RNA–Protein interactions for RNA: ENST00000396344.4

HOXA10-202, Transcript of homeobox A10, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HOXA10, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10-202ENST00000396344 NISCHQ9Y2I1 1504 aa38.96■■■■□ 3.83
HOXA10-202ENST00000396344 CCDC180Q9P1Z9 1646 aa34.78■■■■□ 3.16
HOXA10-202ENST00000396344 ABCC9O60706 1549 aa34.18■■■■□ 3.06
HOXA10-202ENST00000396344 RB1CC1Q8TDY2 1594 aa32.86■■■□□ 2.85
HOXA10-202ENST00000396344 NACADO15069 1562 aa32.79■■■□□ 2.84
HOXA10-202ENST00000396344 MYO15BQ96JP2 1530 aa32.58■■■□□ 2.81
HOXA10-202ENST00000396344 DCAF8L2P0C7V8 631 aa32.53■■■□□ 2.8
HOXA10-202ENST00000396344 ZCCHC6Q5VYS8 1495 aaKnown RBP32.39■■■□□ 2.78
HOXA10-202ENST00000396344 DCAF1Q9Y4B6 1507 aa32.3■■■□□ 2.76
HOXA10-202ENST00000396344 UNC13AQ9UPW8 1703 aa32.02■■■□□ 2.72
HOXA10-202ENST00000396344 PABPN1Q86U42 306 aaKnown RBP eCLIP31.87■■■□□ 2.69
HOXA10-202ENST00000396344 BICRAQ9NZM4 1560 aa31.83■■■□□ 2.69
HOXA10-202ENST00000396344 SHROOM4Q9ULL8 1493 aa31.63■■■□□ 2.65
HOXA10-202ENST00000396344 DNAJC5BQ9UF47 199 aa31.61■■■□□ 2.65
HOXA10-202ENST00000396344 SCRIBQ14160 1630 aa31.59■■■□□ 2.65
HOXA10-202ENST00000396344 EIF4G1Q04637 1599 aaKnown RBP31.02■■■□□ 2.56
HOXA10-202ENST00000396344 CC2D2AQ9P2K1 1620 aa30.94■■■□□ 2.54
HOXA10-202ENST00000396344 CECR2Q9BXF3 1484 aa30.8■■■□□ 2.52
HOXA10-202ENST00000396344 SMARCA4P51532 1647 aa30.27■■■□□ 2.44
HOXA10-202ENST00000396344 NCAPD3P42695 1498 aa30.26■■■□□ 2.44
HOXA10-202ENST00000396344 BAZ1AQ9NRL2 1556 aaPredicted RBP30.23■■■□□ 2.43
HOXA10-202ENST00000396344 ATAD2BQ9ULI0 1458 aa30.19■■■□□ 2.42
HOXA10-202ENST00000396344 SMARCA2P51531 1590 aa30.17■■■□□ 2.42
HOXA10-202ENST00000396344 HMGXB3Q12766 1538 aa30.08■■■□□ 2.41
HOXA10-202ENST00000396344 PEG3Q9GZU2 1588 aa30.04■■■□□ 2.4
HOXA10-202ENST00000396344 MROH2BQ7Z745 1585 aa29.97■■■□□ 2.39
HOXA10-202ENST00000396344 BAZ1BQ9UIG0 1483 aaKnown RBP29.91■■■□□ 2.38
HOXA10-202ENST00000396344 WIZO95785 1651 aa29.6■■■□□ 2.33
HOXA10-202ENST00000396344 RSF1Q96T23 1441 aaPredicted RBP29.57■■■□□ 2.32
HOXA10-202ENST00000396344 ERCC6Q03468 1493 aa29.52■■■□□ 2.32
HOXA10-202ENST00000396344 NESP48681 1621 aa29.48■■■□□ 2.31
HOXA10-202ENST00000396344 LAMC3Q9Y6N6 1575 aa29.48■■■□□ 2.31
HOXA10-202ENST00000396344 SUPT5HO00267 1087 aaKnown RBP29.42■■■□□ 2.3
HOXA10-202ENST00000396344 CUX2O14529 1486 aa29.39■■■□□ 2.3
HOXA10-202ENST00000396344 CADPSQ9ULU8 1353 aa29.35■■■□□ 2.29
HOXA10-202ENST00000396344 TOP2AP11388 1531 aaKnown RBP29.35■■■□□ 2.29
HOXA10-202ENST00000396344 PDS5BQ9NTI5 1447 aa29.31■■■□□ 2.28
HOXA10-202ENST00000396344 THOC2Q8NI27 1593 aaKnown RBP29.15■■■□□ 2.26
HOXA10-202ENST00000396344 KIF21AQ7Z4S6 1674 aa29.13■■■□□ 2.25
HOXA10-202ENST00000396344 CFTRP13569 1480 aa29.12■■■□□ 2.25
HOXA10-202ENST00000396344 MRC2Q9UBG0 1479 aa28.98■■■□□ 2.23
HOXA10-202ENST00000396344 CCDC88BA6NC98 1476 aa28.98■■■□□ 2.23
HOXA10-202ENST00000396344 FANCD2Q9BXW9 1451 aa28.97■■■□□ 2.23
HOXA10-202ENST00000396344 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
HOXA10-202ENST00000396344 WDR62O43379 1518 aa28.91■■■□□ 2.22
HOXA10-202ENST00000396344 PRDM2Q13029 1718 aa28.83■■■□□ 2.21
HOXA10-202ENST00000396344 DNAJC5Q9H3Z4 198 aa28.77■■■□□ 2.2
HOXA10-202ENST00000396344 URB2Q14146 1524 aaKnown RBP28.68■■■□□ 2.18
HOXA10-202ENST00000396344 ABCC8Q09428 1581 aa28.55■■■□□ 2.16
HOXA10-202ENST00000396344 TOPBP1Q92547 1522 aa28.48■■■□□ 2.15
HOXA10-202ENST00000396344 DNMBPQ6XZF7 1577 aa28.43■■■□□ 2.14
HOXA10-202ENST00000396344 CHIC1Q5VXU3 224 aa28.41■■■□□ 2.14
HOXA10-202ENST00000396344 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
HOXA10-202ENST00000396344 POLA1P09884 1462 aaPredicted RBP28.21■■■□□ 2.11
HOXA10-202ENST00000396344 ZNF608Q9ULD9 1512 aaPredicted RBP28.21■■■□□ 2.11
HOXA10-202ENST00000396344 TARBP1Q13395 1621 aaKnown RBP28.18■■■□□ 2.1
HOXA10-202ENST00000396344 CUX1P39880 1505 aa28.14■■■□□ 2.09
HOXA10-202ENST00000396344 SOGA1O94964 1423 aa28.1■■■□□ 2.09
HOXA10-202ENST00000396344 EIF4G3O43432 1585 aaKnown RBP28.09■■■□□ 2.09
HOXA10-202ENST00000396344 OSCARQ8IYS5 282 aa28.09■■■□□ 2.09
HOXA10-202ENST00000396344 FGD5Q6ZNL6 1462 aa28.09■■■□□ 2.09
HOXA10-202ENST00000396344 RAD54L2Q9Y4B4 1467 aa28.05■■■□□ 2.08
HOXA10-202ENST00000396344 WDR97A6NE52 1622 aa28.04■■■□□ 2.08
HOXA10-202ENST00000396344 AQRO60306 1485 aaKnown RBP eCLIP28.03■■■□□ 2.08
HOXA10-202ENST00000396344 TDRD9Q8NDG6 1382 aaKnown RBP27.94■■■□□ 2.06
HOXA10-202ENST00000396344 WRNQ14191 1432 aaPredicted RBP eCLIP27.89■■■□□ 2.06
HOXA10-202ENST00000396344 ABCA10Q8WWZ4 1543 aa27.86■■■□□ 2.05
HOXA10-202ENST00000396344 TOP2BQ02880 1626 aa27.86■■■□□ 2.05
HOXA10-202ENST00000396344 BIVM-ERCC5R4GMW8 1640 aa27.85■■■□□ 2.05
HOXA10-202ENST00000396344 GRIN2BQ13224 1484 aa27.83■■■□□ 2.05
HOXA10-202ENST00000396344 MAGI1Q96QZ7 1491 aaPredicted RBP27.8■■■□□ 2.04
HOXA10-202ENST00000396344 CHD1O14646 1710 aa27.78■■■□□ 2.04
HOXA10-202ENST00000396344 GAPVD1Q14C86 1478 aa27.77■■■□□ 2.04
HOXA10-202ENST00000396344 SNAPC4Q5SXM2 1469 aa27.77■■■□□ 2.04
HOXA10-202ENST00000396344 SYNJ1O43426 1573 aa27.77■■■□□ 2.04
HOXA10-202ENST00000396344 TRIM41Q8WV44 630 aa27.76■■■□□ 2.03
HOXA10-202ENST00000396344 ABCA5Q8WWZ7 1642 aa27.73■■■□□ 2.03
HOXA10-202ENST00000396344 FBLN2P98095 1184 aa27.72■■■□□ 2.03
HOXA10-202ENST00000396344 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
HOXA10-202ENST00000396344 SYNJ2O15056 1496 aa27.68■■■□□ 2.02
HOXA10-202ENST00000396344 CHMP7Q8WUX9 453 aaPredicted RBP27.67■■■□□ 2.02
HOXA10-202ENST00000396344 RIMBP3CA6NJZ7 1639 aa27.6■■■□□ 2.01
HOXA10-202ENST00000396344 RIMBP3BA6NNM3 1639 aa27.6■■■□□ 2.01
HOXA10-202ENST00000396344 RIMBP3Q9UFD9 1639 aa27.6■■■□□ 2.01
HOXA10-202ENST00000396344 ARHGEF11O15085 1522 aa27.6■■■□□ 2.01
HOXA10-202ENST00000396344 CLASP1Q7Z460 1538 aa27.53■■■□□ 2
HOXA10-202ENST00000396344 ERICH3Q5RHP9 1530 aa27.53■■■□□ 2
HOXA10-202ENST00000396344 ADAMTS12P58397 1594 aa27.48■■□□□ 1.99
HOXA10-202ENST00000396344 FHAD1B1AJZ9 1412 aa27.47■■□□□ 1.99
HOXA10-202ENST00000396344 GRIN2AQ12879 1464 aa27.44■■□□□ 1.98
HOXA10-202ENST00000396344 NUP160Q12769 1436 aa27.37■■□□□ 1.97
HOXA10-202ENST00000396344 ARAP1Q96P48 1450 aa27.35■■□□□ 1.97
HOXA10-202ENST00000396344 KIF27Q86VH2 1401 aa27.35■■□□□ 1.97
HOXA10-202ENST00000396344 CYB5RLQ6IPT4 315 aa27.33■■□□□ 1.97
HOXA10-202ENST00000396344 CEP170Q5SW79 1584 aa27.28■■□□□ 1.96
HOXA10-202ENST00000396344 IGF1RP08069 1367 aa27.27■■□□□ 1.96
HOXA10-202ENST00000396344 EEA1Q15075 1411 aa27.26■■□□□ 1.95
HOXA10-202ENST00000396344 CUL7Q14999 1698 aa27.21■■□□□ 1.95
HOXA10-202ENST00000396344 LOC105371045A0A1W2PR82 267 aa27.2■■□□□ 1.94
HOXA10-202ENST00000396344 SHROOM2Q13796 1616 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms