RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 NISCHQ9Y2I1 1504 aa55.82■■■■■ 6.53
PABPN1-207ENST00000556821 ABCC9O60706 1549 aa50.15■■■■■ 5.62
PABPN1-207ENST00000556821 CCDC180Q9P1Z9 1646 aa49.92■■■■■ 5.58
PABPN1-207ENST00000556821 DNAJC5BQ9UF47 199 aa48.22■■■■■ 5.31
PABPN1-207ENST00000556821 RB1CC1Q8TDY2 1594 aa47.23■■■■■ 5.15
PABPN1-207ENST00000556821 NACADO15069 1562 aa46.85■■■■■ 5.09
PABPN1-207ENST00000556821 PABPN1Q86U42 306 aaKnown RBP eCLIP46.66■■■■■ 5.06
PABPN1-207ENST00000556821 DCAF8L2P0C7V8 631 aa46.48■■■■■ 5.03
PABPN1-207ENST00000556821 ZCCHC6Q5VYS8 1495 aaKnown RBP46.48■■■■■ 5.03
PABPN1-207ENST00000556821 MYO15BQ96JP2 1530 aa46.47■■■■■ 5.03
PABPN1-207ENST00000556821 UNC13AQ9UPW8 1703 aa46.23■■■■■ 4.99
PABPN1-207ENST00000556821 DCAF1Q9Y4B6 1507 aa46.19■■■■■ 4.99
PABPN1-207ENST00000556821 BICRAQ9NZM4 1560 aa46.01■■■■■ 4.96
PABPN1-207ENST00000556821 SCRIBQ14160 1630 aa45.44■■■■■ 4.86
PABPN1-207ENST00000556821 CECR2Q9BXF3 1484 aa45.32■■■■■ 4.85
PABPN1-207ENST00000556821 SHROOM4Q9ULL8 1493 aa45.29■■■■■ 4.84
PABPN1-207ENST00000556821 CC2D2AQ9P2K1 1620 aa45.19■■■■■ 4.83
PABPN1-207ENST00000556821 DNAJC5Q9H3Z4 198 aa44.96■■■■■ 4.79
PABPN1-207ENST00000556821 EIF4G1Q04637 1599 aaKnown RBP44.9■■■■■ 4.78
PABPN1-207ENST00000556821 CUX2O14529 1486 aa43.66■■■■■ 4.58
PABPN1-207ENST00000556821 SMARCA4P51532 1647 aa43.46■■■■■ 4.55
PABPN1-207ENST00000556821 NCAPD3P42695 1498 aa43.33■■■■■ 4.53
PABPN1-207ENST00000556821 BAZ1AQ9NRL2 1556 aaPredicted RBP43.29■■■■■ 4.52
PABPN1-207ENST00000556821 ERCC6Q03468 1493 aa43.29■■■■■ 4.52
PABPN1-207ENST00000556821 ATAD2BQ9ULI0 1458 aa43.17■■■■■ 4.5
PABPN1-207ENST00000556821 SMARCA2P51531 1590 aa43.13■■■■■ 4.5
PABPN1-207ENST00000556821 MROH2BQ7Z745 1585 aa43.04■■■■■ 4.48
PABPN1-207ENST00000556821 PEG3Q9GZU2 1588 aa43.03■■■■■ 4.48
PABPN1-207ENST00000556821 HMGXB3Q12766 1538 aa43.02■■■■■ 4.48
PABPN1-207ENST00000556821 NESP48681 1621 aa42.83■■■■■ 4.45
PABPN1-207ENST00000556821 BAZ1BQ9UIG0 1483 aaKnown RBP42.8■■■■■ 4.44
PABPN1-207ENST00000556821 WIZO95785 1651 aa42.66■■■■■ 4.42
PABPN1-207ENST00000556821 THOC2Q8NI27 1593 aaKnown RBP42.48■■■■■ 4.39
PABPN1-207ENST00000556821 RSF1Q96T23 1441 aaPredicted RBP42.37■■■■■ 4.37
PABPN1-207ENST00000556821 TRIM41Q8WV44 630 aa42.35■■■■■ 4.37
PABPN1-207ENST00000556821 LAMC3Q9Y6N6 1575 aa42.29■■■■■ 4.36
PABPN1-207ENST00000556821 PDS5BQ9NTI5 1447 aa42.2■■■■■ 4.35
PABPN1-207ENST00000556821 TOP2AP11388 1531 aaKnown RBP42.11■■■■■ 4.33
PABPN1-207ENST00000556821 KIF21AQ7Z4S6 1674 aa41.99■■■■■ 4.31
PABPN1-207ENST00000556821 CADPSQ9ULU8 1353 aa41.95■■■■■ 4.31
PABPN1-207ENST00000556821 MRC2Q9UBG0 1479 aa41.84■■■■■ 4.29
PABPN1-207ENST00000556821 WDR62O43379 1518 aa41.76■■■■■ 4.28
PABPN1-207ENST00000556821 PRDM2Q13029 1718 aa41.61■■■■■ 4.25
PABPN1-207ENST00000556821 OSCARQ8IYS5 282 aa41.61■■■■■ 4.25
PABPN1-207ENST00000556821 CFTRP13569 1480 aa41.6■■■■■ 4.25
PABPN1-207ENST00000556821 CCDC88BA6NC98 1476 aa41.54■■■■■ 4.24
PABPN1-207ENST00000556821 CEP164Q9UPV0 1460 aa41.43■■■■■ 4.22
PABPN1-207ENST00000556821 FANCD2Q9BXW9 1451 aa41.42■■■■■ 4.22
PABPN1-207ENST00000556821 URB2Q14146 1524 aaKnown RBP41.11■■■■■ 4.17
PABPN1-207ENST00000556821 SUPT5HO00267 1087 aaKnown RBP40.96■■■■■ 4.15
PABPN1-207ENST00000556821 RIMBP3CA6NJZ7 1639 aa40.95■■■■■ 4.15
PABPN1-207ENST00000556821 RIMBP3BA6NNM3 1639 aa40.95■■■■■ 4.15
PABPN1-207ENST00000556821 RIMBP3Q9UFD9 1639 aa40.95■■■■■ 4.15
PABPN1-207ENST00000556821 ARHGEF11O15085 1522 aa40.81■■■■■ 4.12
PABPN1-207ENST00000556821 TOPBP1Q92547 1522 aa40.78■■■■■ 4.12
PABPN1-207ENST00000556821 ZNF608Q9ULD9 1512 aaPredicted RBP40.77■■■■■ 4.12
PABPN1-207ENST00000556821 DNMBPQ6XZF7 1577 aa40.74■■■■■ 4.11
PABPN1-207ENST00000556821 IFT140Q96RY7 1462 aa40.72■■■■■ 4.11
PABPN1-207ENST00000556821 ABCC8Q09428 1581 aa40.68■■■■■ 4.1
PABPN1-207ENST00000556821 CYB5RLQ6IPT4 315 aa40.67■■■■■ 4.1
PABPN1-207ENST00000556821 TARBP1Q13395 1621 aaKnown RBP40.45■■■■■ 4.07
PABPN1-207ENST00000556821 TRHP20396 242 aaPredicted RBP40.43■■■■■ 4.06
PABPN1-207ENST00000556821 CUX1P39880 1505 aa40.41■■■■■ 4.06
PABPN1-207ENST00000556821 POLA1P09884 1462 aaPredicted RBP40.4■■■■■ 4.06
PABPN1-207ENST00000556821 ARAP1Q96P48 1450 aa40.39■■■■■ 4.06
PABPN1-207ENST00000556821 EIF4G3O43432 1585 aaKnown RBP40.36■■■■■ 4.05
PABPN1-207ENST00000556821 AQRO60306 1485 aaKnown RBP eCLIP40.29■■■■■ 4.046e-8■■■■□ 24.8
PABPN1-207ENST00000556821 FGD5Q6ZNL6 1462 aa40.27■■■■■ 4.04
PABPN1-207ENST00000556821 RAD54L2Q9Y4B4 1467 aa40.21■■■■■ 4.03
PABPN1-207ENST00000556821 WDR97A6NE52 1622 aa40.17■■■■■ 4.02
PABPN1-207ENST00000556821 FBLN2P98095 1184 aa40.14■■■■■ 4.02
PABPN1-207ENST00000556821 SOGA1O94964 1423 aa40.13■■■■■ 4.01
PABPN1-207ENST00000556821 BIVM-ERCC5R4GMW8 1640 aa40.09■■■■■ 4.01
PABPN1-207ENST00000556821 CHD1O14646 1710 aa40.08■■■■■ 4.01
PABPN1-207ENST00000556821 TOP2BQ02880 1626 aa40.02■■■■■ 4
PABPN1-207ENST00000556821 SYNJ1O43426 1573 aa40.01■■■■■ 4
PABPN1-207ENST00000556821 WRNQ14191 1432 aaPredicted RBP eCLIP39.95■■■■□ 3.99
PABPN1-207ENST00000556821 TDRD9Q8NDG6 1382 aaKnown RBP39.95■■■■□ 3.99
PABPN1-207ENST00000556821 AEBP2Q6ZN18 517 aaPredicted RBP39.94■■■■□ 3.98
PABPN1-207ENST00000556821 PBRM1Q86U86 1689 aa39.9■■■■□ 3.98
PABPN1-207ENST00000556821 ABCA10Q8WWZ4 1543 aa39.86■■■■□ 3.97
PABPN1-207ENST00000556821 ABCA5Q8WWZ7 1642 aa39.85■■■■□ 3.97
PABPN1-207ENST00000556821 CLASP1Q7Z460 1538 aa39.85■■■■□ 3.97
PABPN1-207ENST00000556821 SNAPC4Q5SXM2 1469 aa39.77■■■■□ 3.96
PABPN1-207ENST00000556821 CHMP7Q8WUX9 453 aaPredicted RBP39.76■■■■□ 3.96
PABPN1-207ENST00000556821 GRIN2BQ13224 1484 aa39.74■■■■□ 3.95
PABPN1-207ENST00000556821 GAPVD1Q14C86 1478 aa39.72■■■■□ 3.95
PABPN1-207ENST00000556821 MAGI1Q96QZ7 1491 aaPredicted RBP39.69■■■■□ 3.94
PABPN1-207ENST00000556821 SYNJ2O15056 1496 aa39.54■■■■□ 3.92
PABPN1-207ENST00000556821 ADAMTS12P58397 1594 aa39.46■■■■□ 3.91
PABPN1-207ENST00000556821 ERICH3Q5RHP9 1530 aa39.39■■■■□ 3.9
PABPN1-207ENST00000556821 GRIN2AQ12879 1464 aa39.27■■■■□ 3.88
PABPN1-207ENST00000556821 FHAD1B1AJZ9 1412 aa39.22■■■■□ 3.87
PABPN1-207ENST00000556821 CEP170Q5SW79 1584 aa39.18■■■■□ 3.86
PABPN1-207ENST00000556821 ERCC6L2Q5T890 1561 aa39.15■■■■□ 3.86
PABPN1-207ENST00000556821 NUP160Q12769 1436 aa39.11■■■■□ 3.85
PABPN1-207ENST00000556821 KIF27Q86VH2 1401 aa39.09■■■■□ 3.85
PABPN1-207ENST00000556821 CUL7Q14999 1698 aa39.06■■■■□ 3.84
PABPN1-207ENST00000556821 SHROOM2Q13796 1616 aa38.99■■■■□ 3.83
PABPN1-207ENST00000556821 IGF1RP08069 1367 aa38.95■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms