RNA–Protein interactions for RNA: ENST00000403610.8

ALKAL2-204, Transcript of ALK and LTK ligand 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALKAL2, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL2-204ENST00000403610 NISCHQ9Y2I1 1504 aa54.64■■■■■ 6.34
ALKAL2-204ENST00000403610 ABCC9O60706 1549 aa49.69■■■■■ 5.54
ALKAL2-204ENST00000403610 CCDC180Q9P1Z9 1646 aa49.24■■■■■ 5.47
ALKAL2-204ENST00000403610 RB1CC1Q8TDY2 1594 aa47.16■■■■■ 5.14
ALKAL2-204ENST00000403610 DNAJC5BQ9UF47 199 aa47.12■■■■■ 5.13
ALKAL2-204ENST00000403610 NACADO15069 1562 aa46.75■■■■■ 5.07
ALKAL2-204ENST00000403610 DCAF8L2P0C7V8 631 aa46.25■■■■■ 4.99
ALKAL2-204ENST00000403610 PABPN1Q86U42 306 aaKnown RBP eCLIP46.18■■■■■ 4.98
ALKAL2-204ENST00000403610 MYO15BQ96JP2 1530 aa46.04■■■■■ 4.96
ALKAL2-204ENST00000403610 UNC13AQ9UPW8 1703 aa45.89■■■■■ 4.94
ALKAL2-204ENST00000403610 BICRAQ9NZM4 1560 aa45.74■■■■■ 4.91
ALKAL2-204ENST00000403610 SHROOM4Q9ULL8 1493 aa45.3■■■■■ 4.84
ALKAL2-204ENST00000403610 DCAF1Q9Y4B6 1507 aa45.21■■■■■ 4.83
ALKAL2-204ENST00000403610 ZCCHC6Q5VYS8 1495 aaKnown RBP45.16■■■■■ 4.82
ALKAL2-204ENST00000403610 CECR2Q9BXF3 1484 aa44.89■■■■■ 4.78
ALKAL2-204ENST00000403610 CC2D2AQ9P2K1 1620 aa44.88■■■■■ 4.77
ALKAL2-204ENST00000403610 SCRIBQ14160 1630 aa44.69■■■■■ 4.75
ALKAL2-204ENST00000403610 EIF4G1Q04637 1599 aaKnown RBP44.69■■■■■ 4.74
ALKAL2-204ENST00000403610 DNAJC5Q9H3Z4 198 aa43.8■■■■■ 4.6
ALKAL2-204ENST00000403610 NCAPD3P42695 1498 aa43.21■■■■■ 4.51
ALKAL2-204ENST00000403610 CUX2O14529 1486 aa43.2■■■■■ 4.51
ALKAL2-204ENST00000403610 ERCC6Q03468 1493 aa42.99■■■■■ 4.47
ALKAL2-204ENST00000403610 ATAD2BQ9ULI0 1458 aa42.92■■■■■ 4.46
ALKAL2-204ENST00000403610 SMARCA2P51531 1590 aa42.8■■■■■ 4.44
ALKAL2-204ENST00000403610 HMGXB3Q12766 1538 aa42.79■■■■■ 4.44
ALKAL2-204ENST00000403610 SMARCA4P51532 1647 aa42.67■■■■■ 4.42
ALKAL2-204ENST00000403610 NESP48681 1621 aa42.5■■■■■ 4.39
ALKAL2-204ENST00000403610 BAZ1AQ9NRL2 1556 aaPredicted RBP42.46■■■■■ 4.39
ALKAL2-204ENST00000403610 BAZ1BQ9UIG0 1483 aaKnown RBP42.45■■■■■ 4.39
ALKAL2-204ENST00000403610 PEG3Q9GZU2 1588 aa42.37■■■■■ 4.37
ALKAL2-204ENST00000403610 LAMC3Q9Y6N6 1575 aa42.25■■■■■ 4.35
ALKAL2-204ENST00000403610 THOC2Q8NI27 1593 aaKnown RBP42.21■■■■■ 4.35
ALKAL2-204ENST00000403610 PDS5BQ9NTI5 1447 aa42.09■■■■■ 4.33
ALKAL2-204ENST00000403610 MROH2BQ7Z745 1585 aa42.02■■■■■ 4.32
ALKAL2-204ENST00000403610 KIF21AQ7Z4S6 1674 aa41.88■■■■■ 4.3
ALKAL2-204ENST00000403610 CADPSQ9ULU8 1353 aa41.85■■■■■ 4.29
ALKAL2-204ENST00000403610 MRC2Q9UBG0 1479 aa41.68■■■■■ 4.26
ALKAL2-204ENST00000403610 WDR62O43379 1518 aa41.59■■■■■ 4.25
ALKAL2-204ENST00000403610 TRIM41Q8WV44 630 aa41.48■■■■■ 4.23
ALKAL2-204ENST00000403610 WIZO95785 1651 aa41.42■■■■■ 4.22
ALKAL2-204ENST00000403610 CEP164Q9UPV0 1460 aa41.4■■■■■ 4.22
ALKAL2-204ENST00000403610 FANCD2Q9BXW9 1451 aa41.3■■■■■ 4.2
ALKAL2-204ENST00000403610 CFTRP13569 1480 aa41.25■■■■■ 4.19
ALKAL2-204ENST00000403610 OSCARQ8IYS5 282 aa41.16■■■■■ 4.18
ALKAL2-204ENST00000403610 RSF1Q96T23 1441 aaPredicted RBP41.03■■■■■ 4.16
ALKAL2-204ENST00000403610 TOP2AP11388 1531 aaKnown RBP40.97■■■■■ 4.15
ALKAL2-204ENST00000403610 URB2Q14146 1524 aaKnown RBP40.96■■■■■ 4.15
ALKAL2-204ENST00000403610 IFT140Q96RY7 1462 aa40.65■■■■■ 4.1
ALKAL2-204ENST00000403610 PRDM2Q13029 1718 aa40.61■■■■■ 4.09
ALKAL2-204ENST00000403610 ZNF608Q9ULD9 1512 aaPredicted RBP40.52■■■■■ 4.08
ALKAL2-204ENST00000403610 CCDC88BA6NC98 1476 aa40.51■■■■■ 4.08
ALKAL2-204ENST00000403610 RIMBP3CA6NJZ7 1639 aa40.5■■■■■ 4.07
ALKAL2-204ENST00000403610 RIMBP3BA6NNM3 1639 aa40.5■■■■■ 4.07
ALKAL2-204ENST00000403610 RIMBP3Q9UFD9 1639 aa40.5■■■■■ 4.07
ALKAL2-204ENST00000403610 ABCC8Q09428 1581 aa40.46■■■■■ 4.07
ALKAL2-204ENST00000403610 TOPBP1Q92547 1522 aa40.45■■■■■ 4.07
ALKAL2-204ENST00000403610 ARHGEF11O15085 1522 aa40.39■■■■■ 4.06
ALKAL2-204ENST00000403610 DNMBPQ6XZF7 1577 aa40.25■■■■■ 4.03
ALKAL2-204ENST00000403610 EIF4G3O43432 1585 aaKnown RBP40.24■■■■■ 4.03
ALKAL2-204ENST00000403610 CYB5RLQ6IPT4 315 aa40.13■■■■■ 4.02
ALKAL2-204ENST00000403610 TARBP1Q13395 1621 aaKnown RBP40.11■■■■■ 4.01
ALKAL2-204ENST00000403610 AQRO60306 1485 aaKnown RBP eCLIP40.11■■■■■ 4.01
ALKAL2-204ENST00000403610 POLA1P09884 1462 aaPredicted RBP40■■■■□ 3.99
ALKAL2-204ENST00000403610 CHD1O14646 1710 aa39.98■■■■□ 3.99
ALKAL2-204ENST00000403610 FBLN2P98095 1184 aa39.95■■■■□ 3.99
ALKAL2-204ENST00000403610 ARAP1Q96P48 1450 aa39.93■■■■□ 3.98
ALKAL2-204ENST00000403610 SOGA1O94964 1423 aa39.85■■■■□ 3.97
ALKAL2-204ENST00000403610 TRHP20396 242 aaPredicted RBP39.84■■■■□ 3.97
ALKAL2-204ENST00000403610 RAD54L2Q9Y4B4 1467 aa39.8■■■■□ 3.96
ALKAL2-204ENST00000403610 TDRD9Q8NDG6 1382 aaKnown RBP39.79■■■■□ 3.96
ALKAL2-204ENST00000403610 WDR97A6NE52 1622 aa39.79■■■■□ 3.96
ALKAL2-204ENST00000403610 SNAPC4Q5SXM2 1469 aa39.68■■■■□ 3.94
ALKAL2-204ENST00000403610 MAGI1Q96QZ7 1491 aaPredicted RBP39.65■■■■□ 3.94
ALKAL2-204ENST00000403610 CHMP7Q8WUX9 453 aaPredicted RBP39.65■■■■□ 3.94
ALKAL2-204ENST00000403610 CLASP1Q7Z460 1538 aa39.65■■■■□ 3.94
ALKAL2-204ENST00000403610 FGD5Q6ZNL6 1462 aa39.64■■■■□ 3.94
ALKAL2-204ENST00000403610 SYNJ1O43426 1573 aa39.59■■■■□ 3.93
ALKAL2-204ENST00000403610 GRIN2BQ13224 1484 aa39.58■■■■□ 3.93
ALKAL2-204ENST00000403610 CUX1P39880 1505 aa39.52■■■■□ 3.92
ALKAL2-204ENST00000403610 SYNJ2O15056 1496 aa39.51■■■■□ 3.92
ALKAL2-204ENST00000403610 SUPT5HO00267 1087 aaKnown RBP39.42■■■■□ 3.9
ALKAL2-204ENST00000403610 GAPVD1Q14C86 1478 aa39.34■■■■□ 3.89
ALKAL2-204ENST00000403610 ABCA10Q8WWZ4 1543 aa39.24■■■■□ 3.87
ALKAL2-204ENST00000403610 PBRM1Q86U86 1689 aa39.21■■■■□ 3.87
ALKAL2-204ENST00000403610 ABCA5Q8WWZ7 1642 aa39.15■■■■□ 3.86
ALKAL2-204ENST00000403610 AEBP2Q6ZN18 517 aaPredicted RBP39.11■■■■□ 3.85
ALKAL2-204ENST00000403610 GRIN2AQ12879 1464 aa39.04■■■■□ 3.84
ALKAL2-204ENST00000403610 WRNQ14191 1432 aaPredicted RBP eCLIP39■■■■□ 3.83
ALKAL2-204ENST00000403610 NUP160Q12769 1436 aa38.97■■■■□ 3.83
ALKAL2-204ENST00000403610 ADAMTS12P58397 1594 aa38.88■■■■□ 3.82
ALKAL2-204ENST00000403610 ERCC6L2Q5T890 1561 aa38.88■■■■□ 3.81
ALKAL2-204ENST00000403610 CEP170Q5SW79 1584 aa38.87■■■■□ 3.81
ALKAL2-204ENST00000403610 FHAD1B1AJZ9 1412 aa38.86■■■■□ 3.81
ALKAL2-204ENST00000403610 SHROOM2Q13796 1616 aa38.79■■■■□ 3.8
ALKAL2-204ENST00000403610 TOP2BQ02880 1626 aa38.77■■■■□ 3.8
ALKAL2-204ENST00000403610 ERICH3Q5RHP9 1530 aa38.75■■■■□ 3.79
ALKAL2-204ENST00000403610 BIVM-ERCC5R4GMW8 1640 aa38.74■■■■□ 3.79
ALKAL2-204ENST00000403610 PRG4Q92954 1404 aaPredicted RBP38.6■■■■□ 3.77
ALKAL2-204ENST00000403610 JPH4Q96JJ6 628 aa38.58■■■■□ 3.77
ALKAL2-204ENST00000403610 KIF13AQ9H1H9 1805 aa38.46■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms