RNA–Protein interactions for RNA: ENST00000258080.7

HTRA2-201, Transcript of HtrA serine peptidase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTRA2, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2-201ENST00000258080 NISCHQ9Y2I1 1504 aa47.78■■■■■ 5.24
HTRA2-201ENST00000258080 CCDC180Q9P1Z9 1646 aa41.06■■■■■ 4.16
HTRA2-201ENST00000258080 ZCCHC6Q5VYS8 1495 aaKnown RBP40.28■■■■■ 4.04
HTRA2-201ENST00000258080 SHROOM4Q9ULL8 1493 aa40.11■■■■■ 4.01
HTRA2-201ENST00000258080 DCAF8L2P0C7V8 631 aa39.73■■■■□ 3.95
HTRA2-201ENST00000258080 DCAF1Q9Y4B6 1507 aa39.24■■■■□ 3.87
HTRA2-201ENST00000258080 SUPT5HO00267 1087 aaKnown RBP38.95■■■■□ 3.83
HTRA2-201ENST00000258080 ABCC9O60706 1549 aa38.59■■■■□ 3.77
HTRA2-201ENST00000258080 MYO15BQ96JP2 1530 aa38.38■■■■□ 3.74
HTRA2-201ENST00000258080 SCRIBQ14160 1630 aa38.31■■■■□ 3.72
HTRA2-201ENST00000258080 NACADO15069 1562 aa38.1■■■■□ 3.69
HTRA2-201ENST00000258080 RB1CC1Q8TDY2 1594 aa37.65■■■■□ 3.62
HTRA2-201ENST00000258080 CHIC1Q5VXU3 224 aa37.5■■■■□ 3.59
HTRA2-201ENST00000258080 RSF1Q96T23 1441 aaPredicted RBP37.48■■■■□ 3.59
HTRA2-201ENST00000258080 CECR2Q9BXF3 1484 aa37.28■■■■□ 3.56
HTRA2-201ENST00000258080 MROH2BQ7Z745 1585 aa37.1■■■■□ 3.53
HTRA2-201ENST00000258080 UNC13AQ9UPW8 1703 aa37.09■■■■□ 3.53
HTRA2-201ENST00000258080 WIZO95785 1651 aa36.88■■■■□ 3.49
HTRA2-201ENST00000258080 BAZ1AQ9NRL2 1556 aaPredicted RBP36.78■■■■□ 3.48
HTRA2-201ENST00000258080 PABPN1Q86U42 306 aaKnown RBP eCLIP36.69■■■■□ 3.46
HTRA2-201ENST00000258080 BICRAQ9NZM4 1560 aa36.62■■■■□ 3.45
HTRA2-201ENST00000258080 SMARCA4P51532 1647 aa36.58■■■■□ 3.45
HTRA2-201ENST00000258080 TRIM41Q8WV44 630 aa36.35■■■■□ 3.41
HTRA2-201ENST00000258080 LOC105371045A0A1W2PR82 267 aa36.34■■■■□ 3.41
HTRA2-201ENST00000258080 TOP2AP11388 1531 aaKnown RBP36.32■■■■□ 3.4
HTRA2-201ENST00000258080 CCDC88BA6NC98 1476 aa36.09■■■■□ 3.37
HTRA2-201ENST00000258080 SMARCA2P51531 1590 aa36.08■■■■□ 3.37
HTRA2-201ENST00000258080 EIF4G1Q04637 1599 aaKnown RBP36.07■■■■□ 3.36
HTRA2-201ENST00000258080 FAM9AQ8IZU1 332 aaPredicted RBP36.02■■■■□ 3.36
HTRA2-201ENST00000258080 PEG3Q9GZU2 1588 aa35.91■■■■□ 3.34
HTRA2-201ENST00000258080 ATAD2BQ9ULI0 1458 aa35.78■■■■□ 3.32
HTRA2-201ENST00000258080 ABCC8Q09428 1581 aa35.77■■■■□ 3.32
HTRA2-201ENST00000258080 EHMT2Q96KQ7 1210 aa35.72■■■■□ 3.31
HTRA2-201ENST00000258080 BAZ1BQ9UIG0 1483 aaKnown RBP35.67■■■■□ 3.3
HTRA2-201ENST00000258080 PCGF6Q9BYE7 350 aa35.54■■■■□ 3.28
HTRA2-201ENST00000258080 HRCP23327 699 aa35.39■■■■□ 3.26
HTRA2-201ENST00000258080 WRNQ14191 1432 aaPredicted RBP eCLIP35.25■■■■□ 3.23
HTRA2-201ENST00000258080 SOGA1O94964 1423 aa35.24■■■■□ 3.23
HTRA2-201ENST00000258080 NCAPD3P42695 1498 aa35.21■■■■□ 3.23
HTRA2-201ENST00000258080 HMGXB3Q12766 1538 aa35.2■■■■□ 3.23
HTRA2-201ENST00000258080 SYNJ1O43426 1573 aa35.14■■■■□ 3.22
HTRA2-201ENST00000258080 RUSC2Q8N2Y8 1516 aa35.11■■■■□ 3.21
HTRA2-201ENST00000258080 TRIM26Q12899 539 aaPredicted RBP35.06■■■■□ 3.2
HTRA2-201ENST00000258080 EEA1Q15075 1411 aa34.96■■■■□ 3.19
HTRA2-201ENST00000258080 CSRNP3Q8WYN3 585 aa34.95■■■■□ 3.19
HTRA2-201ENST00000258080 CC2D2AQ9P2K1 1620 aa34.78■■■■□ 3.16
HTRA2-201ENST00000258080 TOP2BQ02880 1626 aa34.78■■■■□ 3.16
HTRA2-201ENST00000258080 PPARGC1BQ86YN6 1023 aaKnown RBP34.76■■■■□ 3.16
HTRA2-201ENST00000258080 UBTFP17480 764 aaKnown RBP34.75■■■■□ 3.15
HTRA2-201ENST00000258080 CEP162Q5TB80 1403 aa34.74■■■■□ 3.15
HTRA2-201ENST00000258080 CFTRP13569 1480 aa34.72■■■■□ 3.15
HTRA2-201ENST00000258080 TNIKQ9UKE5 1360 aa34.72■■■■□ 3.15
HTRA2-201ENST00000258080 GOLGA3Q08378 1498 aa34.7■■■■□ 3.15
HTRA2-201ENST00000258080 BIVM-ERCC5R4GMW8 1640 aa34.68■■■■□ 3.14
HTRA2-201ENST00000258080 CUX1P39880 1505 aa34.6■■■■□ 3.13
HTRA2-201ENST00000258080 CEP164Q9UPV0 1460 aa34.59■■■■□ 3.13
HTRA2-201ENST00000258080 KIF21BO75037 1637 aa34.56■■■■□ 3.12
HTRA2-201ENST00000258080 PRDM2Q13029 1718 aa34.51■■■■□ 3.11
HTRA2-201ENST00000258080 CADPSQ9ULU8 1353 aa34.48■■■■□ 3.11
HTRA2-201ENST00000258080 RAPGEF2Q9Y4G8 1499 aa34.44■■■■□ 3.1
HTRA2-201ENST00000258080 TTBK1Q5TCY1 1321 aaPredicted RBP34.38■■■■□ 3.09
HTRA2-201ENST00000258080 PELP1Q8IZL8 1130 aaKnown RBP34.29■■■■□ 3.08
HTRA2-201ENST00000258080 CLIP1P30622 1438 aa34.26■■■■□ 3.08
HTRA2-201ENST00000258080 RANGAP1P46060 587 aaPredicted RBP34.26■■■■□ 3.07
HTRA2-201ENST00000258080 KIF27Q86VH2 1401 aa34.23■■■■□ 3.07
HTRA2-201ENST00000258080 PRXQ9BXM0 1461 aa34.19■■■■□ 3.06
HTRA2-201ENST00000258080 FANCD2Q9BXW9 1451 aa34.17■■■■□ 3.06
HTRA2-201ENST00000258080 NESP48681 1621 aa34.16■■■■□ 3.06
HTRA2-201ENST00000258080 ERICH3Q5RHP9 1530 aa34.14■■■■□ 3.06
HTRA2-201ENST00000258080 FGD5Q6ZNL6 1462 aa34.1■■■■□ 3.05
HTRA2-201ENST00000258080 CUX2O14529 1486 aa34.08■■■■□ 3.05
HTRA2-201ENST00000258080 DNAJC5BQ9UF47 199 aa34.01■■■■□ 3.04
HTRA2-201ENST00000258080 VPS8Q8N3P4 1428 aa34.01■■■■□ 3.04
HTRA2-201ENST00000258080 ZEB1P37275 1124 aaPredicted RBP33.93■■■■□ 3.02
HTRA2-201ENST00000258080 DNMBPQ6XZF7 1577 aa33.91■■■■□ 3.02
HTRA2-201ENST00000258080 IGF1RP08069 1367 aa33.9■■■■□ 3.02
HTRA2-201ENST00000258080 LAMC3Q9Y6N6 1575 aa33.88■■■■□ 3.01
HTRA2-201ENST00000258080 TOPBP1Q92547 1522 aa33.87■■■■□ 3.01
HTRA2-201ENST00000258080 RAD54L2Q9Y4B4 1467 aa33.83■■■■□ 3.01
HTRA2-201ENST00000258080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.83■■■■□ 3.01
HTRA2-201ENST00000258080 ARAP1Q96P48 1450 aa33.82■■■■□ 3
HTRA2-201ENST00000258080 APLP2Q06481 763 aa33.8■■■■□ 3
HTRA2-201ENST00000258080 POLA1P09884 1462 aaPredicted RBP33.8■■■■□ 3
HTRA2-201ENST00000258080 CARMIL1Q5VZK9 1371 aa33.76■■■□□ 2.99
HTRA2-201ENST00000258080 URB2Q14146 1524 aaKnown RBP33.72■■■□□ 2.99
HTRA2-201ENST00000258080 CCER1Q8TC90 406 aaPredicted RBP33.7■■■□□ 2.98
HTRA2-201ENST00000258080 ABCA10Q8WWZ4 1543 aa33.69■■■□□ 2.98
HTRA2-201ENST00000258080 PDS5BQ9NTI5 1447 aa33.65■■■□□ 2.98
HTRA2-201ENST00000258080 ARHGAP35Q9NRY4 1499 aa33.65■■■□□ 2.98
HTRA2-201ENST00000258080 KIF21AQ7Z4S6 1674 aa33.62■■■□□ 2.97
HTRA2-201ENST00000258080 HNRNPUL2Q1KMD3 747 aaKnown RBP33.51■■■□□ 2.95
HTRA2-201ENST00000258080 WDR97A6NE52 1622 aa33.5■■■□□ 2.95
HTRA2-201ENST00000258080 KANK4Q5T7N3 995 aaPredicted RBP33.47■■■□□ 2.95
HTRA2-201ENST00000258080 TDRD9Q8NDG6 1382 aaKnown RBP33.45■■■□□ 2.94
HTRA2-201ENST00000258080 CUL7Q14999 1698 aa33.41■■■□□ 2.94
HTRA2-201ENST00000258080 ABCA5Q8WWZ7 1642 aa33.36■■■□□ 2.93
HTRA2-201ENST00000258080 SCAF1Q9H7N4 1312 aaKnown RBP33.35■■■□□ 2.93
HTRA2-201ENST00000258080 P3H3Q8IVL6 736 aa33.34■■■□□ 2.93
HTRA2-201ENST00000258080 GAPVD1Q14C86 1478 aa33.32■■■□□ 2.92
HTRA2-201ENST00000258080 CTTNBP2Q8WZ74 1663 aa33.25■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms