RNA–Protein interactions for RNA: ENST00000394259.5

PRICKLE4-201, Transcript of prickle planar cell polarity protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRICKLE4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4-201ENST00000394259 NISCHQ9Y2I1 1504 aa55.53■■■■■ 6.48
PRICKLE4-201ENST00000394259 CCDC180Q9P1Z9 1646 aa49.64■■■■■ 5.54
PRICKLE4-201ENST00000394259 ABCC9O60706 1549 aa48.97■■■■■ 5.43
PRICKLE4-201ENST00000394259 RB1CC1Q8TDY2 1594 aa46.9■■■■■ 5.1
PRICKLE4-201ENST00000394259 NACADO15069 1562 aa46.73■■■■■ 5.07
PRICKLE4-201ENST00000394259 DCAF8L2P0C7V8 631 aa46.52■■■■■ 5.04
PRICKLE4-201ENST00000394259 MYO15BQ96JP2 1530 aa46.28■■■■■ 5
PRICKLE4-201ENST00000394259 ZCCHC6Q5VYS8 1495 aaKnown RBP46.15■■■■■ 4.98
PRICKLE4-201ENST00000394259 UNC13AQ9UPW8 1703 aa46.03■■■■■ 4.96
PRICKLE4-201ENST00000394259 DCAF1Q9Y4B6 1507 aa45.91■■■■■ 4.94
PRICKLE4-201ENST00000394259 PABPN1Q86U42 306 aaKnown RBP eCLIP45.65■■■■■ 4.91e-7■■■■■ 27.8
PRICKLE4-201ENST00000394259 BICRAQ9NZM4 1560 aa45.57■■■■■ 4.89
PRICKLE4-201ENST00000394259 DNAJC5BQ9UF47 199 aa45.4■■■■■ 4.86
PRICKLE4-201ENST00000394259 SCRIBQ14160 1630 aa45.24■■■■■ 4.83
PRICKLE4-201ENST00000394259 SHROOM4Q9ULL8 1493 aa44.93■■■■■ 4.78
PRICKLE4-201ENST00000394259 EIF4G1Q04637 1599 aaKnown RBP44.35■■■■■ 4.69
PRICKLE4-201ENST00000394259 CC2D2AQ9P2K1 1620 aa44.32■■■■■ 4.69
PRICKLE4-201ENST00000394259 CECR2Q9BXF3 1484 aa44.03■■■■■ 4.64
PRICKLE4-201ENST00000394259 SMARCA4P51532 1647 aa43.23■■■■■ 4.51
PRICKLE4-201ENST00000394259 NCAPD3P42695 1498 aa43.09■■■■■ 4.49
PRICKLE4-201ENST00000394259 ATAD2BQ9ULI0 1458 aa43.06■■■■■ 4.48
PRICKLE4-201ENST00000394259 BAZ1AQ9NRL2 1556 aaPredicted RBP43.06■■■■■ 4.48
PRICKLE4-201ENST00000394259 SMARCA2P51531 1590 aa42.99■■■■■ 4.47
PRICKLE4-201ENST00000394259 HMGXB3Q12766 1538 aa42.87■■■■■ 4.45
PRICKLE4-201ENST00000394259 MROH2BQ7Z745 1585 aa42.81■■■■■ 4.44
PRICKLE4-201ENST00000394259 PEG3Q9GZU2 1588 aa42.8■■■■■ 4.44
PRICKLE4-201ENST00000394259 BAZ1BQ9UIG0 1483 aaKnown RBP42.67■■■■■ 4.42
PRICKLE4-201ENST00000394259 WIZO95785 1651 aa42.38■■■■■ 4.37
PRICKLE4-201ENST00000394259 NESP48681 1621 aa42.27■■■■■ 4.36
PRICKLE4-201ENST00000394259 ERCC6Q03468 1493 aa42.2■■■■■ 4.35
PRICKLE4-201ENST00000394259 RSF1Q96T23 1441 aaPredicted RBP42.11■■■■■ 4.33
PRICKLE4-201ENST00000394259 LAMC3Q9Y6N6 1575 aa42.07■■■■■ 4.33
PRICKLE4-201ENST00000394259 CUX2O14529 1486 aa41.95■■■■■ 4.31
PRICKLE4-201ENST00000394259 KIF21AQ7Z4S6 1674 aa41.84■■■■■ 4.29
PRICKLE4-201ENST00000394259 TOP2AP11388 1531 aaKnown RBP41.83■■■■■ 4.29
PRICKLE4-201ENST00000394259 CADPSQ9ULU8 1353 aa41.8■■■■■ 4.28
PRICKLE4-201ENST00000394259 THOC2Q8NI27 1593 aaKnown RBP41.76■■■■■ 4.27
PRICKLE4-201ENST00000394259 PDS5BQ9NTI5 1447 aa41.74■■■■■ 4.27
PRICKLE4-201ENST00000394259 CFTRP13569 1480 aa41.47■■■■■ 4.23
PRICKLE4-201ENST00000394259 MRC2Q9UBG0 1479 aa41.38■■■■■ 4.21
PRICKLE4-201ENST00000394259 FANCD2Q9BXW9 1451 aa41.34■■■■■ 4.21
PRICKLE4-201ENST00000394259 CCDC88BA6NC98 1476 aa41.34■■■■■ 4.21
PRICKLE4-201ENST00000394259 CEP164Q9UPV0 1460 aa41.34■■■■■ 4.21
PRICKLE4-201ENST00000394259 PRDM2Q13029 1718 aa41.3■■■■■ 4.2
PRICKLE4-201ENST00000394259 WDR62O43379 1518 aa41.28■■■■■ 4.2
PRICKLE4-201ENST00000394259 DNAJC5Q9H3Z4 198 aa41.22■■■■■ 4.19
PRICKLE4-201ENST00000394259 URB2Q14146 1524 aaKnown RBP41■■■■■ 4.15
PRICKLE4-201ENST00000394259 TOPBP1Q92547 1522 aa40.66■■■■■ 4.1
PRICKLE4-201ENST00000394259 SUPT5HO00267 1087 aaKnown RBP40.65■■■■■ 4.1
PRICKLE4-201ENST00000394259 ABCC8Q09428 1581 aa40.58■■■■■ 4.09
PRICKLE4-201ENST00000394259 DNMBPQ6XZF7 1577 aa40.57■■■■■ 4.09
PRICKLE4-201ENST00000394259 IFT140Q96RY7 1462 aa40.48■■■■■ 4.07
PRICKLE4-201ENST00000394259 ZNF608Q9ULD9 1512 aaPredicted RBP40.39■■■■■ 4.06
PRICKLE4-201ENST00000394259 TARBP1Q13395 1621 aaKnown RBP40.3■■■■■ 4.04
PRICKLE4-201ENST00000394259 POLA1P09884 1462 aaPredicted RBP40.26■■■■■ 4.04
PRICKLE4-201ENST00000394259 EIF4G3O43432 1585 aaKnown RBP40.23■■■■■ 4.03
PRICKLE4-201ENST00000394259 CUX1P39880 1505 aa40.19■■■■■ 4.02
PRICKLE4-201ENST00000394259 FGD5Q6ZNL6 1462 aa40.11■■■■■ 4.01
PRICKLE4-201ENST00000394259 RAD54L2Q9Y4B4 1467 aa40.11■■■■■ 4.01
PRICKLE4-201ENST00000394259 OSCARQ8IYS5 282 aa40.09■■■■■ 4.01
PRICKLE4-201ENST00000394259 AQRO60306 1485 aaKnown RBP eCLIP40.07■■■■■ 4.01
PRICKLE4-201ENST00000394259 SOGA1O94964 1423 aa40.07■■■■■ 4
PRICKLE4-201ENST00000394259 WDR97A6NE52 1622 aa39.91■■■■□ 3.98
PRICKLE4-201ENST00000394259 TDRD9Q8NDG6 1382 aaKnown RBP39.9■■■■□ 3.98
PRICKLE4-201ENST00000394259 CHD1O14646 1710 aa39.9■■■■□ 3.98
PRICKLE4-201ENST00000394259 BIVM-ERCC5R4GMW8 1640 aa39.76■■■■□ 3.95
PRICKLE4-201ENST00000394259 TOP2BQ02880 1626 aa39.73■■■■□ 3.95
PRICKLE4-201ENST00000394259 SYNJ1O43426 1573 aa39.71■■■■□ 3.95
PRICKLE4-201ENST00000394259 SNAPC4Q5SXM2 1469 aa39.69■■■■□ 3.94
PRICKLE4-201ENST00000394259 WRNQ14191 1432 aaPredicted RBP eCLIP39.69■■■■□ 3.94
PRICKLE4-201ENST00000394259 ABCA10Q8WWZ4 1543 aa39.69■■■■□ 3.94
PRICKLE4-201ENST00000394259 PBRM1Q86U86 1689 aa39.68■■■■□ 3.94
PRICKLE4-201ENST00000394259 GRIN2BQ13224 1484 aa39.66■■■■□ 3.94
PRICKLE4-201ENST00000394259 TRIM41Q8WV44 630 aa39.64■■■■□ 3.94
PRICKLE4-201ENST00000394259 FBLN2P98095 1184 aa39.63■■■■□ 3.93
PRICKLE4-201ENST00000394259 RIMBP3CA6NJZ7 1639 aa39.62■■■■□ 3.93
PRICKLE4-201ENST00000394259 RIMBP3BA6NNM3 1639 aa39.62■■■■□ 3.93
PRICKLE4-201ENST00000394259 ABCA5Q8WWZ7 1642 aa39.62■■■■□ 3.93
PRICKLE4-201ENST00000394259 RIMBP3Q9UFD9 1639 aa39.62■■■■□ 3.93
PRICKLE4-201ENST00000394259 GAPVD1Q14C86 1478 aa39.62■■■■□ 3.93
PRICKLE4-201ENST00000394259 MAGI1Q96QZ7 1491 aaPredicted RBP39.62■■■■□ 3.93
PRICKLE4-201ENST00000394259 ARHGEF11O15085 1522 aa39.5■■■■□ 3.91
PRICKLE4-201ENST00000394259 SYNJ2O15056 1496 aa39.46■■■■□ 3.91
PRICKLE4-201ENST00000394259 CHMP7Q8WUX9 453 aaPredicted RBP39.45■■■■□ 3.91
PRICKLE4-201ENST00000394259 CLASP1Q7Z460 1538 aa39.37■■■■□ 3.89
PRICKLE4-201ENST00000394259 ADAMTS12P58397 1594 aa39.26■■■■□ 3.88
PRICKLE4-201ENST00000394259 ERICH3Q5RHP9 1530 aa39.21■■■■□ 3.87
PRICKLE4-201ENST00000394259 ARAP1Q96P48 1450 aa39.17■■■■□ 3.86
PRICKLE4-201ENST00000394259 GRIN2AQ12879 1464 aa39.16■■■■□ 3.86
PRICKLE4-201ENST00000394259 CYB5RLQ6IPT4 315 aa39.12■■■■□ 3.85
PRICKLE4-201ENST00000394259 FHAD1B1AJZ9 1412 aa39.12■■■■□ 3.85
PRICKLE4-201ENST00000394259 CEP170Q5SW79 1584 aa39.04■■■■□ 3.84
PRICKLE4-201ENST00000394259 NUP160Q12769 1436 aa39.01■■■■□ 3.84
PRICKLE4-201ENST00000394259 KIF27Q86VH2 1401 aa38.89■■■■□ 3.82
PRICKLE4-201ENST00000394259 SHROOM2Q13796 1616 aa38.84■■■■□ 3.81
PRICKLE4-201ENST00000394259 IGF1RP08069 1367 aa38.82■■■■□ 3.8
PRICKLE4-201ENST00000394259 ERCC6L2Q5T890 1561 aa38.81■■■■□ 3.8
PRICKLE4-201ENST00000394259 CUL7Q14999 1698 aa38.8■■■■□ 3.8
PRICKLE4-201ENST00000394259 RUSC2Q8N2Y8 1516 aa38.69■■■■□ 3.78
PRICKLE4-201ENST00000394259 JPH4Q96JJ6 628 aa38.58■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms