RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 NISCHQ9Y2I1 1504 aa24.42■■□□□ 1.5
TUBGCP4-201ENST00000260383 HRCP23327 699 aa22.73■■□□□ 1.23
TUBGCP4-201ENST00000260383 PPARGC1BQ86YN6 1023 aaKnown RBP22.36■■□□□ 1.17
TUBGCP4-201ENST00000260383 PCGF6Q9BYE7 350 aa22.19■■□□□ 1.14
TUBGCP4-201ENST00000260383 PELP1Q8IZL8 1130 aaKnown RBP22.15■■□□□ 1.14
TUBGCP4-201ENST00000260383 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
TUBGCP4-201ENST00000260383 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
TUBGCP4-201ENST00000260383 MYO15BQ96JP2 1530 aa21.97■■□□□ 1.11
TUBGCP4-201ENST00000260383 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
TUBGCP4-201ENST00000260383 SCAF1Q9H7N4 1312 aaKnown RBP21.7■■□□□ 1.06
TUBGCP4-201ENST00000260383 DCAF1Q9Y4B6 1507 aa21.43■■□□□ 1.02
TUBGCP4-201ENST00000260383 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1
TUBGCP4-201ENST00000260383 LOC105371045A0A1W2PR82 267 aa21.31■■□□□ 1
TUBGCP4-201ENST00000260383 MYT1Q01538 1121 aa21.3■■□□□ 1
TUBGCP4-201ENST00000260383 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
TUBGCP4-201ENST00000260383 ZEB1P37275 1124 aaPredicted RBP21.16■□□□□ 0.98
TUBGCP4-201ENST00000260383 ACIN1Q9UKV3 1341 aaKnown RBP21.03■□□□□ 0.96
TUBGCP4-201ENST00000260383 NEUROD1Q13562 356 aa21.01■□□□□ 0.95
TUBGCP4-201ENST00000260383 GTF3C3Q9Y5Q9 886 aa20.91■□□□□ 0.94
TUBGCP4-201ENST00000260383 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
TUBGCP4-201ENST00000260383 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.9
TUBGCP4-201ENST00000260383 DIEXFQ68CQ4 756 aaKnown RBP20.54■□□□□ 0.88
TUBGCP4-201ENST00000260383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.48■□□□□ 0.87
TUBGCP4-201ENST00000260383 DCAF8L2P0C7V8 631 aa20.44■□□□□ 0.86
TUBGCP4-201ENST00000260383 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.85
TUBGCP4-201ENST00000260383 FAM9AQ8IZU1 332 aaPredicted RBP20.37■□□□□ 0.85
TUBGCP4-201ENST00000260383 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
TUBGCP4-201ENST00000260383 YTHDC1Q96MU7 727 aaKnown RBP20.29■□□□□ 0.84
TUBGCP4-201ENST00000260383 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
TUBGCP4-201ENST00000260383 BCL11AQ9H165 835 aa20.1■□□□□ 0.81
TUBGCP4-201ENST00000260383 ZNF316A6NFI3 1004 aaPredicted RBP20.06■□□□□ 0.8
TUBGCP4-201ENST00000260383 MIER1Q8N108 512 aa20.04■□□□□ 0.8
TUBGCP4-201ENST00000260383 TTBK1Q5TCY1 1321 aaPredicted RBP20.02■□□□□ 0.8
TUBGCP4-201ENST00000260383 ANP32EQ9BTT0 268 aa19.94■□□□□ 0.78
TUBGCP4-201ENST00000260383 ABCC9O60706 1549 aa19.88■□□□□ 0.77
TUBGCP4-201ENST00000260383 SUPT16HQ9Y5B9 1047 aaKnown RBP19.83■□□□□ 0.76
TUBGCP4-201ENST00000260383 TSHZ2Q9NRE2 1034 aa19.82■□□□□ 0.76
TUBGCP4-201ENST00000260383 RSF1Q96T23 1441 aaPredicted RBP19.81■□□□□ 0.76
TUBGCP4-201ENST00000260383 CSRNP3Q8WYN3 585 aa19.8■□□□□ 0.76
TUBGCP4-201ENST00000260383 RB1CC1Q8TDY2 1594 aa19.79■□□□□ 0.76
TUBGCP4-201ENST00000260383 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
TUBGCP4-201ENST00000260383 NACADO15069 1562 aa19.6■□□□□ 0.73
TUBGCP4-201ENST00000260383 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.72
TUBGCP4-201ENST00000260383 SCRIBQ14160 1630 aa19.53■□□□□ 0.72
TUBGCP4-201ENST00000260383 HNRNPUL2Q1KMD3 747 aaKnown RBP19.45■□□□□ 0.7
TUBGCP4-201ENST00000260383 CEP162Q5TB80 1403 aa19.45■□□□□ 0.7
TUBGCP4-201ENST00000260383 PRKCSHP14314 528 aaPredicted RBP19.44■□□□□ 0.7
TUBGCP4-201ENST00000260383 BCANQ96GW7 911 aa19.41■□□□□ 0.7
TUBGCP4-201ENST00000260383 RBM19Q9Y4C8 960 aaKnown RBP19.32■□□□□ 0.68
TUBGCP4-201ENST00000260383 KCNH8Q96L42 1107 aa19.26■□□□□ 0.67
TUBGCP4-201ENST00000260383 TNIKQ9UKE5 1360 aa19.26■□□□□ 0.67
TUBGCP4-201ENST00000260383 FKBP8Q14318 412 aa19.24■□□□□ 0.67
TUBGCP4-201ENST00000260383 MSH5O43196 834 aa19.22■□□□□ 0.67
TUBGCP4-201ENST00000260383 CCDC88BA6NC98 1476 aa19.2■□□□□ 0.66
TUBGCP4-201ENST00000260383 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
TUBGCP4-201ENST00000260383 UBTFP17480 764 aaKnown RBP19.2■□□□□ 0.66
TUBGCP4-201ENST00000260383 ABCC8Q09428 1581 aa19.17■□□□□ 0.66
TUBGCP4-201ENST00000260383 SOGA1O94964 1423 aa19.17■□□□□ 0.66
TUBGCP4-201ENST00000260383 MROH2BQ7Z745 1585 aa19.16■□□□□ 0.66
TUBGCP4-201ENST00000260383 EIF4G1Q04637 1599 aaKnown RBP19.14■□□□□ 0.65
TUBGCP4-201ENST00000260383 ITGAEP38570 1179 aa19.13■□□□□ 0.65
TUBGCP4-201ENST00000260383 WIZO95785 1651 aa19.11■□□□□ 0.65
TUBGCP4-201ENST00000260383 UNC13AQ9UPW8 1703 aa19.1■□□□□ 0.65
TUBGCP4-201ENST00000260383 RUSC2Q8N2Y8 1516 aa19.07■□□□□ 0.64
TUBGCP4-201ENST00000260383 DHX57Q6P158 1386 aaKnown RBP19.05■□□□□ 0.64
TUBGCP4-201ENST00000260383 NEFLP07196 543 aa18.97■□□□□ 0.63
TUBGCP4-201ENST00000260383 GOLGA3Q08378 1498 aa18.95■□□□□ 0.62
TUBGCP4-201ENST00000260383 FANCIQ9NVI1 1328 aa18.92■□□□□ 0.62
TUBGCP4-201ENST00000260383 ERICH6Q7L0X2 663 aa18.91■□□□□ 0.62
TUBGCP4-201ENST00000260383 BAZ1AQ9NRL2 1556 aaPredicted RBP18.9■□□□□ 0.62
TUBGCP4-201ENST00000260383 CLIP1P30622 1438 aa18.9■□□□□ 0.62
TUBGCP4-201ENST00000260383 EEA1Q15075 1411 aa18.89■□□□□ 0.61
TUBGCP4-201ENST00000260383 DEKP35659 375 aaKnown RBP18.89■□□□□ 0.61
TUBGCP4-201ENST00000260383 ANO8Q9HCE9 1232 aaPredicted RBP18.89■□□□□ 0.61
TUBGCP4-201ENST00000260383 BICRAQ9NZM4 1560 aa18.89■□□□□ 0.61
TUBGCP4-201ENST00000260383 APLP2Q06481 763 aa18.88■□□□□ 0.61
TUBGCP4-201ENST00000260383 TRIM52Q96A61 297 aa18.88■□□□□ 0.61
TUBGCP4-201ENST00000260383 VPS8Q8N3P4 1428 aa18.85■□□□□ 0.61
TUBGCP4-201ENST00000260383 DDX10Q13206 875 aaKnown RBP18.84■□□□□ 0.61
TUBGCP4-201ENST00000260383 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
TUBGCP4-201ENST00000260383 RANGAP1P46060 587 aaPredicted RBP18.8■□□□□ 0.6
TUBGCP4-201ENST00000260383 CDK11AQ9UQ88 783 aaPredicted RBP18.75■□□□□ 0.59
TUBGCP4-201ENST00000260383 MYT1LQ9UL68 1186 aa18.75■□□□□ 0.59
TUBGCP4-201ENST00000260383 IRX6P78412 446 aaPredicted RBP18.73■□□□□ 0.59
TUBGCP4-201ENST00000260383 CEP164Q9UPV0 1460 aa18.72■□□□□ 0.59
TUBGCP4-201ENST00000260383 PPP1R15AO75807 674 aaPredicted RBP18.7■□□□□ 0.58
TUBGCP4-201ENST00000260383 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
TUBGCP4-201ENST00000260383 SALL2Q9Y467 1007 aaPredicted RBP18.69■□□□□ 0.58
TUBGCP4-201ENST00000260383 KANK4Q5T7N3 995 aaPredicted RBP18.66■□□□□ 0.58
TUBGCP4-201ENST00000260383 KIF21BO75037 1637 aa18.66■□□□□ 0.58
TUBGCP4-201ENST00000260383 SMARCA2P51531 1590 aa18.66■□□□□ 0.58
TUBGCP4-201ENST00000260383 HIRIP3Q9BW71 556 aaPredicted RBP18.65■□□□□ 0.58
TUBGCP4-201ENST00000260383 TOP2AP11388 1531 aaKnown RBP18.65■□□□□ 0.58
TUBGCP4-201ENST00000260383 NBR1Q14596 966 aa18.65■□□□□ 0.58
TUBGCP4-201ENST00000260383 CCER2I3L3R5 266 aa18.64■□□□□ 0.57
TUBGCP4-201ENST00000260383 RAPGEF2Q9Y4G8 1499 aa18.6■□□□□ 0.57
TUBGCP4-201ENST00000260383 ANP32CO43423 234 aa18.59■□□□□ 0.57
TUBGCP4-201ENST00000260383 CCDC136Q96JN2 1154 aa18.59■□□□□ 0.57
TUBGCP4-201ENST00000260383 WDR97A6NE52 1622 aa18.59■□□□□ 0.57
TUBGCP4-201ENST00000260383 PAK3O75914 559 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms