RNA–Protein interactions for RNA: ENST00000377313.5

MEN1-204, Transcript of menin 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MEN1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEN1-204ENST00000377313 NISCHQ9Y2I1 1504 aa57.08■■■■■ 6.73
MEN1-204ENST00000377313 CCDC180Q9P1Z9 1646 aa49.91■■■■■ 5.58
MEN1-204ENST00000377313 ZCCHC6Q5VYS8 1495 aaKnown RBP47.94■■■■■ 5.27
MEN1-204ENST00000377313 ABCC9O60706 1549 aa47.32■■■■■ 5.17
MEN1-204ENST00000377313 DCAF1Q9Y4B6 1507 aa47.22■■■■■ 5.15
MEN1-204ENST00000377313 DCAF8L2P0C7V8 631 aa47.04■■■■■ 5.12
MEN1-204ENST00000377313 MYO15BQ96JP2 1530 aa46.73■■■■■ 5.07
MEN1-204ENST00000377313 NACADO15069 1562 aa46.49■■■■■ 5.03
MEN1-204ENST00000377313 SHROOM4Q9ULL8 1493 aa46.34■■■■■ 5.01
MEN1-204ENST00000377313 RB1CC1Q8TDY2 1594 aa46.14■■■■■ 4.98
MEN1-204ENST00000377313 SCRIBQ14160 1630 aa45.84■■■■■ 4.93
MEN1-204ENST00000377313 UNC13AQ9UPW8 1703 aa45.28■■■■■ 4.84
MEN1-204ENST00000377313 BICRAQ9NZM4 1560 aa44.81■■■■■ 4.76
MEN1-204ENST00000377313 PABPN1Q86U42 306 aaKnown RBP eCLIP44.53■■■■■ 4.72
MEN1-204ENST00000377313 SUPT5HO00267 1087 aaKnown RBP44.42■■■■■ 4.7
MEN1-204ENST00000377313 CECR2Q9BXF3 1484 aa44.37■■■■■ 4.69
MEN1-204ENST00000377313 RSF1Q96T23 1441 aaPredicted RBP44.18■■■■■ 4.66
MEN1-204ENST00000377313 MROH2BQ7Z745 1585 aa44.1■■■■■ 4.65
MEN1-204ENST00000377313 BAZ1AQ9NRL2 1556 aaPredicted RBP44.08■■■■■ 4.65
MEN1-204ENST00000377313 SMARCA4P51532 1647 aa43.94■■■■■ 4.62
MEN1-204ENST00000377313 WIZO95785 1651 aa43.73■■■■■ 4.59
MEN1-204ENST00000377313 EIF4G1Q04637 1599 aaKnown RBP43.45■■■■■ 4.55
MEN1-204ENST00000377313 PEG3Q9GZU2 1588 aa43.44■■■■■ 4.54
MEN1-204ENST00000377313 TOP2AP11388 1531 aaKnown RBP43.27■■■■■ 4.52
MEN1-204ENST00000377313 ATAD2BQ9ULI0 1458 aa43.25■■■■■ 4.51
MEN1-204ENST00000377313 SMARCA2P51531 1590 aa43.21■■■■■ 4.51
MEN1-204ENST00000377313 BAZ1BQ9UIG0 1483 aaKnown RBP42.97■■■■■ 4.47
MEN1-204ENST00000377313 NCAPD3P42695 1498 aa42.9■■■■■ 4.46
MEN1-204ENST00000377313 HMGXB3Q12766 1538 aa42.87■■■■■ 4.45
MEN1-204ENST00000377313 CC2D2AQ9P2K1 1620 aa42.85■■■■■ 4.45
MEN1-204ENST00000377313 CCDC88BA6NC98 1476 aa42.8■■■■■ 4.44
MEN1-204ENST00000377313 CHIC1Q5VXU3 224 aa42.46■■■■■ 4.39
MEN1-204ENST00000377313 CFTRP13569 1480 aa41.9■■■■■ 4.3
MEN1-204ENST00000377313 DNAJC5BQ9UF47 199 aa41.9■■■■■ 4.3
MEN1-204ENST00000377313 ABCC8Q09428 1581 aa41.85■■■■■ 4.29
MEN1-204ENST00000377313 TRIM41Q8WV44 630 aa41.79■■■■■ 4.28
MEN1-204ENST00000377313 CADPSQ9ULU8 1353 aa41.76■■■■■ 4.28
MEN1-204ENST00000377313 PRDM2Q13029 1718 aa41.73■■■■■ 4.27
MEN1-204ENST00000377313 WRNQ14191 1432 aaPredicted RBP eCLIP41.58■■■■■ 4.25
MEN1-204ENST00000377313 NESP48681 1621 aa41.5■■■■■ 4.23
MEN1-204ENST00000377313 LAMC3Q9Y6N6 1575 aa41.5■■■■■ 4.23
MEN1-204ENST00000377313 SYNJ1O43426 1573 aa41.47■■■■■ 4.23
MEN1-204ENST00000377313 FANCD2Q9BXW9 1451 aa41.32■■■■■ 4.21
MEN1-204ENST00000377313 TOP2BQ02880 1626 aa41.31■■■■■ 4.2
MEN1-204ENST00000377313 BIVM-ERCC5R4GMW8 1640 aa41.3■■■■■ 4.2
MEN1-204ENST00000377313 CUX1P39880 1505 aa41.25■■■■■ 4.19
MEN1-204ENST00000377313 PDS5BQ9NTI5 1447 aa41.12■■■■■ 4.17
MEN1-204ENST00000377313 CEP164Q9UPV0 1460 aa41.09■■■■■ 4.17
MEN1-204ENST00000377313 KIF21AQ7Z4S6 1674 aa41.04■■■■■ 4.16
MEN1-204ENST00000377313 FAM9AQ8IZU1 332 aaPredicted RBP41.01■■■■■ 4.16
MEN1-204ENST00000377313 SOGA1O94964 1423 aa41■■■■■ 4.15
MEN1-204ENST00000377313 DNMBPQ6XZF7 1577 aa40.94■■■■■ 4.15
MEN1-204ENST00000377313 RUSC2Q8N2Y8 1516 aa40.87■■■■■ 4.13
MEN1-204ENST00000377313 TOPBP1Q92547 1522 aa40.87■■■■■ 4.13
MEN1-204ENST00000377313 EEA1Q15075 1411 aa40.85■■■■■ 4.13
MEN1-204ENST00000377313 URB2Q14146 1524 aaKnown RBP40.85■■■■■ 4.13
MEN1-204ENST00000377313 FGD5Q6ZNL6 1462 aa40.81■■■■■ 4.12
MEN1-204ENST00000377313 LOC105371045A0A1W2PR82 267 aa40.8■■■■■ 4.12
MEN1-204ENST00000377313 POLA1P09884 1462 aaPredicted RBP40.66■■■■■ 4.1
MEN1-204ENST00000377313 MRC2Q9UBG0 1479 aa40.65■■■■■ 4.1
MEN1-204ENST00000377313 CSRNP3Q8WYN3 585 aa40.6■■■■■ 4.09
MEN1-204ENST00000377313 ERCC6Q03468 1493 aa40.56■■■■■ 4.08
MEN1-204ENST00000377313 KIF27Q86VH2 1401 aa40.52■■■■■ 4.08
MEN1-204ENST00000377313 RAD54L2Q9Y4B4 1467 aa40.51■■■■■ 4.07
MEN1-204ENST00000377313 WDR62O43379 1518 aa40.48■■■■■ 4.07
MEN1-204ENST00000377313 CUX2O14529 1486 aa40.48■■■■■ 4.07
MEN1-204ENST00000377313 ABCA10Q8WWZ4 1543 aa40.46■■■■■ 4.07
MEN1-204ENST00000377313 THOC2Q8NI27 1593 aaKnown RBP40.44■■■■■ 4.06
MEN1-204ENST00000377313 EHMT2Q96KQ7 1210 aa40.43■■■■■ 4.06
MEN1-204ENST00000377313 WDR97A6NE52 1622 aa40.42■■■■■ 4.06
MEN1-204ENST00000377313 KIF21BO75037 1637 aa40.39■■■■■ 4.06
MEN1-204ENST00000377313 TARBP1Q13395 1621 aaKnown RBP40.31■■■■■ 4.04
MEN1-204ENST00000377313 GOLGA3Q08378 1498 aa40.29■■■■■ 4.04
MEN1-204ENST00000377313 PRXQ9BXM0 1461 aa40.25■■■■■ 4.03
MEN1-204ENST00000377313 IGF1RP08069 1367 aa40.19■■■■■ 4.02
MEN1-204ENST00000377313 ABCA5Q8WWZ7 1642 aa40.19■■■■■ 4.02
MEN1-204ENST00000377313 RAPGEF2Q9Y4G8 1499 aa40.18■■■■■ 4.02
MEN1-204ENST00000377313 ERICH3Q5RHP9 1530 aa40.15■■■■■ 4.02
MEN1-204ENST00000377313 IFT140Q96RY7 1462 aa40.11■■■■■ 4.01
MEN1-204ENST00000377313 TNIKQ9UKE5 1360 aa40.11■■■■■ 4.01
MEN1-204ENST00000377313 TDRD9Q8NDG6 1382 aaKnown RBP40.1■■■■■ 4.01
MEN1-204ENST00000377313 GAPVD1Q14C86 1478 aa40.05■■■■■ 4
MEN1-204ENST00000377313 UBTFP17480 764 aaKnown RBP40.02■■■■■ 4
MEN1-204ENST00000377313 CARMIL1Q5VZK9 1371 aa39.98■■■■□ 3.99
MEN1-204ENST00000377313 CUL7Q14999 1698 aa39.95■■■■□ 3.99
MEN1-204ENST00000377313 ZNF608Q9ULD9 1512 aaPredicted RBP39.92■■■■□ 3.98
MEN1-204ENST00000377313 PBRM1Q86U86 1689 aa39.9■■■■□ 3.98
MEN1-204ENST00000377313 CEP162Q5TB80 1403 aa39.9■■■■□ 3.98
MEN1-204ENST00000377313 AQRO60306 1485 aaKnown RBP eCLIP39.9■■■■□ 3.982e-6■■■■■ 28.3
MEN1-204ENST00000377313 EIF4G3O43432 1585 aaKnown RBP39.82■■■■□ 3.96
MEN1-204ENST00000377313 GRIN2BQ13224 1484 aa39.76■■■■□ 3.96
MEN1-204ENST00000377313 ADAMTS12P58397 1594 aa39.67■■■■□ 3.94
MEN1-204ENST00000377313 CLIP1P30622 1438 aa39.62■■■■□ 3.93
MEN1-204ENST00000377313 FHAD1B1AJZ9 1412 aa39.6■■■■□ 3.93
MEN1-204ENST00000377313 SNAPC4Q5SXM2 1469 aa39.55■■■■□ 3.92
MEN1-204ENST00000377313 CTTNBP2Q8WZ74 1663 aa39.5■■■■□ 3.91
MEN1-204ENST00000377313 MAGI1Q96QZ7 1491 aaPredicted RBP39.46■■■■□ 3.91
MEN1-204ENST00000377313 RANGAP1P46060 587 aaPredicted RBP39.44■■■■□ 3.9
MEN1-204ENST00000377313 ARHGAP35Q9NRY4 1499 aa39.34■■■■□ 3.89
MEN1-204ENST00000377313 ARAP1Q96P48 1450 aa39.32■■■■□ 3.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms