Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01554Q52M75 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01554Q52M75 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01554Q52M75 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01554Q52M75 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LINC01554Q52M75 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LINC01554Q52M75 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01554Q52M75 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC01554Q52M75 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01554Q52M75 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01554Q52M75 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01554Q52M75 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01554Q52M75 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LINC01554Q52M75 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LINC01554Q52M75 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC15.96■□□□□ 0.15
LINC01554Q52M75 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LINC01554Q52M75 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC01554Q52M75 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC15.83■□□□□ 0.12
LINC01554Q52M75 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC01554Q52M75 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC01554Q52M75 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01554Q52M75 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
LINC01554Q52M75 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01554Q52M75 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01554Q52M75 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01554Q52M75 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC01554Q52M75 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LINC01554Q52M75 AL161658.1-201ENST00000623641 1967 ntBASIC15.63■□□□□ 0.09
LINC01554Q52M75 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
LINC01554Q52M75 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01554Q52M75 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01554Q52M75 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC01554Q52M75 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01554Q52M75 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01554Q52M75 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01554Q52M75 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LINC01554Q52M75 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LINC01554Q52M75 AC139426.1-201ENST00000568218 2529 ntBASIC15.36■□□□□ 0.05
LINC01554Q52M75 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC01554Q52M75 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC01554Q52M75 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC01554Q52M75 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINC01554Q52M75 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LINC01554Q52M75 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01554Q52M75 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01554Q52M75 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01554Q52M75 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01554Q52M75 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01554Q52M75 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01554Q52M75 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01554Q52M75 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
LINC01554Q52M75 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01554Q52M75 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LINC01554Q52M75 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC01554Q52M75 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01554Q52M75 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01554Q52M75 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC15□□□□□ -0.01
LINC01554Q52M75 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01554Q52M75 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LINC01554Q52M75 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01554Q52M75 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01554Q52M75 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01554Q52M75 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LINC01554Q52M75 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01554Q52M75 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01554Q52M75 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01554Q52M75 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01554Q52M75 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01554Q52M75 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01554Q52M75 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01554Q52M75 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01554Q52M75 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01554Q52M75 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
LINC01554Q52M75 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01554Q52M75 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01554Q52M75 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC01554Q52M75 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LINC01554Q52M75 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LINC01554Q52M75 ST7-202ENST00000323984 2142 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01554Q52M75 ST7-207ENST00000393449 2127 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC01554Q52M75 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01554Q52M75 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC01554Q52M75 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
LINC01554Q52M75 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC01554Q52M75 ST7-205ENST00000393446 2114 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC01554Q52M75 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC01554Q52M75 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LINC01554Q52M75 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LINC01554Q52M75 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC01554Q52M75 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01554Q52M75 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC01554Q52M75 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01554Q52M75 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01554Q52M75 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LINC01554Q52M75 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LINC01554Q52M75 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01554Q52M75 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01554Q52M75 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LINC01554Q52M75 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01554Q52M75 AL356512.1-201ENST00000607453 1739 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms