RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 NISCHQ9Y2I1 1504 aa53■■■■■ 6.08
SNCB-201ENST00000310112 CCDC180Q9P1Z9 1646 aa46.23■■■■■ 4.99
SNCB-201ENST00000310112 ZCCHC6Q5VYS8 1495 aaKnown RBP44.58■■■■■ 4.73
SNCB-201ENST00000310112 DCAF1Q9Y4B6 1507 aa43.99■■■■■ 4.63
SNCB-201ENST00000310112 DCAF8L2P0C7V8 631 aa43.45■■■■■ 4.55
SNCB-201ENST00000310112 MYO15BQ96JP2 1530 aa43.42■■■■■ 4.54
SNCB-201ENST00000310112 ABCC9O60706 1549 aa43.24■■■■■ 4.51
SNCB-201ENST00000310112 SHROOM4Q9ULL8 1493 aa43.11■■■■■ 4.49
SNCB-201ENST00000310112 NACADO15069 1562 aa42.99■■■■■ 4.47
SNCB-201ENST00000310112 RB1CC1Q8TDY2 1594 aa42.53■■■■■ 4.4
SNCB-201ENST00000310112 SCRIBQ14160 1630 aa42.3■■■■■ 4.36
SNCB-201ENST00000310112 SUPT5HO00267 1087 aaKnown RBP41.65■■■■■ 4.26
SNCB-201ENST00000310112 UNC13AQ9UPW8 1703 aa41.54■■■■■ 4.24
SNCB-201ENST00000310112 RSF1Q96T23 1441 aaPredicted RBP41.16■■■■■ 4.18
SNCB-201ENST00000310112 BICRAQ9NZM4 1560 aa41.13■■■■■ 4.17
SNCB-201ENST00000310112 CECR2Q9BXF3 1484 aa41.01■■■■■ 4.16
SNCB-201ENST00000310112 BAZ1AQ9NRL2 1556 aaPredicted RBP40.96■■■■■ 4.15
SNCB-201ENST00000310112 MROH2BQ7Z745 1585 aa40.87■■■■■ 4.13
SNCB-201ENST00000310112 PABPN1Q86U42 306 aaKnown RBP eCLIP40.75■■■■■ 4.11
SNCB-201ENST00000310112 SMARCA4P51532 1647 aa40.68■■■■■ 4.1
SNCB-201ENST00000310112 WIZO95785 1651 aa40.52■■■■■ 4.08
SNCB-201ENST00000310112 PEG3Q9GZU2 1588 aa40.27■■■■■ 4.04
SNCB-201ENST00000310112 TOP2AP11388 1531 aaKnown RBP40.24■■■■■ 4.03
SNCB-201ENST00000310112 CHIC1Q5VXU3 224 aa40.1■■■■■ 4.01
SNCB-201ENST00000310112 SMARCA2P51531 1590 aa40.03■■■■■ 4
SNCB-201ENST00000310112 ATAD2BQ9ULI0 1458 aa39.96■■■■□ 3.99
SNCB-201ENST00000310112 EIF4G1Q04637 1599 aaKnown RBP39.9■■■■□ 3.98
SNCB-201ENST00000310112 CCDC88BA6NC98 1476 aa39.75■■■■□ 3.95
SNCB-201ENST00000310112 BAZ1BQ9UIG0 1483 aaKnown RBP39.75■■■■□ 3.95
SNCB-201ENST00000310112 NCAPD3P42695 1498 aa39.64■■■■□ 3.94
SNCB-201ENST00000310112 HMGXB3Q12766 1538 aa39.63■■■■□ 3.93
SNCB-201ENST00000310112 TRIM41Q8WV44 630 aa39.28■■■■□ 3.88
SNCB-201ENST00000310112 CC2D2AQ9P2K1 1620 aa39.22■■■■□ 3.87
SNCB-201ENST00000310112 ABCC8Q09428 1581 aa38.88■■■■□ 3.82
SNCB-201ENST00000310112 CFTRP13569 1480 aa38.79■■■■□ 3.8
SNCB-201ENST00000310112 WRNQ14191 1432 aaPredicted RBP eCLIP38.76■■■■□ 3.8
SNCB-201ENST00000310112 PRDM2Q13029 1718 aa38.66■■■■□ 3.78
SNCB-201ENST00000310112 CADPSQ9ULU8 1353 aa38.61■■■■□ 3.77
SNCB-201ENST00000310112 SYNJ1O43426 1573 aa38.51■■■■□ 3.76
SNCB-201ENST00000310112 EEA1Q15075 1411 aa38.5■■■■□ 3.75
SNCB-201ENST00000310112 TOP2BQ02880 1626 aa38.45■■■■□ 3.75
SNCB-201ENST00000310112 LOC105371045A0A1W2PR82 267 aa38.43■■■■□ 3.74
SNCB-201ENST00000310112 BIVM-ERCC5R4GMW8 1640 aa38.42■■■■□ 3.74
SNCB-201ENST00000310112 FAM9AQ8IZU1 332 aaPredicted RBP38.38■■■■□ 3.73
SNCB-201ENST00000310112 LAMC3Q9Y6N6 1575 aa38.27■■■■□ 3.72
SNCB-201ENST00000310112 SOGA1O94964 1423 aa38.23■■■■□ 3.71
SNCB-201ENST00000310112 CUX1P39880 1505 aa38.22■■■■□ 3.71
SNCB-201ENST00000310112 FANCD2Q9BXW9 1451 aa38.14■■■■□ 3.7
SNCB-201ENST00000310112 CSRNP3Q8WYN3 585 aa38.1■■■■□ 3.69
SNCB-201ENST00000310112 RUSC2Q8N2Y8 1516 aa38.02■■■■□ 3.68
SNCB-201ENST00000310112 NESP48681 1621 aa38.01■■■■□ 3.67
SNCB-201ENST00000310112 PDS5BQ9NTI5 1447 aa37.97■■■■□ 3.67
SNCB-201ENST00000310112 CEP164Q9UPV0 1460 aa37.91■■■■□ 3.66
SNCB-201ENST00000310112 DNMBPQ6XZF7 1577 aa37.9■■■■□ 3.66
SNCB-201ENST00000310112 KIF21BO75037 1637 aa37.89■■■■□ 3.66
SNCB-201ENST00000310112 DNAJC5BQ9UF47 199 aa37.88■■■■□ 3.65
SNCB-201ENST00000310112 GOLGA3Q08378 1498 aa37.86■■■■□ 3.65
SNCB-201ENST00000310112 KIF27Q86VH2 1401 aa37.81■■■■□ 3.64
SNCB-201ENST00000310112 TNIKQ9UKE5 1360 aa37.8■■■■□ 3.64
SNCB-201ENST00000310112 FGD5Q6ZNL6 1462 aa37.77■■■■□ 3.64
SNCB-201ENST00000310112 TOPBP1Q92547 1522 aa37.76■■■■□ 3.63
SNCB-201ENST00000310112 EHMT2Q96KQ7 1210 aa37.68■■■■□ 3.62
SNCB-201ENST00000310112 ERICH3Q5RHP9 1530 aa37.62■■■■□ 3.61
SNCB-201ENST00000310112 KIF21AQ7Z4S6 1674 aa37.62■■■■□ 3.61
SNCB-201ENST00000310112 URB2Q14146 1524 aaKnown RBP37.61■■■■□ 3.61
SNCB-201ENST00000310112 PRXQ9BXM0 1461 aa37.59■■■■□ 3.61
SNCB-201ENST00000310112 CUX2O14529 1486 aa37.58■■■■□ 3.61
SNCB-201ENST00000310112 POLA1P09884 1462 aaPredicted RBP37.56■■■■□ 3.6
SNCB-201ENST00000310112 UBTFP17480 764 aaKnown RBP37.55■■■■□ 3.6
SNCB-201ENST00000310112 ABCA10Q8WWZ4 1543 aa37.53■■■■□ 3.6
SNCB-201ENST00000310112 CEP162Q5TB80 1403 aa37.52■■■■□ 3.6
SNCB-201ENST00000310112 RAPGEF2Q9Y4G8 1499 aa37.47■■■■□ 3.59
SNCB-201ENST00000310112 MRC2Q9UBG0 1479 aa37.42■■■■□ 3.58
SNCB-201ENST00000310112 IGF1RP08069 1367 aa37.39■■■■□ 3.58
SNCB-201ENST00000310112 RAD54L2Q9Y4B4 1467 aa37.36■■■■□ 3.57
SNCB-201ENST00000310112 WDR97A6NE52 1622 aa37.35■■■■□ 3.57
SNCB-201ENST00000310112 CARMIL1Q5VZK9 1371 aa37.22■■■■□ 3.55
SNCB-201ENST00000310112 WDR62O43379 1518 aa37.21■■■■□ 3.55
SNCB-201ENST00000310112 CLIP1P30622 1438 aa37.2■■■■□ 3.55
SNCB-201ENST00000310112 CUL7Q14999 1698 aa37.18■■■■□ 3.54
SNCB-201ENST00000310112 TARBP1Q13395 1621 aaKnown RBP37.17■■■■□ 3.54
SNCB-201ENST00000310112 ABCA5Q8WWZ7 1642 aa37.17■■■■□ 3.54
SNCB-201ENST00000310112 ERCC6Q03468 1493 aa37.14■■■■□ 3.54
SNCB-201ENST00000310112 TRIM26Q12899 539 aaPredicted RBP37.09■■■■□ 3.53
SNCB-201ENST00000310112 GAPVD1Q14C86 1478 aa37.08■■■■□ 3.53
SNCB-201ENST00000310112 IFT140Q96RY7 1462 aa37.03■■■■□ 3.52
SNCB-201ENST00000310112 THOC2Q8NI27 1593 aaKnown RBP37■■■■□ 3.51
SNCB-201ENST00000310112 TDRD9Q8NDG6 1382 aaKnown RBP36.98■■■■□ 3.51
SNCB-201ENST00000310112 VPS8Q8N3P4 1428 aa36.95■■■■□ 3.5
SNCB-201ENST00000310112 PCGF6Q9BYE7 350 aa36.94■■■■□ 3.5
SNCB-201ENST00000310112 PBRM1Q86U86 1689 aa36.84■■■■□ 3.49
SNCB-201ENST00000310112 GRIN2BQ13224 1484 aa36.79■■■■□ 3.48
SNCB-201ENST00000310112 ARAP1Q96P48 1450 aa36.77■■■■□ 3.48
SNCB-201ENST00000310112 CTTNBP2Q8WZ74 1663 aa36.74■■■■□ 3.47
SNCB-201ENST00000310112 ARHGAP35Q9NRY4 1499 aa36.73■■■■□ 3.47
SNCB-201ENST00000310112 FHAD1B1AJZ9 1412 aa36.73■■■■□ 3.47
SNCB-201ENST00000310112 AQRO60306 1485 aaKnown RBP eCLIP36.71■■■■□ 3.47
SNCB-201ENST00000310112 ADAMTS12P58397 1594 aa36.67■■■■□ 3.46
SNCB-201ENST00000310112 RANGAP1P46060 587 aaPredicted RBP36.66■■■■□ 3.46
SNCB-201ENST00000310112 EFCAB5A4FU69 1503 aa36.64■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms