RNA–Protein interactions for RNA: ENST00000508420.1

TMED7-203, Transcript of transmembrane p24 trafficking protein 7, humanhuman

TSL 4

Gene TMED7, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED7-203ENST00000508420 NISCHQ9Y2I1 1504 aa56.55■■■■■ 6.64
TMED7-203ENST00000508420 CCDC180Q9P1Z9 1646 aa50.73■■■■■ 5.71
TMED7-203ENST00000508420 ABCC9O60706 1549 aa50.43■■■■■ 5.66
TMED7-203ENST00000508420 RB1CC1Q8TDY2 1594 aa48.22■■■■■ 5.31
TMED7-203ENST00000508420 NACADO15069 1562 aa47.95■■■■■ 5.27
TMED7-203ENST00000508420 DCAF8L2P0C7V8 631 aa47.63■■■■■ 5.22
TMED7-203ENST00000508420 MYO15BQ96JP2 1530 aa47.4■■■■■ 5.18
TMED7-203ENST00000508420 DNAJC5BQ9UF47 199 aa47.1■■■■■ 5.13
TMED7-203ENST00000508420 PABPN1Q86U42 306 aaKnown RBP eCLIP46.96■■■■■ 5.11
TMED7-203ENST00000508420 UNC13AQ9UPW8 1703 aa46.94■■■■■ 5.11
TMED7-203ENST00000508420 ZCCHC6Q5VYS8 1495 aaKnown RBP46.89■■■■■ 5.1
TMED7-203ENST00000508420 DCAF1Q9Y4B6 1507 aa46.83■■■■■ 5.09
TMED7-203ENST00000508420 BICRAQ9NZM4 1560 aa46.67■■■■■ 5.06
TMED7-203ENST00000508420 SHROOM4Q9ULL8 1493 aa46.31■■■■■ 5
TMED7-203ENST00000508420 SCRIBQ14160 1630 aa46.08■■■■■ 4.97
TMED7-203ENST00000508420 CC2D2AQ9P2K1 1620 aa45.59■■■■■ 4.89
TMED7-203ENST00000508420 EIF4G1Q04637 1599 aaKnown RBP45.57■■■■■ 4.89
TMED7-203ENST00000508420 CECR2Q9BXF3 1484 aa45.49■■■■■ 4.87
TMED7-203ENST00000508420 NCAPD3P42695 1498 aa44.26■■■■■ 4.68
TMED7-203ENST00000508420 ATAD2BQ9ULI0 1458 aa44.08■■■■■ 4.65
TMED7-203ENST00000508420 SMARCA4P51532 1647 aa44.05■■■■■ 4.64
TMED7-203ENST00000508420 SMARCA2P51531 1590 aa44.04■■■■■ 4.64
TMED7-203ENST00000508420 BAZ1AQ9NRL2 1556 aaPredicted RBP43.93■■■■■ 4.62
TMED7-203ENST00000508420 HMGXB3Q12766 1538 aa43.93■■■■■ 4.62
TMED7-203ENST00000508420 PEG3Q9GZU2 1588 aa43.7■■■■■ 4.59
TMED7-203ENST00000508420 BAZ1BQ9UIG0 1483 aaKnown RBP43.68■■■■■ 4.58
TMED7-203ENST00000508420 ERCC6Q03468 1493 aa43.63■■■■■ 4.57
TMED7-203ENST00000508420 CUX2O14529 1486 aa43.55■■■■■ 4.56
TMED7-203ENST00000508420 MROH2BQ7Z745 1585 aa43.5■■■■■ 4.55
TMED7-203ENST00000508420 NESP48681 1621 aa43.33■■■■■ 4.53
TMED7-203ENST00000508420 DNAJC5Q9H3Z4 198 aa43.3■■■■■ 4.52
TMED7-203ENST00000508420 LAMC3Q9Y6N6 1575 aa43.23■■■■■ 4.51
TMED7-203ENST00000508420 PDS5BQ9NTI5 1447 aa43.01■■■■■ 4.48
TMED7-203ENST00000508420 WIZO95785 1651 aa42.96■■■■■ 4.47
TMED7-203ENST00000508420 THOC2Q8NI27 1593 aaKnown RBP42.91■■■■■ 4.46
TMED7-203ENST00000508420 CADPSQ9ULU8 1353 aa42.9■■■■■ 4.46
TMED7-203ENST00000508420 KIF21AQ7Z4S6 1674 aa42.79■■■■■ 4.44
TMED7-203ENST00000508420 RSF1Q96T23 1441 aaPredicted RBP42.71■■■■■ 4.43
TMED7-203ENST00000508420 MRC2Q9UBG0 1479 aa42.55■■■■■ 4.4
TMED7-203ENST00000508420 TOP2AP11388 1531 aaKnown RBP42.53■■■■■ 4.4
TMED7-203ENST00000508420 CFTRP13569 1480 aa42.43■■■■■ 4.38
TMED7-203ENST00000508420 WDR62O43379 1518 aa42.43■■■■■ 4.38
TMED7-203ENST00000508420 CEP164Q9UPV0 1460 aa42.43■■■■■ 4.38
TMED7-203ENST00000508420 FANCD2Q9BXW9 1451 aa42.36■■■■■ 4.37
TMED7-203ENST00000508420 CCDC88BA6NC98 1476 aa42.02■■■■■ 4.32
TMED7-203ENST00000508420 PRDM2Q13029 1718 aa41.98■■■■■ 4.31
TMED7-203ENST00000508420 URB2Q14146 1524 aaKnown RBP41.95■■■■■ 4.31
TMED7-203ENST00000508420 ABCC8Q09428 1581 aa41.66■■■■■ 4.26
TMED7-203ENST00000508420 IFT140Q96RY7 1462 aa41.6■■■■■ 4.25
TMED7-203ENST00000508420 OSCARQ8IYS5 282 aa41.6■■■■■ 4.25
TMED7-203ENST00000508420 TOPBP1Q92547 1522 aa41.57■■■■■ 4.25
TMED7-203ENST00000508420 DNMBPQ6XZF7 1577 aa41.46■■■■■ 4.23
TMED7-203ENST00000508420 TRIM41Q8WV44 630 aa41.38■■■■■ 4.21
TMED7-203ENST00000508420 ZNF608Q9ULD9 1512 aaPredicted RBP41.38■■■■■ 4.21
TMED7-203ENST00000508420 EIF4G3O43432 1585 aaKnown RBP41.2■■■■■ 4.19
TMED7-203ENST00000508420 TARBP1Q13395 1621 aaKnown RBP41.17■■■■■ 4.18
TMED7-203ENST00000508420 POLA1P09884 1462 aaPredicted RBP41.15■■■■■ 4.18
TMED7-203ENST00000508420 AQRO60306 1485 aaKnown RBP eCLIP41.06■■■■■ 4.16
TMED7-203ENST00000508420 SOGA1O94964 1423 aa41.01■■■■■ 4.16
TMED7-203ENST00000508420 RAD54L2Q9Y4B4 1467 aa40.94■■■■■ 4.14
TMED7-203ENST00000508420 WDR97A6NE52 1622 aa40.93■■■■■ 4.14
TMED7-203ENST00000508420 FGD5Q6ZNL6 1462 aa40.9■■■■■ 4.14
TMED7-203ENST00000508420 RIMBP3CA6NJZ7 1639 aa40.9■■■■■ 4.14
TMED7-203ENST00000508420 RIMBP3BA6NNM3 1639 aa40.9■■■■■ 4.14
TMED7-203ENST00000508420 RIMBP3Q9UFD9 1639 aa40.9■■■■■ 4.14
TMED7-203ENST00000508420 SUPT5HO00267 1087 aaKnown RBP40.9■■■■■ 4.14
TMED7-203ENST00000508420 CUX1P39880 1505 aa40.87■■■■■ 4.13
TMED7-203ENST00000508420 TDRD9Q8NDG6 1382 aaKnown RBP40.85■■■■■ 4.13
TMED7-203ENST00000508420 ARHGEF11O15085 1522 aa40.83■■■■■ 4.13
TMED7-203ENST00000508420 CHD1O14646 1710 aa40.82■■■■■ 4.13
TMED7-203ENST00000508420 FBLN2P98095 1184 aa40.8■■■■■ 4.12
TMED7-203ENST00000508420 GRIN2BQ13224 1484 aa40.66■■■■■ 4.1
TMED7-203ENST00000508420 SNAPC4Q5SXM2 1469 aa40.66■■■■■ 4.1
TMED7-203ENST00000508420 MAGI1Q96QZ7 1491 aaPredicted RBP40.66■■■■■ 4.1
TMED7-203ENST00000508420 CHMP7Q8WUX9 453 aaPredicted RBP40.6■■■■■ 4.09
TMED7-203ENST00000508420 CYB5RLQ6IPT4 315 aa40.53■■■■■ 4.08
TMED7-203ENST00000508420 ABCA10Q8WWZ4 1543 aa40.52■■■■■ 4.08
TMED7-203ENST00000508420 GAPVD1Q14C86 1478 aa40.51■■■■■ 4.08
TMED7-203ENST00000508420 SYNJ2O15056 1496 aa40.5■■■■■ 4.07
TMED7-203ENST00000508420 SYNJ1O43426 1573 aa40.48■■■■■ 4.07
TMED7-203ENST00000508420 WRNQ14191 1432 aaPredicted RBP eCLIP40.42■■■■■ 4.06
TMED7-203ENST00000508420 CLASP1Q7Z460 1538 aa40.42■■■■■ 4.06
TMED7-203ENST00000508420 PBRM1Q86U86 1689 aa40.41■■■■■ 4.06
TMED7-203ENST00000508420 ARAP1Q96P48 1450 aa40.4■■■■■ 4.06
TMED7-203ENST00000508420 ABCA5Q8WWZ7 1642 aa40.38■■■■■ 4.05
TMED7-203ENST00000508420 TOP2BQ02880 1626 aa40.32■■■■■ 4.05
TMED7-203ENST00000508420 BIVM-ERCC5R4GMW8 1640 aa40.31■■■■■ 4.04
TMED7-203ENST00000508420 GRIN2AQ12879 1464 aa40.1■■■■■ 4.01
TMED7-203ENST00000508420 TRHP20396 242 aaPredicted RBP40.06■■■■■ 4
TMED7-203ENST00000508420 ADAMTS12P58397 1594 aa40.06■■■■■ 4
TMED7-203ENST00000508420 FHAD1B1AJZ9 1412 aa40.04■■■■■ 4
TMED7-203ENST00000508420 ERICH3Q5RHP9 1530 aa40.04■■■■■ 4
TMED7-203ENST00000508420 NUP160Q12769 1436 aa39.97■■■■□ 3.99
TMED7-203ENST00000508420 CEP170Q5SW79 1584 aa39.88■■■■□ 3.97
TMED7-203ENST00000508420 SHROOM2Q13796 1616 aa39.75■■■■□ 3.95
TMED7-203ENST00000508420 ERCC6L2Q5T890 1561 aa39.69■■■■□ 3.94
TMED7-203ENST00000508420 KIF27Q86VH2 1401 aa39.61■■■■□ 3.93
TMED7-203ENST00000508420 JPH4Q96JJ6 628 aa39.6■■■■□ 3.93
TMED7-203ENST00000508420 PRG4Q92954 1404 aaPredicted RBP39.56■■■■□ 3.92
TMED7-203ENST00000508420 IGF1RP08069 1367 aa39.52■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms