Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 NOP56-214ENST00000484998 998 ntTSL 58.32□□□□□ -1.083e-10■□□□□ 11
EIF3DO15371 NOP56-211ENST00000471023 592 ntTSL 28.12□□□□□ -1.113e-10■□□□□ 11
EIF3DO15371 NOP56-212ENST00000480447 651 ntTSL 26.67□□□□□ -1.343e-10■□□□□ 11
EIF3DO15371 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.194e-12■□□□□ 11
EIF3DO15371 CENPW-201ENST00000368325 528 ntTSL 3 BASIC9.6□□□□□ -0.877e-10■□□□□ 11
EIF3DO15371 CENPW-202ENST00000368326 443 ntTSL 2 BASIC9.11□□□□□ -0.957e-10■□□□□ 11
EIF3DO15371 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.477e-10■□□□□ 11
EIF3DO15371 USP34-210ENST00000472689 776 ntTSL 54.35□□□□□ -1.715e-6■□□□□ 10.9
EIF3DO15371 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.67□□□□□ -1.822e-6■□□□□ 10.9
EIF3DO15371 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.214e-7■□□□□ 10.9
EIF3DO15371 PCNX3-203ENST00000530174 1229 ntTSL 1 (best)20.37■□□□□ 0.851e-6■□□□□ 10.9
EIF3DO15371 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.115e-10■□□□□ 10.9
EIF3DO15371 MED16-209ENST00000592943 1628 ntTSL 1 (best)19.79■□□□□ 0.766e-8■□□□□ 10.9
EIF3DO15371 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.19■□□□□ 0.666e-8■□□□□ 10.9
EIF3DO15371 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.17■□□□□ 0.666e-8■□□□□ 10.9
EIF3DO15371 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.33■□□□□ 0.526e-8■□□□□ 10.9
EIF3DO15371 MED16-212ENST00000607471 2004 ntTSL 1 (best)17.29■□□□□ 0.366e-8■□□□□ 10.9
EIF3DO15371 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.266e-8■□□□□ 10.9
EIF3DO15371 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.236e-8■□□□□ 10.9
EIF3DO15371 MED16-205ENST00000586017 1403 ntTSL 1 (best)16.21■□□□□ 0.196e-8■□□□□ 10.9
EIF3DO15371 NDE1-211ENST00000576502 1131 ntTSL 215□□□□□ -0.016e-8■□□□□ 10.9
EIF3DO15371 MED16-210ENST00000606248 3181 ntTSL 1 (best)14.99□□□□□ -0.016e-8■□□□□ 10.9
EIF3DO15371 NDE1-209ENST00000574109 843 ntTSL 314.94□□□□□ -0.026e-8■□□□□ 10.9
EIF3DO15371 MED16-211ENST00000606828 599 ntTSL 1 (best)14.84□□□□□ -0.036e-8■□□□□ 10.9
EIF3DO15371 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.096e-8■□□□□ 10.9
EIF3DO15371 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.156e-8■□□□□ 10.9
EIF3DO15371 NDE1-206ENST00000572967 484 ntTSL 312.93□□□□□ -0.346e-8■□□□□ 10.9
EIF3DO15371 NDE1-212ENST00000577101 575 ntTSL 410.71□□□□□ -0.696e-8■□□□□ 10.9
EIF3DO15371 NDE1-208ENST00000573694 411 ntTSL 310.51□□□□□ -0.736e-8■□□□□ 10.9
EIF3DO15371 NDE1-201ENST00000396354 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.826e-8■□□□□ 10.9
EIF3DO15371 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.056e-8■□□□□ 10.9
EIF3DO15371 UBR4-209ENST00000465036 392 ntTSL 23.98□□□□□ -1.776e-8■□□□□ 10.9
EIF3DO15371 ACACA-238ENST00000616352 1626 ntTSL 1 (best)25.34■■□□□ 1.653e-10■□□□□ 10.9
EIF3DO15371 ACACA-239ENST00000617548 1063 ntTSL 1 (best)24.97■■□□□ 1.593e-10■□□□□ 10.9
EIF3DO15371 ACACA-236ENST00000615229 1468 ntTSL 1 (best)23.68■■□□□ 1.383e-10■□□□□ 10.9
EIF3DO15371 ACACA-235ENST00000614789 662 ntTSL 1 (best)12.19□□□□□ -0.463e-10■□□□□ 10.9
EIF3DO15371 ACACA-246ENST00000621960 551 ntTSL 510.17□□□□□ -0.783e-10■□□□□ 10.9
EIF3DO15371 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8.78□□□□□ -13e-10■□□□□ 10.9
EIF3DO15371 ACACA-224ENST00000612007 451 ntTSL 52.48□□□□□ -2.013e-10■□□□□ 10.9
EIF3DO15371 LRP1-211ENST00000556356 5114 ntTSL 216.37■□□□□ 0.212e-7■□□□□ 10.9
EIF3DO15371 CDK12-209ENST00000584632 4165 ntTSL 514.47□□□□□ -0.093e-7■□□□□ 10.8
EIF3DO15371 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.183e-7■□□□□ 10.8
EIF3DO15371 CHD4-214ENST00000545942 1317 ntTSL 1 (best)24.48■■□□□ 1.518e-7■□□□□ 10.8
EIF3DO15371 MACF1-205ENST00000372925 14496 ntTSL 56.53□□□□□ -1.362e-6■□□□□ 10.8
EIF3DO15371 EP400-208ENST00000611841 3129 ntTSL 512.33□□□□□ -0.443e-6■□□□□ 10.8
EIF3DO15371 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.863e-6■□□□□ 10.8
EIF3DO15371 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.873e-6■□□□□ 10.8
EIF3DO15371 CFAP20-207ENST00000567660 731 ntTSL 218.04■□□□□ 0.482e-7■□□□□ 10.8
EIF3DO15371 CFAP20-205ENST00000565880 572 ntTSL 316.08■□□□□ 0.162e-7■□□□□ 10.8
EIF3DO15371 CFAP20-203ENST00000562622 1605 ntTSL 515.71■□□□□ 0.112e-7■□□□□ 10.8
EIF3DO15371 ADH6-206ENST00000508558 863 ntTSL 515.37■□□□□ 0.052e-7■□□□□ 10.8
EIF3DO15371 ADH6-205ENST00000507484 991 ntTSL 214.83□□□□□ -0.042e-7■□□□□ 10.8
EIF3DO15371 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.342e-7■□□□□ 10.8
EIF3DO15371 CFAP20-206ENST00000567092 710 ntTSL 212.38□□□□□ -0.432e-7■□□□□ 10.8
EIF3DO15371 ADH6-201ENST00000237653 1691 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.732e-7■□□□□ 10.8
EIF3DO15371 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.092e-7■□□□□ 10.8
EIF3DO15371 ADH6-208ENST00000513262 580 ntTSL 45.77□□□□□ -1.492e-7■□□□□ 10.8
EIF3DO15371 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.71□□□□□ -1.52e-7■□□□□ 10.8
EIF3DO15371 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.317e-8■□□□□ 10.8
EIF3DO15371 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.357e-8■□□□□ 10.8
EIF3DO15371 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.67■□□□□ 0.12e-7■□□□□ 10.8
EIF3DO15371 TMED7-203ENST00000508420 572 ntTSL 424.39■■□□□ 1.491e-13■□□□□ 10.8
EIF3DO15371 EIF4G2-203ENST00000524932 1286 ntTSL 522.49■■□□□ 1.191e-13■□□□□ 10.8
EIF3DO15371 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.411e-13■□□□□ 10.8
EIF3DO15371 EIF4G2-228ENST00000534246 523 ntTSL 217.4■□□□□ 0.381e-13■□□□□ 10.8
EIF3DO15371 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.08■□□□□ 0.321e-13■□□□□ 10.8
EIF3DO15371 EIF4G2-210ENST00000527419 571 ntTSL 515.98■□□□□ 0.151e-13■□□□□ 10.8
EIF3DO15371 TMED7-202ENST00000503010 805 ntTSL 215.38■□□□□ 0.051e-13■□□□□ 10.8
EIF3DO15371 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.081e-13■□□□□ 10.8
EIF3DO15371 EIF4G2-216ENST00000530702 563 ntTSL 213.88□□□□□ -0.191e-13■□□□□ 10.8
EIF3DO15371 EIF4G2-214ENST00000530211 591 ntTSL 212.57□□□□□ -0.41e-13■□□□□ 10.8
EIF3DO15371 EIF4G2-219ENST00000531507 591 ntTSL 510.99□□□□□ -0.651e-13■□□□□ 10.8
EIF3DO15371 EIF4G2-226ENST00000532570 573 ntTSL 510.49□□□□□ -0.731e-13■□□□□ 10.8
EIF3DO15371 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.821e-13■□□□□ 10.8
EIF3DO15371 EIF4G2-206ENST00000525972 584 ntTSL 26.18□□□□□ -1.421e-13■□□□□ 10.8
EIF3DO15371 EIF4G2-212ENST00000528562 601 ntTSL 46.14□□□□□ -1.431e-13■□□□□ 10.8
EIF3DO15371 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.815e-12■□□□□ 10.7
EIF3DO15371 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.795e-12■□□□□ 10.7
EIF3DO15371 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.71■□□□□ 0.435e-12■□□□□ 10.7
EIF3DO15371 SERPINF2-205ENST00000453723 838 ntTSL 316.43■□□□□ 0.225e-12■□□□□ 10.7
EIF3DO15371 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.385e-6■□□□□ 10.7
EIF3DO15371 VPS13A-212ENST00000493341 2001 ntTSL 24.62□□□□□ -1.675e-6■□□□□ 10.7
EIF3DO15371 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.755e-6■□□□□ 10.7
EIF3DO15371 VPS13A-208ENST00000423463 2702 ntTSL 22.65□□□□□ -1.995e-6■□□□□ 10.7
EIF3DO15371 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC13.84□□□□□ -0.191e-29■□□□□ 10.7
EIF3DO15371 HSP90AA1-208ENST00000557234 584 ntTSL 319.31■□□□□ 0.684e-10■□□□□ 10.7
EIF3DO15371 HSP90AA1-206ENST00000556554 552 ntTSL 26.95□□□□□ -1.34e-10■□□□□ 10.7
EIF3DO15371 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.482e-7■□□□□ 10.7
EIF3DO15371 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.232e-7■□□□□ 10.7
EIF3DO15371 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.172e-7■□□□□ 10.7
EIF3DO15371 TJP2-211ENST00000636247 3725 ntTSL 1 (best)13.87□□□□□ -0.192e-7■□□□□ 10.7
EIF3DO15371 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.292e-7■□□□□ 10.7
EIF3DO15371 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.15e-7■□□□□ 10.7
EIF3DO15371 SMG1-211ENST00000565324 12465 ntTSL 1 (best)5.66□□□□□ -1.55e-7■□□□□ 10.7
EIF3DO15371 EIF4G1-237ENST00000485712 474 ntTSL 420.48■□□□□ 0.875e-10■□□□□ 10.7
EIF3DO15371 EIF4G1-227ENST00000455679 542 ntTSL 414.63□□□□□ -0.075e-10■□□□□ 10.7
EIF3DO15371 EIF4G1-214ENST00000427141 730 ntTSL 513.26□□□□□ -0.295e-10■□□□□ 10.7
EIF3DO15371 EIF4G1-220ENST00000440448 578 ntTSL 412.01□□□□□ -0.495e-10■□□□□ 10.7
EIF3DO15371 EIF4G1-223ENST00000444134 558 ntTSL 511.89□□□□□ -0.515e-10■□□□□ 10.7
EIF3DO15371 SMG1-208ENST00000563448 2016 ntTSL 211.21□□□□□ -0.611e-6■□□□□ 10.6
Retrieved 100 of 4,069 protein–RNA pairs in 94.1 ms