RNA–Protein interactions for RNA: ENST00000394319.8

LHX6-204, Transcript of LIM homeobox 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX6, Length 3,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6-204ENST00000394319 NISCHQ9Y2I1 1504 aa26.4■■□□□ 1.82
LHX6-204ENST00000394319 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
LHX6-204ENST00000394319 ABCC9O60706 1549 aa22.85■■□□□ 1.25
LHX6-204ENST00000394319 SHROOM4Q9ULL8 1493 aa22.77■■□□□ 1.24
LHX6-204ENST00000394319 CCDC180Q9P1Z9 1646 aa22.5■■□□□ 1.19
LHX6-204ENST00000394319 ZCCHC6Q5VYS8 1495 aaKnown RBP21.98■■□□□ 1.11
LHX6-204ENST00000394319 PABPN1Q86U42 306 aaKnown RBP eCLIP21.95■■□□□ 1.1
LHX6-204ENST00000394319 SUPT5HO00267 1087 aaKnown RBP21.9■■□□□ 1.1
LHX6-204ENST00000394319 SCRIBQ14160 1630 aa21.63■■□□□ 1.05
LHX6-204ENST00000394319 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.01
LHX6-204ENST00000394319 NACADO15069 1562 aa21.34■■□□□ 1.01
LHX6-204ENST00000394319 PELP1Q8IZL8 1130 aaKnown RBP21.21■□□□□ 0.99
LHX6-204ENST00000394319 DCAF1Q9Y4B6 1507 aa21.21■□□□□ 0.99
LHX6-204ENST00000394319 CECR2Q9BXF3 1484 aa20.98■□□□□ 0.95
LHX6-204ENST00000394319 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
LHX6-204ENST00000394319 HRCP23327 699 aa20.73■□□□□ 0.91
LHX6-204ENST00000394319 UNC13AQ9UPW8 1703 aa20.71■□□□□ 0.91
LHX6-204ENST00000394319 EHMT2Q96KQ7 1210 aa20.69■□□□□ 0.9
LHX6-204ENST00000394319 BICRAQ9NZM4 1560 aa20.68■□□□□ 0.9
LHX6-204ENST00000394319 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
LHX6-204ENST00000394319 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.9
LHX6-204ENST00000394319 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
LHX6-204ENST00000394319 MYT1Q01538 1121 aa20.58■□□□□ 0.89
LHX6-204ENST00000394319 DNAJC5BQ9UF47 199 aa20.57■□□□□ 0.88
LHX6-204ENST00000394319 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
LHX6-204ENST00000394319 WIZO95785 1651 aa20.42■□□□□ 0.86
LHX6-204ENST00000394319 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
LHX6-204ENST00000394319 PCGF6Q9BYE7 350 aa20.3■□□□□ 0.84
LHX6-204ENST00000394319 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
LHX6-204ENST00000394319 SMARCA4P51532 1647 aa20.27■□□□□ 0.83
LHX6-204ENST00000394319 BAZ1BQ9UIG0 1483 aaKnown RBP20.23■□□□□ 0.83
LHX6-204ENST00000394319 TRIM41Q8WV44 630 aa20.23■□□□□ 0.83
LHX6-204ENST00000394319 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
LHX6-204ENST00000394319 ATAD2BQ9ULI0 1458 aa20.2■□□□□ 0.82
LHX6-204ENST00000394319 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
LHX6-204ENST00000394319 CC2D2AQ9P2K1 1620 aa20.12■□□□□ 0.81
LHX6-204ENST00000394319 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
LHX6-204ENST00000394319 RANGAP1P46060 587 aaPredicted RBP20.02■□□□□ 0.8
LHX6-204ENST00000394319 SMARCA2P51531 1590 aa19.96■□□□□ 0.79
LHX6-204ENST00000394319 LOC105371045A0A1W2PR82 267 aa19.94■□□□□ 0.78
LHX6-204ENST00000394319 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
LHX6-204ENST00000394319 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
LHX6-204ENST00000394319 NESP48681 1621 aa19.86■□□□□ 0.77
LHX6-204ENST00000394319 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
LHX6-204ENST00000394319 CADPSQ9ULU8 1353 aa19.68■□□□□ 0.74
LHX6-204ENST00000394319 TTBK1Q5TCY1 1321 aaPredicted RBP19.63■□□□□ 0.73
LHX6-204ENST00000394319 UBTFP17480 764 aaKnown RBP19.63■□□□□ 0.73
LHX6-204ENST00000394319 ERCC6Q03468 1493 aa19.61■□□□□ 0.73
LHX6-204ENST00000394319 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.73
LHX6-204ENST00000394319 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
LHX6-204ENST00000394319 FBLN2P98095 1184 aa19.57■□□□□ 0.72
LHX6-204ENST00000394319 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
LHX6-204ENST00000394319 GTF3C3Q9Y5Q9 886 aa19.52■□□□□ 0.71
LHX6-204ENST00000394319 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
LHX6-204ENST00000394319 BCL11AQ9H165 835 aa19.47■□□□□ 0.71
LHX6-204ENST00000394319 SOGA1O94964 1423 aa19.46■□□□□ 0.71
LHX6-204ENST00000394319 CFTRP13569 1480 aa19.44■□□□□ 0.7
LHX6-204ENST00000394319 NEUROD1Q13562 356 aa19.43■□□□□ 0.7
LHX6-204ENST00000394319 ACIN1Q9UKV3 1341 aaKnown RBP19.41■□□□□ 0.7
LHX6-204ENST00000394319 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
LHX6-204ENST00000394319 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
LHX6-204ENST00000394319 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.7
LHX6-204ENST00000394319 CSRNP3Q8WYN3 585 aa19.38■□□□□ 0.69
LHX6-204ENST00000394319 ATP1B4Q9UN42 357 aaPredicted RBP19.35■□□□□ 0.69
LHX6-204ENST00000394319 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
LHX6-204ENST00000394319 RAD54L2Q9Y4B4 1467 aa19.33■□□□□ 0.69
LHX6-204ENST00000394319 P3H3Q8IVL6 736 aa19.33■□□□□ 0.68
LHX6-204ENST00000394319 PRKCSHP14314 528 aaPredicted RBP19.32■□□□□ 0.68
LHX6-204ENST00000394319 SYNJ1O43426 1573 aa19.27■□□□□ 0.68
LHX6-204ENST00000394319 CENPBP07199 599 aaPredicted RBP19.27■□□□□ 0.68
LHX6-204ENST00000394319 CUX2O14529 1486 aa19.24■□□□□ 0.67
LHX6-204ENST00000394319 CUX1P39880 1505 aa19.22■□□□□ 0.67
LHX6-204ENST00000394319 ARID3CA6NKF2 412 aa19.21■□□□□ 0.67
LHX6-204ENST00000394319 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
LHX6-204ENST00000394319 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.66
LHX6-204ENST00000394319 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
LHX6-204ENST00000394319 TOPBP1Q92547 1522 aa19.12■□□□□ 0.65
LHX6-204ENST00000394319 LAMC3Q9Y6N6 1575 aa19.12■□□□□ 0.65
LHX6-204ENST00000394319 CHMP7Q8WUX9 453 aaPredicted RBP19.11■□□□□ 0.65
LHX6-204ENST00000394319 ZEB1P37275 1124 aaPredicted RBP19.1■□□□□ 0.65
LHX6-204ENST00000394319 KIF21AQ7Z4S6 1674 aa19.09■□□□□ 0.65
LHX6-204ENST00000394319 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
LHX6-204ENST00000394319 KIF27Q86VH2 1401 aa19.06■□□□□ 0.64
LHX6-204ENST00000394319 MRC2Q9UBG0 1479 aa19.04■□□□□ 0.64
LHX6-204ENST00000394319 TRIM26Q12899 539 aaPredicted RBP19.04■□□□□ 0.64
LHX6-204ENST00000394319 ZNF608Q9ULD9 1512 aaPredicted RBP19.02■□□□□ 0.63
LHX6-204ENST00000394319 CARMIL1Q5VZK9 1371 aa18.97■□□□□ 0.63
LHX6-204ENST00000394319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.96■□□□□ 0.63
LHX6-204ENST00000394319 HNRNPUL2Q1KMD3 747 aaKnown RBP18.96■□□□□ 0.63
LHX6-204ENST00000394319 YTHDC1Q96MU7 727 aaKnown RBP18.96■□□□□ 0.63
LHX6-204ENST00000394319 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
LHX6-204ENST00000394319 IGF1RP08069 1367 aa18.95■□□□□ 0.62
LHX6-204ENST00000394319 RAPGEF2Q9Y4G8 1499 aa18.94■□□□□ 0.62
LHX6-204ENST00000394319 APLP2Q06481 763 aa18.92■□□□□ 0.62
LHX6-204ENST00000394319 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
LHX6-204ENST00000394319 GAPVD1Q14C86 1478 aa18.88■□□□□ 0.61
LHX6-204ENST00000394319 ANP32EQ9BTT0 268 aa18.79■□□□□ 0.6
LHX6-204ENST00000394319 GOLGA3Q08378 1498 aa18.78■□□□□ 0.6
LHX6-204ENST00000394319 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
LHX6-204ENST00000394319 ITGAEP38570 1179 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms