 1.16
TPGS2-201ENST00000334295 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
TPGS2-201ENST00000334295 VPS8Q8N3P4 1428 aa22.27■■□□□ 1.16
TPGS2-201ENST00000334295 P3H3Q8IVL6 736 aa22.15■■□□□ 1.14
TPGS2-201ENST00000334295 KIF21BO75037 1637 aa22.1■■□□□ 1.13
TPGS2-201ENST00000334295 FAM50AQ14320 339 aaKnown RBP22.03■■□□□ 1.12
TPGS2-201ENST00000334295 DHX57Q6P158 1386 aaKnown RBP21.98■■□□□ 1.11
TPGS2-201ENST00000334295 HIRIP3Q9BW71 556 aaPredicted RBP21.96■■□□□ 1.11
TPGS2-201ENST00000334295 PEG3Q9GZU2 1588 aa21.95■■□□□ 1.1
TPGS2-201ENST00000334295 ARAP1Q96P48 1450 aa21.94■■□□□ 1.1
TPGS2-201ENST00000334295 KIF27Q86VH2 1401 aa21.91■■□□□ 1.1
TPGS2-201ENST00000334295 KCNH8Q96L42 1107 aa21.9■■□□□ 1.1
TPGS2-201ENST00000334295 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
TPGS2-201ENST00000334295 BCANQ96GW7 911 aa21.88■■□□□ 1.09
TPGS2-201ENST00000334295 SIN3AQ96ST3 1273 aa21.86■■□□□ 1.09
TPGS2-201ENST00000334295 CCNB3Q8WWL7 1395 aa21.84■■□□□ 1.09
TPGS2-201ENST00000334295 CUX1P39880 1505 aa21.83■■□□□ 1.08
TPGS2-201ENST00000334295 PRXQ9BXM0 1461 aa21.83■■□□□ 1.08
TPGS2-201ENST00000334295 DDX10Q13206 875 aaKnown RBP21.82■■□□□ 1.08
TPGS2-201ENST00000334295 CUX2O14529 1486 aa21.81■■□□□ 1.08
TPGS2-201ENST00000334295 RAB3GAP2Q9H2M9 1393 aa21.75■■□□□ 1.07
TPGS2-201ENST00000334295 ARHGAP35Q9NRY4 1499 aa21.74■■□□□ 1.07
TPGS2-201ENST00000334295 SUPT16HQ9Y5B9 1047 aaKnown RBP21.73■■□□□ 1.07
TPGS2-201ENST00000334295 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
TPGS2-201ENST00000334295 CARMIL1Q5VZK9 1371 aa21.68■■□□□ 1.06
TPGS2-201ENST00000334295 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
TPGS2-201ENST00000334295 IGF1RP08069 1367 aa21.66■■□□□ 1.06
TPGS2-201ENST00000334295 ARID3CA6NKF2 412 aa21.65■■□□□ 1.06
TPGS2-201ENST00000334295 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
TPGS2-201ENST00000334295 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
TPGS2-201ENST00000334295 TRIM52Q96A61 297 aa21.63■■□□□ 1.05
TPGS2-201ENST00000334295 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms