RNA–Protein interactions for RNA: ENST00000445482.2

VGF-202, Transcript of VGF nerve growth factor inducible, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VGF, Length 2,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGF-202ENST00000445482 NISCHQ9Y2I1 1504 aa44.61■■■■■ 4.73
VGF-202ENST00000445482 SHROOM4Q9ULL8 1493 aa38.06■■■■□ 3.68
VGF-202ENST00000445482 CCDC180Q9P1Z9 1646 aa37.98■■■■□ 3.67
VGF-202ENST00000445482 ZCCHC6Q5VYS8 1495 aaKnown RBP37.66■■■■□ 3.62
VGF-202ENST00000445482 DCAF8L2P0C7V8 631 aa37.31■■■■□ 3.56
VGF-202ENST00000445482 SUPT5HO00267 1087 aaKnown RBP37.21■■■■□ 3.55
VGF-202ENST00000445482 DCAF1Q9Y4B6 1507 aa36.5■■■■□ 3.43
VGF-202ENST00000445482 CHIC1Q5VXU3 224 aa35.95■■■■□ 3.35
VGF-202ENST00000445482 MYO15BQ96JP2 1530 aa35.76■■■■□ 3.31
VGF-202ENST00000445482 SCRIBQ14160 1630 aa35.71■■■■□ 3.31
VGF-202ENST00000445482 ABCC9O60706 1549 aa35.57■■■■□ 3.28
VGF-202ENST00000445482 HRCP23327 699 aa35.52■■■■□ 3.28
VGF-202ENST00000445482 RSF1Q96T23 1441 aaPredicted RBP35.23■■■■□ 3.23
VGF-202ENST00000445482 NACADO15069 1562 aa35.19■■■■□ 3.22
VGF-202ENST00000445482 PCGF6Q9BYE7 350 aa35.06■■■■□ 3.2
VGF-202ENST00000445482 LOC105371045A0A1W2PR82 267 aa34.97■■■■□ 3.19
VGF-202ENST00000445482 CECR2Q9BXF3 1484 aa34.88■■■■□ 3.18
VGF-202ENST00000445482 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
VGF-202ENST00000445482 MROH2BQ7Z745 1585 aa34.71■■■■□ 3.15
VGF-202ENST00000445482 PPARGC1BQ86YN6 1023 aaKnown RBP34.65■■■■□ 3.14
VGF-202ENST00000445482 TRIM41Q8WV44 630 aa34.61■■■■□ 3.13
VGF-202ENST00000445482 WIZO95785 1651 aa34.55■■■■□ 3.12
VGF-202ENST00000445482 FAM9AQ8IZU1 332 aaPredicted RBP34.42■■■■□ 3.1
VGF-202ENST00000445482 BAZ1AQ9NRL2 1556 aaPredicted RBP34.28■■■■□ 3.08
VGF-202ENST00000445482 PELP1Q8IZL8 1130 aaKnown RBP34.25■■■■□ 3.07
VGF-202ENST00000445482 TRIM26Q12899 539 aaPredicted RBP34.25■■■■□ 3.07
VGF-202ENST00000445482 UNC13AQ9UPW8 1703 aa34.25■■■■□ 3.07
VGF-202ENST00000445482 EHMT2Q96KQ7 1210 aa34.23■■■■□ 3.07
VGF-202ENST00000445482 SMARCA4P51532 1647 aa34.04■■■■□ 3.04
VGF-202ENST00000445482 PABPN1Q86U42 306 aaKnown RBP eCLIP34.03■■■■□ 3.04
VGF-202ENST00000445482 TOP2AP11388 1531 aaKnown RBP33.92■■■■□ 3.02
VGF-202ENST00000445482 EIF4G1Q04637 1599 aaKnown RBP33.85■■■■□ 3.01
VGF-202ENST00000445482 CCDC88BA6NC98 1476 aa33.83■■■■□ 3.01
VGF-202ENST00000445482 ZEB1P37275 1124 aaPredicted RBP33.82■■■■□ 3.01
VGF-202ENST00000445482 BICRAQ9NZM4 1560 aa33.78■■■■□ 3
VGF-202ENST00000445482 SMARCA2P51531 1590 aa33.75■■■□□ 2.99
VGF-202ENST00000445482 ABCC8Q09428 1581 aa33.72■■■□□ 2.99
VGF-202ENST00000445482 SOGA1O94964 1423 aa33.33■■■□□ 2.93
VGF-202ENST00000445482 PEG3Q9GZU2 1588 aa33.31■■■□□ 2.92
VGF-202ENST00000445482 ATAD2BQ9ULI0 1458 aa33.23■■■□□ 2.91
VGF-202ENST00000445482 RUSC2Q8N2Y8 1516 aa33.2■■■□□ 2.91
VGF-202ENST00000445482 BAZ1BQ9UIG0 1483 aaKnown RBP33.15■■■□□ 2.9
VGF-202ENST00000445482 SCAF1Q9H7N4 1312 aaKnown RBP33.13■■■□□ 2.89
VGF-202ENST00000445482 WRNQ14191 1432 aaPredicted RBP eCLIP33.12■■■□□ 2.89
VGF-202ENST00000445482 CSRNP3Q8WYN3 585 aa33.11■■■□□ 2.89
VGF-202ENST00000445482 MYT1Q01538 1121 aa33.09■■■□□ 2.89
VGF-202ENST00000445482 UBTFP17480 764 aaKnown RBP33.05■■■□□ 2.88
VGF-202ENST00000445482 TTBK1Q5TCY1 1321 aaPredicted RBP33.04■■■□□ 2.88
VGF-202ENST00000445482 CEP162Q5TB80 1403 aa33.04■■■□□ 2.88
VGF-202ENST00000445482 EEA1Q15075 1411 aa33■■■□□ 2.87
VGF-202ENST00000445482 SYNJ1O43426 1573 aa32.97■■■□□ 2.87
VGF-202ENST00000445482 TNIKQ9UKE5 1360 aa32.96■■■□□ 2.87
VGF-202ENST00000445482 GOLGA3Q08378 1498 aa32.83■■■□□ 2.85
VGF-202ENST00000445482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.78■■■□□ 2.84
VGF-202ENST00000445482 CCER1Q8TC90 406 aaPredicted RBP32.74■■■□□ 2.83
VGF-202ENST00000445482 CEP164Q9UPV0 1460 aa32.66■■■□□ 2.82
VGF-202ENST00000445482 ACIN1Q9UKV3 1341 aaKnown RBP32.62■■■□□ 2.81
VGF-202ENST00000445482 KIF21BO75037 1637 aa32.58■■■□□ 2.81
VGF-202ENST00000445482 NCAPD3P42695 1498 aa32.58■■■□□ 2.81
VGF-202ENST00000445482 RANGAP1P46060 587 aaPredicted RBP32.58■■■□□ 2.81
VGF-202ENST00000445482 TOP2BQ02880 1626 aa32.55■■■□□ 2.8
VGF-202ENST00000445482 HMGXB3Q12766 1538 aa32.54■■■□□ 2.8
VGF-202ENST00000445482 RAPGEF2Q9Y4G8 1499 aa32.52■■■□□ 2.8
VGF-202ENST00000445482 NEUROD1Q13562 356 aa32.49■■■□□ 2.79
VGF-202ENST00000445482 CLIP1P30622 1438 aa32.49■■■□□ 2.79
VGF-202ENST00000445482 DIEXFQ68CQ4 756 aaKnown RBP32.45■■■□□ 2.79
VGF-202ENST00000445482 BIVM-ERCC5R4GMW8 1640 aa32.41■■■□□ 2.78
VGF-202ENST00000445482 CENPBP07199 599 aaPredicted RBP32.39■■■□□ 2.78
VGF-202ENST00000445482 CUX1P39880 1505 aa32.32■■■□□ 2.76
VGF-202ENST00000445482 CFTRP13569 1480 aa32.28■■■□□ 2.76
VGF-202ENST00000445482 VPS8Q8N3P4 1428 aa32.27■■■□□ 2.76
VGF-202ENST00000445482 GTF3C3Q9Y5Q9 886 aa32.26■■■□□ 2.76
VGF-202ENST00000445482 APLP2Q06481 763 aa32.23■■■□□ 2.75
VGF-202ENST00000445482 HNRNPUL2Q1KMD3 747 aaKnown RBP32.19■■■□□ 2.74
VGF-202ENST00000445482 PRXQ9BXM0 1461 aa32.16■■■□□ 2.74
VGF-202ENST00000445482 KIF27Q86VH2 1401 aa32.11■■■□□ 2.73
VGF-202ENST00000445482 ERICH3Q5RHP9 1530 aa32.1■■■□□ 2.73
VGF-202ENST00000445482 ZNF316A6NFI3 1004 aaPredicted RBP32.03■■■□□ 2.72
VGF-202ENST00000445482 CADPSQ9ULU8 1353 aa31.99■■■□□ 2.71
VGF-202ENST00000445482 PRDM2Q13029 1718 aa31.98■■■□□ 2.71
VGF-202ENST00000445482 CC2D2AQ9P2K1 1620 aa31.97■■■□□ 2.71
VGF-202ENST00000445482 ARAP1Q96P48 1450 aa31.96■■■□□ 2.71
VGF-202ENST00000445482 CUX2O14529 1486 aa31.9■■■□□ 2.7
VGF-202ENST00000445482 KANK4Q5T7N3 995 aaPredicted RBP31.85■■■□□ 2.69
VGF-202ENST00000445482 FGD5Q6ZNL6 1462 aa31.81■■■□□ 2.68
VGF-202ENST00000445482 IGF1RP08069 1367 aa31.79■■■□□ 2.68
VGF-202ENST00000445482 ARHGAP35Q9NRY4 1499 aa31.74■■■□□ 2.67
VGF-202ENST00000445482 YTHDC1Q96MU7 727 aaKnown RBP31.74■■■□□ 2.67
VGF-202ENST00000445482 FANCD2Q9BXW9 1451 aa31.71■■■□□ 2.67
VGF-202ENST00000445482 CARMIL1Q5VZK9 1371 aa31.68■■■□□ 2.66
VGF-202ENST00000445482 MIER1Q8N108 512 aa31.63■■■□□ 2.65
VGF-202ENST00000445482 NESP48681 1621 aa31.62■■■□□ 2.65
VGF-202ENST00000445482 RAD54L2Q9Y4B4 1467 aa31.56■■■□□ 2.64
VGF-202ENST00000445482 P3H3Q8IVL6 736 aa31.5■■■□□ 2.63
VGF-202ENST00000445482 ITGAEP38570 1179 aa31.49■■■□□ 2.63
VGF-202ENST00000445482 DNMBPQ6XZF7 1577 aa31.47■■■□□ 2.63
VGF-202ENST00000445482 TOPBP1Q92547 1522 aa31.46■■■□□ 2.63
VGF-202ENST00000445482 RRBP1Q9P2E9 1410 aaKnown RBP31.45■■■□□ 2.63
VGF-202ENST00000445482 POLA1P09884 1462 aaPredicted RBP31.45■■■□□ 2.63
VGF-202ENST00000445482 CCNB3Q8WWL7 1395 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms