RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 NISCHQ9Y2I1 1504 aa41■■■■■ 4.15
CD40-202ENST00000372285 CCDC180Q9P1Z9 1646 aa35.82■■■■□ 3.33
CD40-202ENST00000372285 ZCCHC6Q5VYS8 1495 aaKnown RBP34.44■■■■□ 3.1
CD40-202ENST00000372285 DCAF1Q9Y4B6 1507 aa33.95■■■■□ 3.03
CD40-202ENST00000372285 ABCC9O60706 1549 aa33.73■■■□□ 2.99
CD40-202ENST00000372285 DCAF8L2P0C7V8 631 aa33.7■■■□□ 2.99
CD40-202ENST00000372285 MYO15BQ96JP2 1530 aa33.55■■■□□ 2.96
CD40-202ENST00000372285 SHROOM4Q9ULL8 1493 aa33.32■■■□□ 2.92
CD40-202ENST00000372285 NACADO15069 1562 aa33.32■■■□□ 2.92
CD40-202ENST00000372285 RB1CC1Q8TDY2 1594 aa33.02■■■□□ 2.88
CD40-202ENST00000372285 SCRIBQ14160 1630 aa32.84■■■□□ 2.85
CD40-202ENST00000372285 UNC13AQ9UPW8 1703 aa32.42■■■□□ 2.78
CD40-202ENST00000372285 SUPT5HO00267 1087 aaKnown RBP32.06■■■□□ 2.72
CD40-202ENST00000372285 BICRAQ9NZM4 1560 aa32.04■■■□□ 2.72
CD40-202ENST00000372285 CECR2Q9BXF3 1484 aa31.82■■■□□ 2.68
CD40-202ENST00000372285 RSF1Q96T23 1441 aaPredicted RBP31.78■■■□□ 2.68
CD40-202ENST00000372285 PABPN1Q86U42 306 aaKnown RBP eCLIP31.77■■■□□ 2.68
CD40-202ENST00000372285 MROH2BQ7Z745 1585 aa31.66■■■□□ 2.66
CD40-202ENST00000372285 BAZ1AQ9NRL2 1556 aaPredicted RBP31.66■■■□□ 2.66
CD40-202ENST00000372285 SMARCA4P51532 1647 aa31.53■■■□□ 2.64
CD40-202ENST00000372285 WIZO95785 1651 aa31.42■■■□□ 2.62
CD40-202ENST00000372285 PEG3Q9GZU2 1588 aa31.17■■■□□ 2.58
CD40-202ENST00000372285 TOP2AP11388 1531 aaKnown RBP31.1■■■□□ 2.57
CD40-202ENST00000372285 EIF4G1Q04637 1599 aaKnown RBP31.04■■■□□ 2.56
CD40-202ENST00000372285 SMARCA2P51531 1590 aa30.99■■■□□ 2.55
CD40-202ENST00000372285 ATAD2BQ9ULI0 1458 aa30.97■■■□□ 2.55
CD40-202ENST00000372285 BAZ1BQ9UIG0 1483 aaKnown RBP30.79■■■□□ 2.52
CD40-202ENST00000372285 CHIC1Q5VXU3 224 aa30.76■■■□□ 2.52
CD40-202ENST00000372285 CCDC88BA6NC98 1476 aa30.75■■■□□ 2.51
CD40-202ENST00000372285 NCAPD3P42695 1498 aa30.73■■■□□ 2.51
CD40-202ENST00000372285 HMGXB3Q12766 1538 aa30.71■■■□□ 2.51
CD40-202ENST00000372285 CC2D2AQ9P2K1 1620 aa30.58■■■□□ 2.49
CD40-202ENST00000372285 TRIM41Q8WV44 630 aa30.18■■■□□ 2.42
CD40-202ENST00000372285 ABCC8Q09428 1581 aa30.09■■■□□ 2.41
CD40-202ENST00000372285 CFTRP13569 1480 aa30.04■■■□□ 2.4
CD40-202ENST00000372285 PRDM2Q13029 1718 aa30■■■□□ 2.39
CD40-202ENST00000372285 CADPSQ9ULU8 1353 aa29.92■■■□□ 2.38
CD40-202ENST00000372285 WRNQ14191 1432 aaPredicted RBP eCLIP29.91■■■□□ 2.38
CD40-202ENST00000372285 SYNJ1O43426 1573 aa29.81■■■□□ 2.36
CD40-202ENST00000372285 DNAJC5BQ9UF47 199 aa29.72■■■□□ 2.35
CD40-202ENST00000372285 TOP2BQ02880 1626 aa29.72■■■□□ 2.35
CD40-202ENST00000372285 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
CD40-202ENST00000372285 LAMC3Q9Y6N6 1575 aa29.7■■■□□ 2.35
CD40-202ENST00000372285 NESP48681 1621 aa29.63■■■□□ 2.33
CD40-202ENST00000372285 CUX1P39880 1505 aa29.61■■■□□ 2.33
CD40-202ENST00000372285 FANCD2Q9BXW9 1451 aa29.58■■■□□ 2.33
CD40-202ENST00000372285 FAM9AQ8IZU1 332 aaPredicted RBP29.57■■■□□ 2.32
CD40-202ENST00000372285 LOC105371045A0A1W2PR82 267 aa29.54■■■□□ 2.32
CD40-202ENST00000372285 SOGA1O94964 1423 aa29.52■■■□□ 2.32
CD40-202ENST00000372285 EEA1Q15075 1411 aa29.52■■■□□ 2.32
CD40-202ENST00000372285 PDS5BQ9NTI5 1447 aa29.43■■■□□ 2.3
CD40-202ENST00000372285 RUSC2Q8N2Y8 1516 aa29.42■■■□□ 2.3
CD40-202ENST00000372285 CEP164Q9UPV0 1460 aa29.4■■■□□ 2.3
CD40-202ENST00000372285 DNMBPQ6XZF7 1577 aa29.36■■■□□ 2.29
CD40-202ENST00000372285 KIF21AQ7Z4S6 1674 aa29.35■■■□□ 2.29
CD40-202ENST00000372285 CSRNP3Q8WYN3 585 aa29.3■■■□□ 2.28
CD40-202ENST00000372285 TOPBP1Q92547 1522 aa29.29■■■□□ 2.28
CD40-202ENST00000372285 FGD5Q6ZNL6 1462 aa29.26■■■□□ 2.27
CD40-202ENST00000372285 URB2Q14146 1524 aaKnown RBP29.23■■■□□ 2.27
CD40-202ENST00000372285 KIF21BO75037 1637 aa29.16■■■□□ 2.26
CD40-202ENST00000372285 KIF27Q86VH2 1401 aa29.15■■■□□ 2.26
CD40-202ENST00000372285 POLA1P09884 1462 aaPredicted RBP29.13■■■□□ 2.25
CD40-202ENST00000372285 EHMT2Q96KQ7 1210 aa29.11■■■□□ 2.25
CD40-202ENST00000372285 GOLGA3Q08378 1498 aa29.08■■■□□ 2.25
CD40-202ENST00000372285 CUX2O14529 1486 aa29.06■■■□□ 2.24
CD40-202ENST00000372285 MRC2Q9UBG0 1479 aa29.06■■■□□ 2.24
CD40-202ENST00000372285 ABCA10Q8WWZ4 1543 aa29.03■■■□□ 2.24
CD40-202ENST00000372285 RAD54L2Q9Y4B4 1467 aa29.01■■■□□ 2.23
CD40-202ENST00000372285 TNIKQ9UKE5 1360 aa29■■■□□ 2.23
CD40-202ENST00000372285 WDR97A6NE52 1622 aa28.99■■■□□ 2.23
CD40-202ENST00000372285 PRXQ9BXM0 1461 aa28.98■■■□□ 2.23
CD40-202ENST00000372285 ERICH3Q5RHP9 1530 aa28.96■■■□□ 2.23
CD40-202ENST00000372285 WDR62O43379 1518 aa28.93■■■□□ 2.22
CD40-202ENST00000372285 RAPGEF2Q9Y4G8 1499 aa28.92■■■□□ 2.22
CD40-202ENST00000372285 ERCC6Q03468 1493 aa28.92■■■□□ 2.22
CD40-202ENST00000372285 IGF1RP08069 1367 aa28.89■■■□□ 2.22
CD40-202ENST00000372285 UBTFP17480 764 aaKnown RBP28.89■■■□□ 2.21
CD40-202ENST00000372285 TARBP1Q13395 1621 aaKnown RBP28.88■■■□□ 2.21
CD40-202ENST00000372285 THOC2Q8NI27 1593 aaKnown RBP28.85■■■□□ 2.21
CD40-202ENST00000372285 ABCA5Q8WWZ7 1642 aa28.82■■■□□ 2.2
CD40-202ENST00000372285 CEP162Q5TB80 1403 aa28.82■■■□□ 2.2
CD40-202ENST00000372285 CUL7Q14999 1698 aa28.73■■■□□ 2.19
CD40-202ENST00000372285 CARMIL1Q5VZK9 1371 aa28.73■■■□□ 2.19
CD40-202ENST00000372285 GAPVD1Q14C86 1478 aa28.71■■■□□ 2.19
CD40-202ENST00000372285 TDRD9Q8NDG6 1382 aaKnown RBP28.71■■■□□ 2.19
CD40-202ENST00000372285 IFT140Q96RY7 1462 aa28.71■■■□□ 2.19
CD40-202ENST00000372285 PBRM1Q86U86 1689 aa28.61■■■□□ 2.17
CD40-202ENST00000372285 CLIP1P30622 1438 aa28.6■■■□□ 2.17
CD40-202ENST00000372285 AQRO60306 1485 aaKnown RBP eCLIP28.54■■■□□ 2.16
CD40-202ENST00000372285 ZNF608Q9ULD9 1512 aaPredicted RBP28.52■■■□□ 2.16
CD40-202ENST00000372285 GRIN2BQ13224 1484 aa28.5■■■□□ 2.15
CD40-202ENST00000372285 EIF4G3O43432 1585 aaKnown RBP28.47■■■□□ 2.15
CD40-202ENST00000372285 ADAMTS12P58397 1594 aa28.43■■■□□ 2.14
CD40-202ENST00000372285 CTTNBP2Q8WZ74 1663 aa28.43■■■□□ 2.14
CD40-202ENST00000372285 FHAD1B1AJZ9 1412 aa28.41■■■□□ 2.14
CD40-202ENST00000372285 VPS8Q8N3P4 1428 aa28.36■■■□□ 2.13
CD40-202ENST00000372285 RANGAP1P46060 587 aaPredicted RBP28.35■■■□□ 2.13
CD40-202ENST00000372285 ARAP1Q96P48 1450 aa28.34■■■□□ 2.13
CD40-202ENST00000372285 ARHGAP35Q9NRY4 1499 aa28.33■■■□□ 2.13
CD40-202ENST00000372285 SNAPC4Q5SXM2 1469 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms