RNA–Protein interactions for RNA: ENST00000383843.9

SUMF1-202, Transcript of sulfatase modifying factor 1, humanhuman

TSL 2 BASIC

Gene SUMF1, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-202ENST00000383843 NISCHQ9Y2I1 1504 aa55.56■■■■■ 6.48
SUMF1-202ENST00000383843 CCDC180Q9P1Z9 1646 aa49.42■■■■■ 5.5
SUMF1-202ENST00000383843 ABCC9O60706 1549 aa49.02■■■■■ 5.44
SUMF1-202ENST00000383843 DCAF8L2P0C7V8 631 aa46.83■■■■■ 5.09
SUMF1-202ENST00000383843 RB1CC1Q8TDY2 1594 aa46.79■■■■■ 5.08
SUMF1-202ENST00000383843 NACADO15069 1562 aa46.62■■■■■ 5.05
SUMF1-202ENST00000383843 ZCCHC6Q5VYS8 1495 aaKnown RBP46.15■■■■■ 4.98
SUMF1-202ENST00000383843 MYO15BQ96JP2 1530 aa46.13■■■■■ 4.98
SUMF1-202ENST00000383843 PABPN1Q86U42 306 aaKnown RBP eCLIP45.86■■■■■ 4.93
SUMF1-202ENST00000383843 DCAF1Q9Y4B6 1507 aa45.82■■■■■ 4.93
SUMF1-202ENST00000383843 UNC13AQ9UPW8 1703 aa45.78■■■■■ 4.92
SUMF1-202ENST00000383843 DNAJC5BQ9UF47 199 aa45.53■■■■■ 4.88
SUMF1-202ENST00000383843 BICRAQ9NZM4 1560 aa45.49■■■■■ 4.87
SUMF1-202ENST00000383843 SCRIBQ14160 1630 aa45.25■■■■■ 4.83
SUMF1-202ENST00000383843 SHROOM4Q9ULL8 1493 aa44.73■■■■■ 4.75
SUMF1-202ENST00000383843 EIF4G1Q04637 1599 aaKnown RBP44.28■■■■■ 4.68
SUMF1-202ENST00000383843 CC2D2AQ9P2K1 1620 aa44.23■■■■■ 4.67
SUMF1-202ENST00000383843 CECR2Q9BXF3 1484 aa44.04■■■■■ 4.64
SUMF1-202ENST00000383843 SMARCA4P51532 1647 aa43.17■■■■■ 4.5
SUMF1-202ENST00000383843 ATAD2BQ9ULI0 1458 aa43.09■■■■■ 4.49
SUMF1-202ENST00000383843 NCAPD3P42695 1498 aa43.09■■■■■ 4.49
SUMF1-202ENST00000383843 BAZ1AQ9NRL2 1556 aaPredicted RBP43.02■■■■■ 4.48
SUMF1-202ENST00000383843 SMARCA2P51531 1590 aa42.92■■■■■ 4.46
SUMF1-202ENST00000383843 MROH2BQ7Z745 1585 aa42.88■■■■■ 4.45
SUMF1-202ENST00000383843 HMGXB3Q12766 1538 aa42.76■■■■■ 4.44
SUMF1-202ENST00000383843 BAZ1BQ9UIG0 1483 aaKnown RBP42.68■■■■■ 4.42
SUMF1-202ENST00000383843 PEG3Q9GZU2 1588 aa42.68■■■■■ 4.42
SUMF1-202ENST00000383843 WIZO95785 1651 aa42.38■■■■■ 4.38
SUMF1-202ENST00000383843 NESP48681 1621 aa42.33■■■■■ 4.37
SUMF1-202ENST00000383843 RSF1Q96T23 1441 aaPredicted RBP42.24■■■■■ 4.35
SUMF1-202ENST00000383843 ERCC6Q03468 1493 aa42.21■■■■■ 4.35
SUMF1-202ENST00000383843 LAMC3Q9Y6N6 1575 aa41.95■■■■■ 4.31
SUMF1-202ENST00000383843 CADPSQ9ULU8 1353 aa41.86■■■■■ 4.29
SUMF1-202ENST00000383843 CUX2O14529 1486 aa41.82■■■■■ 4.29
SUMF1-202ENST00000383843 TOP2AP11388 1531 aaKnown RBP41.82■■■■■ 4.28
SUMF1-202ENST00000383843 PDS5BQ9NTI5 1447 aa41.74■■■■■ 4.27
SUMF1-202ENST00000383843 KIF21AQ7Z4S6 1674 aa41.7■■■■■ 4.27
SUMF1-202ENST00000383843 THOC2Q8NI27 1593 aaKnown RBP41.62■■■■■ 4.25
SUMF1-202ENST00000383843 CFTRP13569 1480 aa41.49■■■■■ 4.23
SUMF1-202ENST00000383843 CCDC88BA6NC98 1476 aa41.44■■■■■ 4.22
SUMF1-202ENST00000383843 FANCD2Q9BXW9 1451 aa41.38■■■■■ 4.21
SUMF1-202ENST00000383843 MRC2Q9UBG0 1479 aa41.35■■■■■ 4.21
SUMF1-202ENST00000383843 CEP164Q9UPV0 1460 aa41.31■■■■■ 4.2
SUMF1-202ENST00000383843 DNAJC5Q9H3Z4 198 aa41.2■■■■■ 4.19
SUMF1-202ENST00000383843 WDR62O43379 1518 aa41.2■■■■■ 4.19
SUMF1-202ENST00000383843 URB2Q14146 1524 aaKnown RBP41.02■■■■■ 4.16
SUMF1-202ENST00000383843 SUPT5HO00267 1087 aaKnown RBP41.01■■■■■ 4.15
SUMF1-202ENST00000383843 PRDM2Q13029 1718 aa41■■■■■ 4.15
SUMF1-202ENST00000383843 TOPBP1Q92547 1522 aa40.66■■■■■ 4.1
SUMF1-202ENST00000383843 DNMBPQ6XZF7 1577 aa40.52■■■■■ 4.08
SUMF1-202ENST00000383843 ABCC8Q09428 1581 aa40.51■■■■■ 4.08
SUMF1-202ENST00000383843 IFT140Q96RY7 1462 aa40.46■■■■■ 4.07
SUMF1-202ENST00000383843 ZNF608Q9ULD9 1512 aaPredicted RBP40.45■■■■■ 4.07
SUMF1-202ENST00000383843 POLA1P09884 1462 aaPredicted RBP40.3■■■■■ 4.04
SUMF1-202ENST00000383843 CUX1P39880 1505 aa40.23■■■■■ 4.03
SUMF1-202ENST00000383843 TARBP1Q13395 1621 aaKnown RBP40.23■■■■■ 4.03
SUMF1-202ENST00000383843 RAD54L2Q9Y4B4 1467 aa40.23■■■■■ 4.03
SUMF1-202ENST00000383843 AQRO60306 1485 aaKnown RBP eCLIP40.18■■■■■ 4.02
SUMF1-202ENST00000383843 SOGA1O94964 1423 aa40.16■■■■■ 4.02
SUMF1-202ENST00000383843 OSCARQ8IYS5 282 aa40.16■■■■■ 4.02
SUMF1-202ENST00000383843 EIF4G3O43432 1585 aaKnown RBP40.14■■■■■ 4.02
SUMF1-202ENST00000383843 FGD5Q6ZNL6 1462 aa40.14■■■■■ 4.02
SUMF1-202ENST00000383843 TDRD9Q8NDG6 1382 aaKnown RBP40.06■■■■■ 4
SUMF1-202ENST00000383843 FBLN2P98095 1184 aa39.82■■■■□ 3.97
SUMF1-202ENST00000383843 WRNQ14191 1432 aaPredicted RBP eCLIP39.79■■■■□ 3.96
SUMF1-202ENST00000383843 TRIM41Q8WV44 630 aa39.77■■■■□ 3.96
SUMF1-202ENST00000383843 SYNJ1O43426 1573 aa39.74■■■■□ 3.95
SUMF1-202ENST00000383843 WDR97A6NE52 1622 aa39.73■■■■□ 3.95
SUMF1-202ENST00000383843 CHD1O14646 1710 aa39.73■■■■□ 3.95
SUMF1-202ENST00000383843 SNAPC4Q5SXM2 1469 aa39.72■■■■□ 3.95
SUMF1-202ENST00000383843 TOP2BQ02880 1626 aa39.69■■■■□ 3.94
SUMF1-202ENST00000383843 ABCA10Q8WWZ4 1543 aa39.68■■■■□ 3.94
SUMF1-202ENST00000383843 GRIN2BQ13224 1484 aa39.67■■■■□ 3.94
SUMF1-202ENST00000383843 BIVM-ERCC5R4GMW8 1640 aa39.66■■■■□ 3.94
SUMF1-202ENST00000383843 GAPVD1Q14C86 1478 aa39.65■■■■□ 3.94
SUMF1-202ENST00000383843 CHMP7Q8WUX9 453 aaPredicted RBP39.58■■■■□ 3.93
SUMF1-202ENST00000383843 MAGI1Q96QZ7 1491 aaPredicted RBP39.56■■■■□ 3.92
SUMF1-202ENST00000383843 ABCA5Q8WWZ7 1642 aa39.54■■■■□ 3.92
SUMF1-202ENST00000383843 PBRM1Q86U86 1689 aa39.52■■■■□ 3.92
SUMF1-202ENST00000383843 RIMBP3CA6NJZ7 1639 aa39.51■■■■□ 3.92
SUMF1-202ENST00000383843 RIMBP3BA6NNM3 1639 aa39.51■■■■□ 3.92
SUMF1-202ENST00000383843 RIMBP3Q9UFD9 1639 aa39.51■■■■□ 3.92
SUMF1-202ENST00000383843 ARHGEF11O15085 1522 aa39.46■■■■□ 3.91
SUMF1-202ENST00000383843 SYNJ2O15056 1496 aa39.45■■■■□ 3.91
SUMF1-202ENST00000383843 CLASP1Q7Z460 1538 aa39.28■■■■□ 3.88
SUMF1-202ENST00000383843 CYB5RLQ6IPT4 315 aa39.25■■■■□ 3.87
SUMF1-202ENST00000383843 ADAMTS12P58397 1594 aa39.2■■■■□ 3.87
SUMF1-202ENST00000383843 GRIN2AQ12879 1464 aa39.17■■■■□ 3.86
SUMF1-202ENST00000383843 ERICH3Q5RHP9 1530 aa39.16■■■■□ 3.86
SUMF1-202ENST00000383843 FHAD1B1AJZ9 1412 aa39.15■■■■□ 3.86
SUMF1-202ENST00000383843 ARAP1Q96P48 1450 aa39.14■■■■□ 3.86
SUMF1-202ENST00000383843 CEP170Q5SW79 1584 aa39.02■■■■□ 3.84
SUMF1-202ENST00000383843 NUP160Q12769 1436 aa39■■■■□ 3.83
SUMF1-202ENST00000383843 KIF27Q86VH2 1401 aa38.96■■■■□ 3.83
SUMF1-202ENST00000383843 IGF1RP08069 1367 aa38.96■■■■□ 3.83
SUMF1-202ENST00000383843 ERCC6L2Q5T890 1561 aa38.84■■■■□ 3.81
SUMF1-202ENST00000383843 SHROOM2Q13796 1616 aa38.71■■■■□ 3.79
SUMF1-202ENST00000383843 JPH4Q96JJ6 628 aa38.71■■■■□ 3.79
SUMF1-202ENST00000383843 CARMIL1Q5VZK9 1371 aa38.69■■■■□ 3.78
SUMF1-202ENST00000383843 CUL7Q14999 1698 aa38.68■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms