RNA–Protein interactions for RNA: ENST00000409012.4

TPRN-202, Transcript of taperin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPRN, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-202ENST00000409012 NISCHQ9Y2I1 1504 aa46.73■■■■■ 5.07
TPRN-202ENST00000409012 CCDC180Q9P1Z9 1646 aa40.72■■■■■ 4.11
TPRN-202ENST00000409012 SHROOM4Q9ULL8 1493 aa39.51■■■■□ 3.92
TPRN-202ENST00000409012 ZCCHC6Q5VYS8 1495 aaKnown RBP39.39■■■■□ 3.9
TPRN-202ENST00000409012 ABCC9O60706 1549 aa39.33■■■■□ 3.89
TPRN-202ENST00000409012 DCAF8L2P0C7V8 631 aa39.22■■■■□ 3.87
TPRN-202ENST00000409012 SUPT5HO00267 1087 aaKnown RBP38.55■■■■□ 3.76
TPRN-202ENST00000409012 DCAF1Q9Y4B6 1507 aa38.36■■■■□ 3.73
TPRN-202ENST00000409012 NACADO15069 1562 aa38.05■■■■□ 3.68
TPRN-202ENST00000409012 MYO15BQ96JP2 1530 aa37.98■■■■□ 3.67
TPRN-202ENST00000409012 RB1CC1Q8TDY2 1594 aa37.88■■■■□ 3.66
TPRN-202ENST00000409012 SCRIBQ14160 1630 aa37.81■■■■□ 3.64
TPRN-202ENST00000409012 UNC13AQ9UPW8 1703 aa37.31■■■■□ 3.56
TPRN-202ENST00000409012 CHIC1Q5VXU3 224 aa37.27■■■■□ 3.56
TPRN-202ENST00000409012 PABPN1Q86U42 306 aaKnown RBP eCLIP37.15■■■■□ 3.54
TPRN-202ENST00000409012 BICRAQ9NZM4 1560 aa36.9■■■■□ 3.5
TPRN-202ENST00000409012 RSF1Q96T23 1441 aaPredicted RBP36.77■■■■□ 3.48
TPRN-202ENST00000409012 CECR2Q9BXF3 1484 aa36.58■■■■□ 3.45
TPRN-202ENST00000409012 MROH2BQ7Z745 1585 aa36.27■■■■□ 3.4
TPRN-202ENST00000409012 LOC105371045A0A1W2PR82 267 aa36.17■■■■□ 3.38
TPRN-202ENST00000409012 WIZO95785 1651 aa36.06■■■■□ 3.36
TPRN-202ENST00000409012 BAZ1AQ9NRL2 1556 aaPredicted RBP36.05■■■■□ 3.36
TPRN-202ENST00000409012 SMARCA4P51532 1647 aa36.02■■■■□ 3.36
TPRN-202ENST00000409012 TRIM41Q8WV44 630 aa35.92■■■■□ 3.34
TPRN-202ENST00000409012 PCGF6Q9BYE7 350 aa35.83■■■■□ 3.33
TPRN-202ENST00000409012 EIF4G1Q04637 1599 aaKnown RBP35.81■■■■□ 3.32
TPRN-202ENST00000409012 HRCP23327 699 aa35.64■■■■□ 3.3
TPRN-202ENST00000409012 FAM9AQ8IZU1 332 aaPredicted RBP35.64■■■■□ 3.3
TPRN-202ENST00000409012 ATAD2BQ9ULI0 1458 aa35.54■■■■□ 3.28
TPRN-202ENST00000409012 TOP2AP11388 1531 aaKnown RBP35.46■■■■□ 3.27
TPRN-202ENST00000409012 CC2D2AQ9P2K1 1620 aa35.43■■■■□ 3.26
TPRN-202ENST00000409012 PEG3Q9GZU2 1588 aa35.42■■■■□ 3.26
TPRN-202ENST00000409012 SMARCA2P51531 1590 aa35.37■■■■□ 3.25
TPRN-202ENST00000409012 EHMT2Q96KQ7 1210 aa35.37■■■■□ 3.25
TPRN-202ENST00000409012 BAZ1BQ9UIG0 1483 aaKnown RBP35.34■■■■□ 3.25
TPRN-202ENST00000409012 CCDC88BA6NC98 1476 aa35.32■■■■□ 3.24
TPRN-202ENST00000409012 NCAPD3P42695 1498 aa35.18■■■■□ 3.22
TPRN-202ENST00000409012 DNAJC5BQ9UF47 199 aa35.18■■■■□ 3.22
TPRN-202ENST00000409012 TRIM26Q12899 539 aaPredicted RBP35.17■■■■□ 3.22
TPRN-202ENST00000409012 ABCC8Q09428 1581 aa35.12■■■■□ 3.21
TPRN-202ENST00000409012 HMGXB3Q12766 1538 aa35.05■■■■□ 3.2
TPRN-202ENST00000409012 PPARGC1BQ86YN6 1023 aaKnown RBP34.96■■■■□ 3.19
TPRN-202ENST00000409012 SOGA1O94964 1423 aa34.7■■■■□ 3.15
TPRN-202ENST00000409012 RUSC2Q8N2Y8 1516 aa34.56■■■■□ 3.12
TPRN-202ENST00000409012 WRNQ14191 1432 aaPredicted RBP eCLIP34.55■■■■□ 3.121e-7■■■■■ 66.8
TPRN-202ENST00000409012 NESP48681 1621 aa34.44■■■■□ 3.1
TPRN-202ENST00000409012 CSRNP3Q8WYN3 585 aa34.44■■■■□ 3.1
TPRN-202ENST00000409012 SYNJ1O43426 1573 aa34.41■■■■□ 3.1
TPRN-202ENST00000409012 EEA1Q15075 1411 aa34.39■■■■□ 3.1
TPRN-202ENST00000409012 CFTRP13569 1480 aa34.35■■■■□ 3.09
TPRN-202ENST00000409012 CADPSQ9ULU8 1353 aa34.35■■■■□ 3.09
TPRN-202ENST00000409012 CEP162Q5TB80 1403 aa34.33■■■■□ 3.09
TPRN-202ENST00000409012 ZEB1P37275 1124 aaPredicted RBP34.32■■■■□ 3.08
TPRN-202ENST00000409012 TNIKQ9UKE5 1360 aa34.28■■■■□ 3.08
TPRN-202ENST00000409012 UBTFP17480 764 aaKnown RBP34.28■■■■□ 3.08
TPRN-202ENST00000409012 PELP1Q8IZL8 1130 aaKnown RBP34.2■■■■□ 3.07
TPRN-202ENST00000409012 GOLGA3Q08378 1498 aa34.17■■■■□ 3.06
TPRN-202ENST00000409012 TTBK1Q5TCY1 1321 aaPredicted RBP34.12■■■■□ 3.05
TPRN-202ENST00000409012 PRDM2Q13029 1718 aa34.06■■■■□ 3.04
TPRN-202ENST00000409012 LAMC3Q9Y6N6 1575 aa34.03■■■■□ 3.04
TPRN-202ENST00000409012 FANCD2Q9BXW9 1451 aa34.03■■■■□ 3.04
TPRN-202ENST00000409012 CEP164Q9UPV0 1460 aa34.02■■■■□ 3.04
TPRN-202ENST00000409012 TOP2BQ02880 1626 aa34■■■■□ 3.03
TPRN-202ENST00000409012 KIF21BO75037 1637 aa33.97■■■■□ 3.03
TPRN-202ENST00000409012 KIF21AQ7Z4S6 1674 aa33.89■■■■□ 3.02
TPRN-202ENST00000409012 BIVM-ERCC5R4GMW8 1640 aa33.88■■■■□ 3.01
TPRN-202ENST00000409012 CUX1P39880 1505 aa33.88■■■■□ 3.01
TPRN-202ENST00000409012 RAPGEF2Q9Y4G8 1499 aa33.87■■■■□ 3.01
TPRN-202ENST00000409012 PDS5BQ9NTI5 1447 aa33.83■■■■□ 3.01
TPRN-202ENST00000409012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.83■■■■□ 3.01
TPRN-202ENST00000409012 CLIP1P30622 1438 aa33.78■■■■□ 3
TPRN-202ENST00000409012 CCER1Q8TC90 406 aaPredicted RBP33.76■■■□□ 2.99
TPRN-202ENST00000409012 RANGAP1P46060 587 aaPredicted RBP33.75■■■□□ 2.99
TPRN-202ENST00000409012 URB2Q14146 1524 aaKnown RBP33.67■■■□□ 2.98
TPRN-202ENST00000409012 ERCC6Q03468 1493 aa33.65■■■□□ 2.98
TPRN-202ENST00000409012 TOPBP1Q92547 1522 aa33.61■■■□□ 2.97
TPRN-202ENST00000409012 FGD5Q6ZNL6 1462 aa33.57■■■□□ 2.96
TPRN-202ENST00000409012 VPS8Q8N3P4 1428 aa33.57■■■□□ 2.96
TPRN-202ENST00000409012 PRXQ9BXM0 1461 aa33.57■■■□□ 2.96
TPRN-202ENST00000409012 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
TPRN-202ENST00000409012 KIF27Q86VH2 1401 aa33.51■■■□□ 2.95
TPRN-202ENST00000409012 ERICH3Q5RHP9 1530 aa33.49■■■□□ 2.95
TPRN-202ENST00000409012 RAD54L2Q9Y4B4 1467 aa33.48■■■□□ 2.95
TPRN-202ENST00000409012 POLA1P09884 1462 aaPredicted RBP33.45■■■□□ 2.95
TPRN-202ENST00000409012 MRC2Q9UBG0 1479 aa33.45■■■□□ 2.95
TPRN-202ENST00000409012 SCAF1Q9H7N4 1312 aaKnown RBP33.45■■■□□ 2.95
TPRN-202ENST00000409012 APLP2Q06481 763 aa33.39■■■□□ 2.94
TPRN-202ENST00000409012 THOC2Q8NI27 1593 aaKnown RBP33.32■■■□□ 2.93
TPRN-202ENST00000409012 CUX2O14529 1486 aa33.31■■■□□ 2.92
TPRN-202ENST00000409012 ARAP1Q96P48 1450 aa33.29■■■□□ 2.92
TPRN-202ENST00000409012 HNRNPUL2Q1KMD3 747 aaKnown RBP33.29■■■□□ 2.92
TPRN-202ENST00000409012 WDR62O43379 1518 aa33.26■■■□□ 2.92
TPRN-202ENST00000409012 TDRD9Q8NDG6 1382 aaKnown RBP33.2■■■□□ 2.91
TPRN-202ENST00000409012 IGF1RP08069 1367 aa33.19■■■□□ 2.9
TPRN-202ENST00000409012 ABCA10Q8WWZ4 1543 aa33.12■■■□□ 2.89
TPRN-202ENST00000409012 TARBP1Q13395 1621 aaKnown RBP33.1■■■□□ 2.89
TPRN-202ENST00000409012 KANK4Q5T7N3 995 aaPredicted RBP33.08■■■□□ 2.89
TPRN-202ENST00000409012 ARHGAP35Q9NRY4 1499 aa33.08■■■□□ 2.89
TPRN-202ENST00000409012 ZNF608Q9ULD9 1512 aaPredicted RBP33.06■■■□□ 2.88
TPRN-202ENST00000409012 WDR97A6NE52 1622 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms