RNA–Protein interactions for RNA: ENST00000359228.3

LYPD2-201, Transcript of LY6/PLAUR domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYPD2, Length 594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD2-201ENST00000359228 NISCHQ9Y2I1 1504 aa55.22■■■■■ 6.43
LYPD2-201ENST00000359228 CCDC180Q9P1Z9 1646 aa49.32■■■■■ 5.49
LYPD2-201ENST00000359228 ABCC9O60706 1549 aa48.69■■■■■ 5.39
LYPD2-201ENST00000359228 RB1CC1Q8TDY2 1594 aa46.68■■■■■ 5.06
LYPD2-201ENST00000359228 NACADO15069 1562 aa46.52■■■■■ 5.04
LYPD2-201ENST00000359228 DCAF8L2P0C7V8 631 aa46.27■■■■■ 5
LYPD2-201ENST00000359228 MYO15BQ96JP2 1530 aa46.15■■■■■ 4.98
LYPD2-201ENST00000359228 ZCCHC6Q5VYS8 1495 aaKnown RBP45.87■■■■■ 4.93
LYPD2-201ENST00000359228 DCAF1Q9Y4B6 1507 aa45.73■■■■■ 4.91
LYPD2-201ENST00000359228 UNC13AQ9UPW8 1703 aa45.56■■■■■ 4.88
LYPD2-201ENST00000359228 PABPN1Q86U42 306 aaKnown RBP eCLIP45.42■■■■■ 4.86
LYPD2-201ENST00000359228 BICRAQ9NZM4 1560 aa45.28■■■■■ 4.84
LYPD2-201ENST00000359228 DNAJC5BQ9UF47 199 aa45.25■■■■■ 4.83
LYPD2-201ENST00000359228 SCRIBQ14160 1630 aa44.86■■■■■ 4.77
LYPD2-201ENST00000359228 SHROOM4Q9ULL8 1493 aa44.84■■■■■ 4.77
LYPD2-201ENST00000359228 EIF4G1Q04637 1599 aaKnown RBP44.11■■■■■ 4.65
LYPD2-201ENST00000359228 CC2D2AQ9P2K1 1620 aa44.06■■■■■ 4.64
LYPD2-201ENST00000359228 CECR2Q9BXF3 1484 aa43.86■■■■■ 4.61
LYPD2-201ENST00000359228 NCAPD3P42695 1498 aa42.97■■■■■ 4.47
LYPD2-201ENST00000359228 SMARCA4P51532 1647 aa42.93■■■■■ 4.46
LYPD2-201ENST00000359228 ATAD2BQ9ULI0 1458 aa42.87■■■■■ 4.45
LYPD2-201ENST00000359228 BAZ1AQ9NRL2 1556 aaPredicted RBP42.82■■■■■ 4.45
LYPD2-201ENST00000359228 SMARCA2P51531 1590 aa42.79■■■■■ 4.44
LYPD2-201ENST00000359228 HMGXB3Q12766 1538 aa42.66■■■■■ 4.42
LYPD2-201ENST00000359228 PEG3Q9GZU2 1588 aa42.59■■■■■ 4.41
LYPD2-201ENST00000359228 MROH2BQ7Z745 1585 aa42.51■■■■■ 4.4
LYPD2-201ENST00000359228 BAZ1BQ9UIG0 1483 aaKnown RBP42.44■■■■■ 4.38
LYPD2-201ENST00000359228 ERCC6Q03468 1493 aa42.02■■■■■ 4.32
LYPD2-201ENST00000359228 WIZO95785 1651 aa42■■■■■ 4.31
LYPD2-201ENST00000359228 NESP48681 1621 aa41.99■■■■■ 4.31
LYPD2-201ENST00000359228 LAMC3Q9Y6N6 1575 aa41.88■■■■■ 4.29
LYPD2-201ENST00000359228 RSF1Q96T23 1441 aaPredicted RBP41.87■■■■■ 4.29
LYPD2-201ENST00000359228 CUX2O14529 1486 aa41.85■■■■■ 4.29
LYPD2-201ENST00000359228 CADPSQ9ULU8 1353 aa41.66■■■■■ 4.26
LYPD2-201ENST00000359228 PDS5BQ9NTI5 1447 aa41.63■■■■■ 4.26
LYPD2-201ENST00000359228 TOP2AP11388 1531 aaKnown RBP41.55■■■■■ 4.24
LYPD2-201ENST00000359228 THOC2Q8NI27 1593 aaKnown RBP41.48■■■■■ 4.23
LYPD2-201ENST00000359228 KIF21AQ7Z4S6 1674 aa41.46■■■■■ 4.23
LYPD2-201ENST00000359228 CFTRP13569 1480 aa41.3■■■■■ 4.2
LYPD2-201ENST00000359228 DNAJC5Q9H3Z4 198 aa41.24■■■■■ 4.19
LYPD2-201ENST00000359228 MRC2Q9UBG0 1479 aa41.19■■■■■ 4.18
LYPD2-201ENST00000359228 FANCD2Q9BXW9 1451 aa41.14■■■■■ 4.18
LYPD2-201ENST00000359228 CEP164Q9UPV0 1460 aa41.13■■■■■ 4.17
LYPD2-201ENST00000359228 CCDC88BA6NC98 1476 aa41.09■■■■■ 4.17
LYPD2-201ENST00000359228 WDR62O43379 1518 aa41.08■■■■■ 4.17
LYPD2-201ENST00000359228 PRDM2Q13029 1718 aa40.88■■■■■ 4.13
LYPD2-201ENST00000359228 URB2Q14146 1524 aaKnown RBP40.76■■■■■ 4.12
LYPD2-201ENST00000359228 ABCC8Q09428 1581 aa40.46■■■■■ 4.07
LYPD2-201ENST00000359228 TOPBP1Q92547 1522 aa40.42■■■■■ 4.06
LYPD2-201ENST00000359228 DNMBPQ6XZF7 1577 aa40.33■■■■■ 4.05
LYPD2-201ENST00000359228 SUPT5HO00267 1087 aaKnown RBP40.33■■■■■ 4.05
LYPD2-201ENST00000359228 IFT140Q96RY7 1462 aa40.32■■■■■ 4.04
LYPD2-201ENST00000359228 ZNF608Q9ULD9 1512 aaPredicted RBP40.14■■■■■ 4.02
LYPD2-201ENST00000359228 OSCARQ8IYS5 282 aa40.05■■■■■ 4
LYPD2-201ENST00000359228 POLA1P09884 1462 aaPredicted RBP40.04■■■■■ 4
LYPD2-201ENST00000359228 TARBP1Q13395 1621 aaKnown RBP40.04■■■■■ 4
LYPD2-201ENST00000359228 EIF4G3O43432 1585 aaKnown RBP39.93■■■■□ 3.98
LYPD2-201ENST00000359228 CUX1P39880 1505 aa39.91■■■■□ 3.98
LYPD2-201ENST00000359228 SOGA1O94964 1423 aa39.9■■■■□ 3.98
LYPD2-201ENST00000359228 AQRO60306 1485 aaKnown RBP eCLIP39.86■■■■□ 3.97
LYPD2-201ENST00000359228 FGD5Q6ZNL6 1462 aa39.85■■■■□ 3.97
LYPD2-201ENST00000359228 RAD54L2Q9Y4B4 1467 aa39.85■■■■□ 3.97
LYPD2-201ENST00000359228 WDR97A6NE52 1622 aa39.73■■■■□ 3.95
LYPD2-201ENST00000359228 TDRD9Q8NDG6 1382 aaKnown RBP39.71■■■■□ 3.95
LYPD2-201ENST00000359228 CHD1O14646 1710 aa39.52■■■■□ 3.92
LYPD2-201ENST00000359228 TRIM41Q8WV44 630 aa39.5■■■■□ 3.91
LYPD2-201ENST00000359228 ABCA10Q8WWZ4 1543 aa39.49■■■■□ 3.91
LYPD2-201ENST00000359228 GRIN2BQ13224 1484 aa39.49■■■■□ 3.91
LYPD2-201ENST00000359228 WRNQ14191 1432 aaPredicted RBP eCLIP39.47■■■■□ 3.91
LYPD2-201ENST00000359228 FBLN2P98095 1184 aa39.46■■■■□ 3.91
LYPD2-201ENST00000359228 SNAPC4Q5SXM2 1469 aa39.45■■■■□ 3.91
LYPD2-201ENST00000359228 TOP2BQ02880 1626 aa39.45■■■■□ 3.91
LYPD2-201ENST00000359228 MAGI1Q96QZ7 1491 aaPredicted RBP39.44■■■■□ 3.9
LYPD2-201ENST00000359228 BIVM-ERCC5R4GMW8 1640 aa39.43■■■■□ 3.9
LYPD2-201ENST00000359228 GAPVD1Q14C86 1478 aa39.41■■■■□ 3.9
LYPD2-201ENST00000359228 RIMBP3CA6NJZ7 1639 aa39.37■■■■□ 3.89
LYPD2-201ENST00000359228 RIMBP3BA6NNM3 1639 aa39.37■■■■□ 3.89
LYPD2-201ENST00000359228 RIMBP3Q9UFD9 1639 aa39.37■■■■□ 3.89
LYPD2-201ENST00000359228 SYNJ1O43426 1573 aa39.36■■■■□ 3.89
LYPD2-201ENST00000359228 ABCA5Q8WWZ7 1642 aa39.33■■■■□ 3.89
LYPD2-201ENST00000359228 CHMP7Q8WUX9 453 aaPredicted RBP39.33■■■■□ 3.89
LYPD2-201ENST00000359228 ARHGEF11O15085 1522 aa39.32■■■■□ 3.89
LYPD2-201ENST00000359228 SYNJ2O15056 1496 aa39.3■■■■□ 3.88
LYPD2-201ENST00000359228 PBRM1Q86U86 1689 aa39.29■■■■□ 3.88
LYPD2-201ENST00000359228 CLASP1Q7Z460 1538 aa39.14■■■■□ 3.86
LYPD2-201ENST00000359228 ERICH3Q5RHP9 1530 aa39.01■■■■□ 3.84
LYPD2-201ENST00000359228 CYB5RLQ6IPT4 315 aa39.01■■■■□ 3.84
LYPD2-201ENST00000359228 ADAMTS12P58397 1594 aa38.97■■■■□ 3.83
LYPD2-201ENST00000359228 ARAP1Q96P48 1450 aa38.97■■■■□ 3.83
LYPD2-201ENST00000359228 GRIN2AQ12879 1464 aa38.96■■■■□ 3.83
LYPD2-201ENST00000359228 FHAD1B1AJZ9 1412 aa38.96■■■■□ 3.83
LYPD2-201ENST00000359228 NUP160Q12769 1436 aa38.84■■■■□ 3.81
LYPD2-201ENST00000359228 CEP170Q5SW79 1584 aa38.76■■■■□ 3.8
LYPD2-201ENST00000359228 KIF27Q86VH2 1401 aa38.71■■■■□ 3.79
LYPD2-201ENST00000359228 IGF1RP08069 1367 aa38.66■■■■□ 3.78
LYPD2-201ENST00000359228 SHROOM2Q13796 1616 aa38.6■■■■□ 3.77
LYPD2-201ENST00000359228 CUL7Q14999 1698 aa38.52■■■■□ 3.76
LYPD2-201ENST00000359228 ERCC6L2Q5T890 1561 aa38.51■■■■□ 3.76
LYPD2-201ENST00000359228 JPH4Q96JJ6 628 aa38.47■■■■□ 3.75
LYPD2-201ENST00000359228 RUSC2Q8N2Y8 1516 aa38.41■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms