RNA–Protein interactions for RNA: ENST00000341928.6

EPB41L3-201, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EPB41L3, Length 4,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-201ENST00000341928 NISCHQ9Y2I1 1504 aa29.14■■■□□ 2.25
EPB41L3-201ENST00000341928 DCAF8L2P0C7V8 631 aa26.49■■□□□ 1.83
EPB41L3-201ENST00000341928 SHROOM4Q9ULL8 1493 aa26.07■■□□□ 1.76
EPB41L3-201ENST00000341928 SUPT5HO00267 1087 aaKnown RBP25.89■■□□□ 1.74
EPB41L3-201ENST00000341928 ZCCHC6Q5VYS8 1495 aaKnown RBP24.41■■□□□ 1.5
EPB41L3-201ENST00000341928 CCDC180Q9P1Z9 1646 aa24.34■■□□□ 1.49
EPB41L3-201ENST00000341928 CHIC1Q5VXU3 224 aa24.25■■□□□ 1.47
EPB41L3-201ENST00000341928 EHMT2Q96KQ7 1210 aa24.25■■□□□ 1.47
EPB41L3-201ENST00000341928 FAM9AQ8IZU1 332 aaPredicted RBP24.13■■□□□ 1.45
EPB41L3-201ENST00000341928 PCGF6Q9BYE7 350 aa24.08■■□□□ 1.45
EPB41L3-201ENST00000341928 TRIM41Q8WV44 630 aa24.04■■□□□ 1.44
EPB41L3-201ENST00000341928 ABCC9O60706 1549 aa23.92■■□□□ 1.42
EPB41L3-201ENST00000341928 LOC105371045A0A1W2PR82 267 aa23.82■■□□□ 1.4
EPB41L3-201ENST00000341928 SCRIBQ14160 1630 aa23.55■■□□□ 1.36
EPB41L3-201ENST00000341928 DCAF1Q9Y4B6 1507 aa23.48■■□□□ 1.35
EPB41L3-201ENST00000341928 HRCP23327 699 aa23.44■■□□□ 1.34
EPB41L3-201ENST00000341928 TTBK1Q5TCY1 1321 aaPredicted RBP23.4■■□□□ 1.34
EPB41L3-201ENST00000341928 TRIM26Q12899 539 aaPredicted RBP23.39■■□□□ 1.34
EPB41L3-201ENST00000341928 MYO15BQ96JP2 1530 aa23.29■■□□□ 1.32
EPB41L3-201ENST00000341928 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
EPB41L3-201ENST00000341928 PPARGC1BQ86YN6 1023 aaKnown RBP23.28■■□□□ 1.32
EPB41L3-201ENST00000341928 UBTFP17480 764 aaKnown RBP23.25■■□□□ 1.31
EPB41L3-201ENST00000341928 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
EPB41L3-201ENST00000341928 APLP2Q06481 763 aa23.18■■□□□ 1.3
EPB41L3-201ENST00000341928 ZEB1P37275 1124 aaPredicted RBP23.17■■□□□ 1.3
EPB41L3-201ENST00000341928 RANGAP1P46060 587 aaPredicted RBP23.14■■□□□ 1.29
EPB41L3-201ENST00000341928 NACADO15069 1562 aa23.04■■□□□ 1.28
EPB41L3-201ENST00000341928 CCER1Q8TC90 406 aaPredicted RBP23.04■■□□□ 1.28
EPB41L3-201ENST00000341928 RB1CC1Q8TDY2 1594 aa22.9■■□□□ 1.26
EPB41L3-201ENST00000341928 CECR2Q9BXF3 1484 aa22.87■■□□□ 1.25
EPB41L3-201ENST00000341928 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
EPB41L3-201ENST00000341928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.65■■□□□ 1.22
EPB41L3-201ENST00000341928 CSRNP3Q8WYN3 585 aa22.64■■□□□ 1.21
EPB41L3-201ENST00000341928 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
EPB41L3-201ENST00000341928 ATP1B4Q9UN42 357 aaPredicted RBP22.53■■□□□ 1.2
EPB41L3-201ENST00000341928 HNRNPUL2Q1KMD3 747 aaKnown RBP22.53■■□□□ 1.2
EPB41L3-201ENST00000341928 WIZO95785 1651 aa22.41■■□□□ 1.18
EPB41L3-201ENST00000341928 CENPBP07199 599 aaPredicted RBP22.31■■□□□ 1.16
EPB41L3-201ENST00000341928 ITGAEP38570 1179 aa22.28■■□□□ 1.16
EPB41L3-201ENST00000341928 CCDC88BA6NC98 1476 aa22.27■■□□□ 1.16
EPB41L3-201ENST00000341928 WRNQ14191 1432 aaPredicted RBP eCLIP22.21■■□□□ 1.15
EPB41L3-201ENST00000341928 BAZ1BQ9UIG0 1483 aaKnown RBP22.19■■□□□ 1.14
EPB41L3-201ENST00000341928 EEA1Q15075 1411 aa22.17■■□□□ 1.14
EPB41L3-201ENST00000341928 ABCC8Q09428 1581 aa22.17■■□□□ 1.14
EPB41L3-201ENST00000341928 CEP162Q5TB80 1403 aa22.17■■□□□ 1.14
EPB41L3-201ENST00000341928 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
EPB41L3-201ENST00000341928 YTHDC1Q96MU7 727 aaKnown RBP22.14■■□□□ 1.13
EPB41L3-201ENST00000341928 SOGA1O94964 1423 aa22.14■■□□□ 1.13
EPB41L3-201ENST00000341928 DIEXFQ68CQ4 756 aaKnown RBP22.14■■□□□ 1.13
EPB41L3-201ENST00000341928 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
EPB41L3-201ENST00000341928 TNIKQ9UKE5 1360 aa22.08■■□□□ 1.13
EPB41L3-201ENST00000341928 GOLGA3Q08378 1498 aa22.06■■□□□ 1.12
EPB41L3-201ENST00000341928 CLIP1P30622 1438 aa22.02■■□□□ 1.12
EPB41L3-201ENST00000341928 CEP164Q9UPV0 1460 aa21.92■■□□□ 1.1
EPB41L3-201ENST00000341928 P3H3Q8IVL6 736 aa21.91■■□□□ 1.1
EPB41L3-201ENST00000341928 FAM50AQ14320 339 aaKnown RBP21.91■■□□□ 1.1
EPB41L3-201ENST00000341928 ZNF316A6NFI3 1004 aaPredicted RBP21.87■■□□□ 1.09
EPB41L3-201ENST00000341928 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
EPB41L3-201ENST00000341928 ATAD2BQ9ULI0 1458 aa21.85■■□□□ 1.09
EPB41L3-201ENST00000341928 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
EPB41L3-201ENST00000341928 PELP1Q8IZL8 1130 aaKnown RBP21.8■■□□□ 1.08
EPB41L3-201ENST00000341928 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
EPB41L3-201ENST00000341928 NEUROD1Q13562 356 aa21.67■■□□□ 1.06
EPB41L3-201ENST00000341928 VPS8Q8N3P4 1428 aa21.59■■□□□ 1.05
EPB41L3-201ENST00000341928 ACIN1Q9UKV3 1341 aaKnown RBP21.59■■□□□ 1.05
EPB41L3-201ENST00000341928 GTF3C3Q9Y5Q9 886 aa21.57■■□□□ 1.04
EPB41L3-201ENST00000341928 RAPGEF2Q9Y4G8 1499 aa21.55■■□□□ 1.04
EPB41L3-201ENST00000341928 CUX2O14529 1486 aa21.51■■□□□ 1.03
EPB41L3-201ENST00000341928 BICRAQ9NZM4 1560 aa21.51■■□□□ 1.03
EPB41L3-201ENST00000341928 ARID3CA6NKF2 412 aa21.5■■□□□ 1.03
EPB41L3-201ENST00000341928 TRIM52Q96A61 297 aa21.46■■□□□ 1.03
EPB41L3-201ENST00000341928 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
EPB41L3-201ENST00000341928 KANK4Q5T7N3 995 aaPredicted RBP21.44■■□□□ 1.02
EPB41L3-201ENST00000341928 FBLN2P98095 1184 aa21.42■■□□□ 1.02
EPB41L3-201ENST00000341928 UNC13AQ9UPW8 1703 aa21.4■■□□□ 1.02
EPB41L3-201ENST00000341928 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.02
EPB41L3-201ENST00000341928 SYNJ1O43426 1573 aa21.39■■□□□ 1.01
EPB41L3-201ENST00000341928 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
EPB41L3-201ENST00000341928 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
EPB41L3-201ENST00000341928 NEFLP07196 543 aa21.37■■□□□ 1.01
EPB41L3-201ENST00000341928 MIER1Q8N108 512 aa21.37■■□□□ 1.01
EPB41L3-201ENST00000341928 EIF4G1Q04637 1599 aaKnown RBP21.33■■□□□ 1
EPB41L3-201ENST00000341928 MTUS2Q5JR59 1369 aa21.33■■□□□ 1
EPB41L3-201ENST00000341928 CCNB3Q8WWL7 1395 aa21.3■■□□□ 1
EPB41L3-201ENST00000341928 POLR3GLQ9BT43 218 aa21.26■□□□□ 0.99
EPB41L3-201ENST00000341928 CLSPNQ9HAW4 1339 aa21.22■□□□□ 0.99
EPB41L3-201ENST00000341928 CHIC2Q9UKJ5 165 aa21.22■□□□□ 0.99
EPB41L3-201ENST00000341928 FHAD1B1AJZ9 1412 aa21.22■□□□□ 0.99
EPB41L3-201ENST00000341928 PEG3Q9GZU2 1588 aa21.21■□□□□ 0.99
EPB41L3-201ENST00000341928 KIF21BO75037 1637 aa21.21■□□□□ 0.99
EPB41L3-201ENST00000341928 ANP32CO43423 234 aa21.19■□□□□ 0.98
EPB41L3-201ENST00000341928 CNGB1Q14028 1251 aaPredicted RBP21.19■□□□□ 0.98
EPB41L3-201ENST00000341928 TONSLQ96HA7 1378 aa21.18■□□□□ 0.98
EPB41L3-201ENST00000341928 DDX10Q13206 875 aaKnown RBP21.17■□□□□ 0.98
EPB41L3-201ENST00000341928 CDK11AQ9UQ88 783 aaPredicted RBP21.17■□□□□ 0.98
EPB41L3-201ENST00000341928 CFTRP13569 1480 aa21.16■□□□□ 0.98
EPB41L3-201ENST00000341928 IGF1RP08069 1367 aa21.15■□□□□ 0.98
EPB41L3-201ENST00000341928 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
EPB41L3-201ENST00000341928 ZNF777Q9ULD5 760 aaPredicted RBP21.14■□□□□ 0.97
EPB41L3-201ENST00000341928 TOP2BQ02880 1626 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms