Protein–RNA interactions for Protein: Q96PU5

NEDD4L, E3 ubiquitin-protein ligase NEDD4-like, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4LQ96PU5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4LQ96PU5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NEDD4LQ96PU5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 DUX4L13-201ENST00000554103 1267 ntBASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 DUX4L15-201ENST00000611059 1267 ntBASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 DUX4L23-201ENST00000615195 1269 ntBASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 DUX4L24-201ENST00000617576 1269 ntBASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 DUX4L22-201ENST00000618238 1269 ntBASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 DUX4L20-201ENST00000619712 1269 ntBASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 DUX4L21-201ENST00000622058 1269 ntBASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 DUX4L10-201ENST00000622460 1267 ntBASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 DUX4L25-201ENST00000624915 1269 ntBASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NEDD4LQ96PU5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEDD4LQ96PU5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.58■□□□□ 0.89
NEDD4LQ96PU5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEDD4LQ96PU5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.58■□□□□ 0.89
NEDD4LQ96PU5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEDD4LQ96PU5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEDD4LQ96PU5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
NEDD4LQ96PU5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEDD4LQ96PU5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEDD4LQ96PU5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEDD4LQ96PU5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
NEDD4LQ96PU5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4LQ96PU5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4LQ96PU5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4LQ96PU5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4LQ96PU5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.57■□□□□ 0.88
NEDD4LQ96PU5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NEDD4LQ96PU5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4LQ96PU5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4LQ96PU5 ABCB10P4-201ENST00000566803 2184 ntBASIC20.56■□□□□ 0.88
NEDD4LQ96PU5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
NEDD4LQ96PU5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4LQ96PU5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NEDD4LQ96PU5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4LQ96PU5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NEDD4LQ96PU5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4LQ96PU5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4LQ96PU5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.55■□□□□ 0.88
NEDD4LQ96PU5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
NEDD4LQ96PU5 MIR219A2-201ENST00000608502 1504 ntBASIC20.55■□□□□ 0.88
NEDD4LQ96PU5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.55■□□□□ 0.88
NEDD4LQ96PU5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4LQ96PU5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4LQ96PU5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4LQ96PU5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.54■□□□□ 0.88
NEDD4LQ96PU5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4LQ96PU5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.54■□□□□ 0.88
NEDD4LQ96PU5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4LQ96PU5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NEDD4LQ96PU5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4LQ96PU5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4LQ96PU5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.53■□□□□ 0.88
NEDD4LQ96PU5 AC148477.6-201ENST00000623746 465 ntBASIC20.53■□□□□ 0.88
NEDD4LQ96PU5 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.53■□□□□ 0.88
NEDD4LQ96PU5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4LQ96PU5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEDD4LQ96PU5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4LQ96PU5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4LQ96PU5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4LQ96PU5 RPS2P35-201ENST00000443417 897 ntBASIC20.52■□□□□ 0.88
NEDD4LQ96PU5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4LQ96PU5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NEDD4LQ96PU5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NEDD4LQ96PU5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.52■□□□□ 0.88
NEDD4LQ96PU5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEDD4LQ96PU5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4LQ96PU5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
NEDD4LQ96PU5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NEDD4LQ96PU5 DUX4L11-201ENST00000611504 1267 ntBASIC20.51■□□□□ 0.87
NEDD4LQ96PU5 DUX4L12-201ENST00000614593 1267 ntBASIC20.51■□□□□ 0.87
NEDD4LQ96PU5 DUX4L14-201ENST00000621227 1267 ntBASIC20.51■□□□□ 0.87
NEDD4LQ96PU5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4LQ96PU5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEDD4LQ96PU5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.5■□□□□ 0.87
NEDD4LQ96PU5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NEDD4LQ96PU5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEDD4LQ96PU5 AC004812.2-201ENST00000611079 2094 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms