RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 NISCHQ9Y2I1 1504 aa55.15■■■■■ 6.42
CDKN2A-206ENST00000494262 CCDC180Q9P1Z9 1646 aa49.27■■■■■ 5.48
CDKN2A-206ENST00000494262 ABCC9O60706 1549 aa48.88■■■■■ 5.41
CDKN2A-206ENST00000494262 RB1CC1Q8TDY2 1594 aa46.7■■■■■ 5.07
CDKN2A-206ENST00000494262 NACADO15069 1562 aa46.48■■■■■ 5.03
CDKN2A-206ENST00000494262 DCAF8L2P0C7V8 631 aa46.41■■■■■ 5.02
CDKN2A-206ENST00000494262 MYO15BQ96JP2 1530 aa45.97■■■■■ 4.95
CDKN2A-206ENST00000494262 ZCCHC6Q5VYS8 1495 aaKnown RBP45.8■■■■■ 4.92
CDKN2A-206ENST00000494262 UNC13AQ9UPW8 1703 aa45.62■■■■■ 4.89
CDKN2A-206ENST00000494262 PABPN1Q86U42 306 aaKnown RBP eCLIP45.59■■■■■ 4.89
CDKN2A-206ENST00000494262 DCAF1Q9Y4B6 1507 aa45.56■■■■■ 4.88
CDKN2A-206ENST00000494262 DNAJC5BQ9UF47 199 aa45.41■■■■■ 4.86
CDKN2A-206ENST00000494262 BICRAQ9NZM4 1560 aa45.3■■■■■ 4.84
CDKN2A-206ENST00000494262 SCRIBQ14160 1630 aa44.97■■■■■ 4.79
CDKN2A-206ENST00000494262 SHROOM4Q9ULL8 1493 aa44.74■■■■■ 4.75
CDKN2A-206ENST00000494262 EIF4G1Q04637 1599 aaKnown RBP44.18■■■■■ 4.66
CDKN2A-206ENST00000494262 CC2D2AQ9P2K1 1620 aa44.15■■■■■ 4.66
CDKN2A-206ENST00000494262 CECR2Q9BXF3 1484 aa43.97■■■■■ 4.63
CDKN2A-206ENST00000494262 SMARCA4P51532 1647 aa42.92■■■■■ 4.46
CDKN2A-206ENST00000494262 NCAPD3P42695 1498 aa42.89■■■■■ 4.46
CDKN2A-206ENST00000494262 ATAD2BQ9ULI0 1458 aa42.85■■■■■ 4.45
CDKN2A-206ENST00000494262 BAZ1AQ9NRL2 1556 aaPredicted RBP42.78■■■■■ 4.44
CDKN2A-206ENST00000494262 SMARCA2P51531 1590 aa42.76■■■■■ 4.44
CDKN2A-206ENST00000494262 HMGXB3Q12766 1538 aa42.62■■■■■ 4.41
CDKN2A-206ENST00000494262 MROH2BQ7Z745 1585 aa42.51■■■■■ 4.4
CDKN2A-206ENST00000494262 BAZ1BQ9UIG0 1483 aaKnown RBP42.48■■■■■ 4.39
CDKN2A-206ENST00000494262 PEG3Q9GZU2 1588 aa42.48■■■■■ 4.39
CDKN2A-206ENST00000494262 ERCC6Q03468 1493 aa42.18■■■■■ 4.34
CDKN2A-206ENST00000494262 NESP48681 1621 aa42.11■■■■■ 4.33
CDKN2A-206ENST00000494262 WIZO95785 1651 aa42.02■■■■■ 4.32
CDKN2A-206ENST00000494262 CUX2O14529 1486 aa41.91■■■■■ 4.3
CDKN2A-206ENST00000494262 LAMC3Q9Y6N6 1575 aa41.86■■■■■ 4.29
CDKN2A-206ENST00000494262 RSF1Q96T23 1441 aaPredicted RBP41.79■■■■■ 4.28
CDKN2A-206ENST00000494262 CADPSQ9ULU8 1353 aa41.63■■■■■ 4.26
CDKN2A-206ENST00000494262 PDS5BQ9NTI5 1447 aa41.63■■■■■ 4.26
CDKN2A-206ENST00000494262 THOC2Q8NI27 1593 aaKnown RBP41.57■■■■■ 4.25
CDKN2A-206ENST00000494262 KIF21AQ7Z4S6 1674 aa41.57■■■■■ 4.25
CDKN2A-206ENST00000494262 TOP2AP11388 1531 aaKnown RBP41.52■■■■■ 4.24
CDKN2A-206ENST00000494262 DNAJC5Q9H3Z4 198 aa41.37■■■■■ 4.21
CDKN2A-206ENST00000494262 CFTRP13569 1480 aa41.25■■■■■ 4.19
CDKN2A-206ENST00000494262 MRC2Q9UBG0 1479 aa41.24■■■■■ 4.19
CDKN2A-206ENST00000494262 CEP164Q9UPV0 1460 aa41.18■■■■■ 4.18
CDKN2A-206ENST00000494262 FANCD2Q9BXW9 1451 aa41.17■■■■■ 4.18
CDKN2A-206ENST00000494262 WDR62O43379 1518 aa41.11■■■■■ 4.17
CDKN2A-206ENST00000494262 CCDC88BA6NC98 1476 aa41.05■■■■■ 4.16
CDKN2A-206ENST00000494262 PRDM2Q13029 1718 aa40.86■■■■■ 4.13
CDKN2A-206ENST00000494262 URB2Q14146 1524 aaKnown RBP40.8■■■■■ 4.12
CDKN2A-206ENST00000494262 TOPBP1Q92547 1522 aa40.44■■■■■ 4.06
CDKN2A-206ENST00000494262 ABCC8Q09428 1581 aa40.37■■■■■ 4.05
CDKN2A-206ENST00000494262 SUPT5HO00267 1087 aaKnown RBP40.34■■■■■ 4.05
CDKN2A-206ENST00000494262 IFT140Q96RY7 1462 aa40.33■■■■■ 4.05
CDKN2A-206ENST00000494262 DNMBPQ6XZF7 1577 aa40.33■■■■■ 4.05
CDKN2A-206ENST00000494262 ZNF608Q9ULD9 1512 aaPredicted RBP40.23■■■■■ 4.03
CDKN2A-206ENST00000494262 OSCARQ8IYS5 282 aa40.09■■■■■ 4.01
CDKN2A-206ENST00000494262 POLA1P09884 1462 aaPredicted RBP40.06■■■■■ 4
CDKN2A-206ENST00000494262 TARBP1Q13395 1621 aaKnown RBP40.03■■■■■ 4
CDKN2A-206ENST00000494262 EIF4G3O43432 1585 aaKnown RBP40.02■■■■■ 4
CDKN2A-206ENST00000494262 AQRO60306 1485 aaKnown RBP eCLIP39.93■■■■□ 3.98
CDKN2A-206ENST00000494262 RAD54L2Q9Y4B4 1467 aa39.92■■■■□ 3.98
CDKN2A-206ENST00000494262 CUX1P39880 1505 aa39.91■■■■□ 3.98
CDKN2A-206ENST00000494262 SOGA1O94964 1423 aa39.89■■■■□ 3.98
CDKN2A-206ENST00000494262 FGD5Q6ZNL6 1462 aa39.88■■■■□ 3.97
CDKN2A-206ENST00000494262 TRIM41Q8WV44 630 aa39.8■■■■□ 3.96
CDKN2A-206ENST00000494262 TDRD9Q8NDG6 1382 aaKnown RBP39.76■■■■□ 3.96
CDKN2A-206ENST00000494262 WDR97A6NE52 1622 aa39.65■■■■□ 3.94
CDKN2A-206ENST00000494262 CHD1O14646 1710 aa39.63■■■■□ 3.94
CDKN2A-206ENST00000494262 FBLN2P98095 1184 aa39.61■■■■□ 3.93
CDKN2A-206ENST00000494262 SNAPC4Q5SXM2 1469 aa39.55■■■■□ 3.92
CDKN2A-206ENST00000494262 RIMBP3CA6NJZ7 1639 aa39.51■■■■□ 3.92
CDKN2A-206ENST00000494262 RIMBP3BA6NNM3 1639 aa39.51■■■■□ 3.92
CDKN2A-206ENST00000494262 RIMBP3Q9UFD9 1639 aa39.51■■■■□ 3.92
CDKN2A-206ENST00000494262 GRIN2BQ13224 1484 aa39.49■■■■□ 3.91
CDKN2A-206ENST00000494262 ARHGEF11O15085 1522 aa39.44■■■■□ 3.9
CDKN2A-206ENST00000494262 ABCA10Q8WWZ4 1543 aa39.44■■■■□ 3.9
CDKN2A-206ENST00000494262 MAGI1Q96QZ7 1491 aaPredicted RBP39.43■■■■□ 3.9
CDKN2A-206ENST00000494262 WRNQ14191 1432 aaPredicted RBP eCLIP39.43■■■■□ 3.9
CDKN2A-206ENST00000494262 GAPVD1Q14C86 1478 aa39.42■■■■□ 3.9
CDKN2A-206ENST00000494262 TOP2BQ02880 1626 aa39.39■■■■□ 3.9
CDKN2A-206ENST00000494262 CHMP7Q8WUX9 453 aaPredicted RBP39.38■■■■□ 3.89
CDKN2A-206ENST00000494262 BIVM-ERCC5R4GMW8 1640 aa39.38■■■■□ 3.89
CDKN2A-206ENST00000494262 SYNJ1O43426 1573 aa39.37■■■■□ 3.89
CDKN2A-206ENST00000494262 PBRM1Q86U86 1689 aa39.35■■■■□ 3.89
CDKN2A-206ENST00000494262 ABCA5Q8WWZ7 1642 aa39.33■■■■□ 3.89
CDKN2A-206ENST00000494262 SYNJ2O15056 1496 aa39.3■■■■□ 3.88
CDKN2A-206ENST00000494262 CLASP1Q7Z460 1538 aa39.19■■■■□ 3.86
CDKN2A-206ENST00000494262 CYB5RLQ6IPT4 315 aa39.14■■■■□ 3.86
CDKN2A-206ENST00000494262 ARAP1Q96P48 1450 aa39.09■■■■□ 3.85
CDKN2A-206ENST00000494262 ADAMTS12P58397 1594 aa39.02■■■■□ 3.84
CDKN2A-206ENST00000494262 GRIN2AQ12879 1464 aa38.98■■■■□ 3.83
CDKN2A-206ENST00000494262 ERICH3Q5RHP9 1530 aa38.95■■■■□ 3.83
CDKN2A-206ENST00000494262 FHAD1B1AJZ9 1412 aa38.94■■■■□ 3.82
CDKN2A-206ENST00000494262 NUP160Q12769 1436 aa38.82■■■■□ 3.81
CDKN2A-206ENST00000494262 CEP170Q5SW79 1584 aa38.82■■■■□ 3.8
CDKN2A-206ENST00000494262 KIF27Q86VH2 1401 aa38.65■■■■□ 3.78
CDKN2A-206ENST00000494262 ERCC6L2Q5T890 1561 aa38.62■■■■□ 3.77
CDKN2A-206ENST00000494262 TRHP20396 242 aaPredicted RBP38.58■■■■□ 3.77
CDKN2A-206ENST00000494262 SHROOM2Q13796 1616 aa38.58■■■■□ 3.77
CDKN2A-206ENST00000494262 IGF1RP08069 1367 aa38.57■■■■□ 3.77
CDKN2A-206ENST00000494262 CUL7Q14999 1698 aa38.48■■■■□ 3.75
CDKN2A-206ENST00000494262 RUSC2Q8N2Y8 1516 aa38.45■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms