Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHA11Q9Y5I1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHA11Q9Y5I1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDHA11Q9Y5I1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA11Q9Y5I1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA11Q9Y5I1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHA11Q9Y5I1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PCDHA11Q9Y5I1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
PCDHA11Q9Y5I1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHA11Q9Y5I1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.7■■□□□ 1.7
PCDHA11Q9Y5I1 SUDS3P1-201ENST00000505831 966 ntBASIC25.7■■□□□ 1.7
PCDHA11Q9Y5I1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
PCDHA11Q9Y5I1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA11Q9Y5I1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA11Q9Y5I1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHA11Q9Y5I1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.69■■□□□ 1.7
PCDHA11Q9Y5I1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.69■■□□□ 1.7
PCDHA11Q9Y5I1 AL031432.3-201ENST00000607698 485 ntBASIC25.69■■□□□ 1.7
PCDHA11Q9Y5I1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.69■■□□□ 1.7
PCDHA11Q9Y5I1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA11Q9Y5I1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA11Q9Y5I1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.68■■□□□ 1.7
PCDHA11Q9Y5I1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDHA11Q9Y5I1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHA11Q9Y5I1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.68■■□□□ 1.7
PCDHA11Q9Y5I1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
PCDHA11Q9Y5I1 UNC93B3-201ENST00000308076 687 ntBASIC25.67■■□□□ 1.7
PCDHA11Q9Y5I1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
PCDHA11Q9Y5I1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHA11Q9Y5I1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA11Q9Y5I1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA11Q9Y5I1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDHA11Q9Y5I1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA11Q9Y5I1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHA11Q9Y5I1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHA11Q9Y5I1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHA11Q9Y5I1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.66■■□□□ 1.7
PCDHA11Q9Y5I1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHA11Q9Y5I1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHA11Q9Y5I1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.65■■□□□ 1.7
PCDHA11Q9Y5I1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHA11Q9Y5I1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHA11Q9Y5I1 AL136162.1-201ENST00000607711 1078 ntBASIC25.64■■□□□ 1.7
PCDHA11Q9Y5I1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHA11Q9Y5I1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.69
PCDHA11Q9Y5I1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA11Q9Y5I1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.63■■□□□ 1.69
PCDHA11Q9Y5I1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.63■■□□□ 1.69
PCDHA11Q9Y5I1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
PCDHA11Q9Y5I1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA11Q9Y5I1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA11Q9Y5I1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHA11Q9Y5I1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.62■■□□□ 1.69
PCDHA11Q9Y5I1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PCDHA11Q9Y5I1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHA11Q9Y5I1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHA11Q9Y5I1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA11Q9Y5I1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.61■■□□□ 1.69
PCDHA11Q9Y5I1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA11Q9Y5I1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
PCDHA11Q9Y5I1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA11Q9Y5I1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.61■■□□□ 1.69
PCDHA11Q9Y5I1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHA11Q9Y5I1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA11Q9Y5I1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA11Q9Y5I1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA11Q9Y5I1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA11Q9Y5I1 EDA-201ENST00000338901 1233 ntBASIC25.6■■□□□ 1.69
PCDHA11Q9Y5I1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
PCDHA11Q9Y5I1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA11Q9Y5I1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PCDHA11Q9Y5I1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHA11Q9Y5I1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PCDHA11Q9Y5I1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA11Q9Y5I1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA11Q9Y5I1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA11Q9Y5I1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDHA11Q9Y5I1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDHA11Q9Y5I1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA11Q9Y5I1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDHA11Q9Y5I1 AL355001.2-201ENST00000620617 1191 ntBASIC25.59■■□□□ 1.69
PCDHA11Q9Y5I1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA11Q9Y5I1 AF131216.4-201ENST00000638924 1588 ntBASIC25.59■■□□□ 1.69
PCDHA11Q9Y5I1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHA11Q9Y5I1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.58■■□□□ 1.69
PCDHA11Q9Y5I1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA11Q9Y5I1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA11Q9Y5I1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA11Q9Y5I1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.58■■□□□ 1.69
PCDHA11Q9Y5I1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.58■■□□□ 1.69
PCDHA11Q9Y5I1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHA11Q9Y5I1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA11Q9Y5I1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA11Q9Y5I1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.57■■□□□ 1.68
PCDHA11Q9Y5I1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA11Q9Y5I1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHA11Q9Y5I1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA11Q9Y5I1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHA11Q9Y5I1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.56■■□□□ 1.68
PCDHA11Q9Y5I1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms