RNA–Protein interactions for RNA: ENST00000293826.4

TNFSF12-TNFSF13-201, Transcript of TNFSF12-TNFSF13 readthrough, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF12-TNFSF13, Length 1,816 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13-201ENST00000293826 NISCHQ9Y2I1 1504 aa55.43■■■■■ 6.46
TNFSF12-TNFSF13-201ENST00000293826 CCDC180Q9P1Z9 1646 aa48.57■■■■■ 5.37
TNFSF12-TNFSF13-201ENST00000293826 ABCC9O60706 1549 aa46.62■■■■■ 5.05
TNFSF12-TNFSF13-201ENST00000293826 ZCCHC6Q5VYS8 1495 aaKnown RBP46.43■■■■■ 5.02
TNFSF12-TNFSF13-201ENST00000293826 DCAF8L2P0C7V8 631 aa46.05■■■■■ 4.96
TNFSF12-TNFSF13-201ENST00000293826 DCAF1Q9Y4B6 1507 aa45.73■■■■■ 4.91
TNFSF12-TNFSF13-201ENST00000293826 MYO15BQ96JP2 1530 aa45.39■■■■■ 4.86
TNFSF12-TNFSF13-201ENST00000293826 NACADO15069 1562 aa45.36■■■■■ 4.85
TNFSF12-TNFSF13-201ENST00000293826 RB1CC1Q8TDY2 1594 aa45.15■■■■■ 4.82
TNFSF12-TNFSF13-201ENST00000293826 SHROOM4Q9ULL8 1493 aa44.92■■■■■ 4.78
TNFSF12-TNFSF13-201ENST00000293826 SCRIBQ14160 1630 aa44.71■■■■■ 4.75
TNFSF12-TNFSF13-201ENST00000293826 UNC13AQ9UPW8 1703 aa44.35■■■■■ 4.69
TNFSF12-TNFSF13-201ENST00000293826 BICRAQ9NZM4 1560 aa43.9■■■■■ 4.62
TNFSF12-TNFSF13-201ENST00000293826 PABPN1Q86U42 306 aaKnown RBP eCLIP43.87■■■■■ 4.61
TNFSF12-TNFSF13-201ENST00000293826 CECR2Q9BXF3 1484 aa43.21■■■■■ 4.51
TNFSF12-TNFSF13-201ENST00000293826 MROH2BQ7Z745 1585 aa42.86■■■■■ 4.45
TNFSF12-TNFSF13-201ENST00000293826 SUPT5HO00267 1087 aaKnown RBP42.85■■■■■ 4.45
TNFSF12-TNFSF13-201ENST00000293826 BAZ1AQ9NRL2 1556 aaPredicted RBP42.81■■■■■ 4.44
TNFSF12-TNFSF13-201ENST00000293826 RSF1Q96T23 1441 aaPredicted RBP42.78■■■■■ 4.44
TNFSF12-TNFSF13-201ENST00000293826 SMARCA4P51532 1647 aa42.76■■■■■ 4.44
TNFSF12-TNFSF13-201ENST00000293826 EIF4G1Q04637 1599 aaKnown RBP42.59■■■■■ 4.41
TNFSF12-TNFSF13-201ENST00000293826 WIZO95785 1651 aa42.5■■■■■ 4.39
TNFSF12-TNFSF13-201ENST00000293826 ATAD2BQ9ULI0 1458 aa42.2■■■■■ 4.35
TNFSF12-TNFSF13-201ENST00000293826 PEG3Q9GZU2 1588 aa42.2■■■■■ 4.35
TNFSF12-TNFSF13-201ENST00000293826 CC2D2AQ9P2K1 1620 aa42.14■■■■■ 4.34
TNFSF12-TNFSF13-201ENST00000293826 SMARCA2P51531 1590 aa42.09■■■■■ 4.33
TNFSF12-TNFSF13-201ENST00000293826 TOP2AP11388 1531 aaKnown RBP41.95■■■■■ 4.31
TNFSF12-TNFSF13-201ENST00000293826 BAZ1BQ9UIG0 1483 aaKnown RBP41.91■■■■■ 4.3
TNFSF12-TNFSF13-201ENST00000293826 NCAPD3P42695 1498 aa41.89■■■■■ 4.3
TNFSF12-TNFSF13-201ENST00000293826 HMGXB3Q12766 1538 aa41.77■■■■■ 4.28
TNFSF12-TNFSF13-201ENST00000293826 DNAJC5BQ9UF47 199 aa41.74■■■■■ 4.27
TNFSF12-TNFSF13-201ENST00000293826 CCDC88BA6NC98 1476 aa41.55■■■■■ 4.24
TNFSF12-TNFSF13-201ENST00000293826 CFTRP13569 1480 aa40.81■■■■■ 4.12
TNFSF12-TNFSF13-201ENST00000293826 CADPSQ9ULU8 1353 aa40.79■■■■■ 4.12
TNFSF12-TNFSF13-201ENST00000293826 NESP48681 1621 aa40.77■■■■■ 4.12
TNFSF12-TNFSF13-201ENST00000293826 CHIC1Q5VXU3 224 aa40.65■■■■■ 4.1
TNFSF12-TNFSF13-201ENST00000293826 LAMC3Q9Y6N6 1575 aa40.57■■■■■ 4.09
TNFSF12-TNFSF13-201ENST00000293826 PRDM2Q13029 1718 aa40.57■■■■■ 4.09
TNFSF12-TNFSF13-201ENST00000293826 ABCC8Q09428 1581 aa40.55■■■■■ 4.08
TNFSF12-TNFSF13-201ENST00000293826 FANCD2Q9BXW9 1451 aa40.38■■■■■ 4.05
TNFSF12-TNFSF13-201ENST00000293826 WRNQ14191 1432 aaPredicted RBP eCLIP40.26■■■■■ 4.03
TNFSF12-TNFSF13-201ENST00000293826 TRIM41Q8WV44 630 aa40.26■■■■■ 4.03
TNFSF12-TNFSF13-201ENST00000293826 PDS5BQ9NTI5 1447 aa40.25■■■■■ 4.03
TNFSF12-TNFSF13-201ENST00000293826 KIF21AQ7Z4S6 1674 aa40.24■■■■■ 4.03
TNFSF12-TNFSF13-201ENST00000293826 SYNJ1O43426 1573 aa40.19■■■■■ 4.02
TNFSF12-TNFSF13-201ENST00000293826 CEP164Q9UPV0 1460 aa40.16■■■■■ 4.02
TNFSF12-TNFSF13-201ENST00000293826 CUX1P39880 1505 aa40.11■■■■■ 4.01
TNFSF12-TNFSF13-201ENST00000293826 TOP2BQ02880 1626 aa40■■■■□ 3.99
TNFSF12-TNFSF13-201ENST00000293826 BIVM-ERCC5R4GMW8 1640 aa39.98■■■■□ 3.99
TNFSF12-TNFSF13-201ENST00000293826 ERCC6Q03468 1493 aa39.96■■■■□ 3.99
TNFSF12-TNFSF13-201ENST00000293826 URB2Q14146 1524 aaKnown RBP39.95■■■■□ 3.99
TNFSF12-TNFSF13-201ENST00000293826 DNMBPQ6XZF7 1577 aa39.88■■■■□ 3.97
TNFSF12-TNFSF13-201ENST00000293826 TOPBP1Q92547 1522 aa39.88■■■■□ 3.97
TNFSF12-TNFSF13-201ENST00000293826 MRC2Q9UBG0 1479 aa39.82■■■■□ 3.97
TNFSF12-TNFSF13-201ENST00000293826 FGD5Q6ZNL6 1462 aa39.75■■■■□ 3.95
TNFSF12-TNFSF13-201ENST00000293826 THOC2Q8NI27 1593 aaKnown RBP39.71■■■■□ 3.95
TNFSF12-TNFSF13-201ENST00000293826 POLA1P09884 1462 aaPredicted RBP39.65■■■■□ 3.94
TNFSF12-TNFSF13-201ENST00000293826 WDR62O43379 1518 aa39.64■■■■□ 3.94
TNFSF12-TNFSF13-201ENST00000293826 SOGA1O94964 1423 aa39.64■■■■□ 3.94
TNFSF12-TNFSF13-201ENST00000293826 FAM9AQ8IZU1 332 aaPredicted RBP39.63■■■■□ 3.93
TNFSF12-TNFSF13-201ENST00000293826 RUSC2Q8N2Y8 1516 aa39.57■■■■□ 3.93
TNFSF12-TNFSF13-201ENST00000293826 RAD54L2Q9Y4B4 1467 aa39.56■■■■□ 3.92
TNFSF12-TNFSF13-201ENST00000293826 CUX2O14529 1486 aa39.43■■■■□ 3.9
TNFSF12-TNFSF13-201ENST00000293826 TARBP1Q13395 1621 aaKnown RBP39.35■■■■□ 3.89
TNFSF12-TNFSF13-201ENST00000293826 ABCA10Q8WWZ4 1543 aa39.33■■■■□ 3.89
TNFSF12-TNFSF13-201ENST00000293826 WDR97A6NE52 1622 aa39.31■■■■□ 3.88
TNFSF12-TNFSF13-201ENST00000293826 KIF27Q86VH2 1401 aa39.26■■■■□ 3.87
TNFSF12-TNFSF13-201ENST00000293826 EEA1Q15075 1411 aa39.24■■■■□ 3.87
TNFSF12-TNFSF13-201ENST00000293826 TDRD9Q8NDG6 1382 aaKnown RBP39.21■■■■□ 3.87
TNFSF12-TNFSF13-201ENST00000293826 IFT140Q96RY7 1462 aa39.21■■■■□ 3.87
TNFSF12-TNFSF13-201ENST00000293826 CSRNP3Q8WYN3 585 aa39.19■■■■□ 3.86
TNFSF12-TNFSF13-201ENST00000293826 EHMT2Q96KQ7 1210 aa39.17■■■■□ 3.86
TNFSF12-TNFSF13-201ENST00000293826 LOC105371045A0A1W2PR82 267 aa39.16■■■■□ 3.86
TNFSF12-TNFSF13-201ENST00000293826 ZNF608Q9ULD9 1512 aaPredicted RBP39.15■■■■□ 3.86
TNFSF12-TNFSF13-201ENST00000293826 ABCA5Q8WWZ7 1642 aa39.1■■■■□ 3.85
TNFSF12-TNFSF13-201ENST00000293826 AQRO60306 1485 aaKnown RBP eCLIP39.08■■■■□ 3.85
TNFSF12-TNFSF13-201ENST00000293826 GAPVD1Q14C86 1478 aa39.04■■■■□ 3.84
TNFSF12-TNFSF13-201ENST00000293826 IGF1RP08069 1367 aa39.02■■■■□ 3.84
TNFSF12-TNFSF13-201ENST00000293826 EIF4G3O43432 1585 aaKnown RBP38.96■■■■□ 3.83
TNFSF12-TNFSF13-201ENST00000293826 PBRM1Q86U86 1689 aa38.9■■■■□ 3.82
TNFSF12-TNFSF13-201ENST00000293826 PRXQ9BXM0 1461 aa38.87■■■■□ 3.81
TNFSF12-TNFSF13-201ENST00000293826 KIF21BO75037 1637 aa38.86■■■■□ 3.81
TNFSF12-TNFSF13-201ENST00000293826 ERICH3Q5RHP9 1530 aa38.84■■■■□ 3.81
TNFSF12-TNFSF13-201ENST00000293826 RAPGEF2Q9Y4G8 1499 aa38.84■■■■□ 3.81
TNFSF12-TNFSF13-201ENST00000293826 CARMIL1Q5VZK9 1371 aa38.8■■■■□ 3.8
TNFSF12-TNFSF13-201ENST00000293826 GRIN2BQ13224 1484 aa38.8■■■■□ 3.8
TNFSF12-TNFSF13-201ENST00000293826 GOLGA3Q08378 1498 aa38.76■■■■□ 3.8
TNFSF12-TNFSF13-201ENST00000293826 CUL7Q14999 1698 aa38.73■■■■□ 3.79
TNFSF12-TNFSF13-201ENST00000293826 SNAPC4Q5SXM2 1469 aa38.69■■■■□ 3.78
TNFSF12-TNFSF13-201ENST00000293826 UBTFP17480 764 aaKnown RBP38.66■■■■□ 3.78
TNFSF12-TNFSF13-201ENST00000293826 ADAMTS12P58397 1594 aa38.64■■■■□ 3.78
TNFSF12-TNFSF13-201ENST00000293826 FHAD1B1AJZ9 1412 aa38.57■■■■□ 3.76
TNFSF12-TNFSF13-201ENST00000293826 MAGI1Q96QZ7 1491 aaPredicted RBP38.52■■■■□ 3.76
TNFSF12-TNFSF13-201ENST00000293826 TNIKQ9UKE5 1360 aa38.51■■■■□ 3.75
TNFSF12-TNFSF13-201ENST00000293826 SYNJ2O15056 1496 aa38.4■■■■□ 3.74
TNFSF12-TNFSF13-201ENST00000293826 FBLN2P98095 1184 aa38.39■■■■□ 3.74
TNFSF12-TNFSF13-201ENST00000293826 CHMP7Q8WUX9 453 aaPredicted RBP38.35■■■■□ 3.73
TNFSF12-TNFSF13-201ENST00000293826 GRIN2AQ12879 1464 aa38.35■■■■□ 3.73
TNFSF12-TNFSF13-201ENST00000293826 RANGAP1P46060 587 aaPredicted RBP38.35■■■■□ 3.73
TNFSF12-TNFSF13-201ENST00000293826 CEP162Q5TB80 1403 aa38.31■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms