RNA–Protein interactions for RNA: ENST00000503010.1

TMED7-202, Transcript of transmembrane p24 trafficking protein 7, humanhuman

TSL 2

Gene TMED7, Length 805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED7-202ENST00000503010 AEBP2Q6ZN18 517 aaPredicted RBP35.09■■■■□ 3.21
TMED7-202ENST00000503010 CHIC1Q5VXU3 224 aa34.2■■■■□ 3.07
TMED7-202ENST00000503010 NISCHQ9Y2I1 1504 aa33.19■■■□□ 2.9
TMED7-202ENST00000503010 PHF23Q9BUL5 403 aaPredicted RBP30.07■■■□□ 2.4
TMED7-202ENST00000503010 SENP3Q9H4L4 574 aaPredicted RBP29.78■■■□□ 2.36
TMED7-202ENST00000503010 CCDC180Q9P1Z9 1646 aa29.48■■■□□ 2.31
TMED7-202ENST00000503010 ABCC9O60706 1549 aa28.24■■■□□ 2.11
TMED7-202ENST00000503010 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
TMED7-202ENST00000503010 PLPPR3Q6T4P5 718 aa27.75■■■□□ 2.03
TMED7-202ENST00000503010 FOXD1Q16676 465 aa27.66■■■□□ 2.02
TMED7-202ENST00000503010 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
TMED7-202ENST00000503010 DCAF8L2P0C7V8 631 aa27.46■■□□□ 1.99
TMED7-202ENST00000503010 NACADO15069 1562 aa27.46■■□□□ 1.99
TMED7-202ENST00000503010 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
TMED7-202ENST00000503010 MYO15BQ96JP2 1530 aa27.37■■□□□ 1.97
TMED7-202ENST00000503010 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
TMED7-202ENST00000503010 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
TMED7-202ENST00000503010 PPP6R1Q9UPN7 881 aa26.56■■□□□ 1.84
TMED7-202ENST00000503010 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
TMED7-202ENST00000503010 BICRAQ9NZM4 1560 aa26.55■■□□□ 1.84
TMED7-202ENST00000503010 ADRA2BP18089 450 aa26.54■■□□□ 1.84
TMED7-202ENST00000503010 PABPN1Q86U42 306 aaKnown RBP eCLIP26.35■■□□□ 1.81
TMED7-202ENST00000503010 PIAS4Q8N2W9 510 aaPredicted RBP26.07■■□□□ 1.76
TMED7-202ENST00000503010 EIF4G1Q04637 1599 aaKnown RBP25.83■■□□□ 1.73
TMED7-202ENST00000503010 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
TMED7-202ENST00000503010 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
TMED7-202ENST00000503010 BAZ1AQ9NRL2 1556 aaPredicted RBP25.74■■□□□ 1.71
TMED7-202ENST00000503010 CC2D2AQ9P2K1 1620 aa25.63■■□□□ 1.69
TMED7-202ENST00000503010 MROH2BQ7Z745 1585 aa25.61■■□□□ 1.69
TMED7-202ENST00000503010 MSH5O43196 834 aa25.52■■□□□ 1.68
TMED7-202ENST00000503010 WIZO95785 1651 aa25.48■■□□□ 1.67
TMED7-202ENST00000503010 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
TMED7-202ENST00000503010 PEG3Q9GZU2 1588 aa25.42■■□□□ 1.66
TMED7-202ENST00000503010 RSF1Q96T23 1441 aaPredicted RBP25.4■■□□□ 1.66
TMED7-202ENST00000503010 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
TMED7-202ENST00000503010 HMGXB3Q12766 1538 aa25.28■■□□□ 1.64
TMED7-202ENST00000503010 DNAJC5BQ9UF47 199 aa25.28■■□□□ 1.64
TMED7-202ENST00000503010 BAZ1BQ9UIG0 1483 aaKnown RBP25.26■■□□□ 1.63
TMED7-202ENST00000503010 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
TMED7-202ENST00000503010 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
TMED7-202ENST00000503010 SUPT5HO00267 1087 aaKnown RBP25.14■■□□□ 1.62
TMED7-202ENST00000503010 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
TMED7-202ENST00000503010 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
TMED7-202ENST00000503010 LAMC3Q9Y6N6 1575 aa24.63■■□□□ 1.53
TMED7-202ENST00000503010 NESP48681 1621 aa24.58■■□□□ 1.53
TMED7-202ENST00000503010 CADPSQ9ULU8 1353 aa24.5■■□□□ 1.51
TMED7-202ENST00000503010 CFTRP13569 1480 aa24.5■■□□□ 1.51
TMED7-202ENST00000503010 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
TMED7-202ENST00000503010 PPP4R3CPQ6ZMV5 832 aa24.45■■□□□ 1.5
TMED7-202ENST00000503010 ERCC6Q03468 1493 aa24.33■■□□□ 1.49
TMED7-202ENST00000503010 PDS5BQ9NTI5 1447 aa24.33■■□□□ 1.49
TMED7-202ENST00000503010 FANCD2Q9BXW9 1451 aa24.32■■□□□ 1.48
TMED7-202ENST00000503010 CEP164Q9UPV0 1460 aa24.29■■□□□ 1.48
TMED7-202ENST00000503010 SCAF1Q9H7N4 1312 aaKnown RBP24.27■■□□□ 1.48
TMED7-202ENST00000503010 THOC2Q8NI27 1593 aaKnown RBP24.22■■□□□ 1.47
TMED7-202ENST00000503010 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
TMED7-202ENST00000503010 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
TMED7-202ENST00000503010 MAPK8IP2Q13387 824 aaPredicted RBP24.1■■□□□ 1.45
TMED7-202ENST00000503010 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.45
TMED7-202ENST00000503010 WDR62O43379 1518 aa24.06■■□□□ 1.44
TMED7-202ENST00000503010 URB2Q14146 1524 aaKnown RBP24.06■■□□□ 1.44
TMED7-202ENST00000503010 BIVM-ERCC5R4GMW8 1640 aa24.05■■□□□ 1.44
TMED7-202ENST00000503010 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
TMED7-202ENST00000503010 CUX1P39880 1505 aa24.02■■□□□ 1.44
TMED7-202ENST00000503010 TOPBP1Q92547 1522 aa24■■□□□ 1.43
TMED7-202ENST00000503010 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
TMED7-202ENST00000503010 TOP2BQ02880 1626 aa23.99■■□□□ 1.43
TMED7-202ENST00000503010 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
TMED7-202ENST00000503010 CUX2O14529 1486 aa23.85■■□□□ 1.41
TMED7-202ENST00000503010 POLA1P09884 1462 aaPredicted RBP23.82■■□□□ 1.4
TMED7-202ENST00000503010 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
TMED7-202ENST00000503010 KCNA4P22459 653 aa23.8■■□□□ 1.4
TMED7-202ENST00000503010 NCBP3Q53F19 620 aaKnown RBP23.78■■□□□ 1.4
TMED7-202ENST00000503010 CNKSR2Q8WXI2 1034 aa23.77■■□□□ 1.4
TMED7-202ENST00000503010 DMRT2Q9Y5R5 561 aa23.76■■□□□ 1.39
TMED7-202ENST00000503010 TARBP1Q13395 1621 aaKnown RBP23.76■■□□□ 1.39
TMED7-202ENST00000503010 IFT140Q96RY7 1462 aa23.7■■□□□ 1.38
TMED7-202ENST00000503010 RAD54L2Q9Y4B4 1467 aa23.7■■□□□ 1.38
TMED7-202ENST00000503010 TRIM41Q8WV44 630 aa23.68■■□□□ 1.38
TMED7-202ENST00000503010 SOGA1O94964 1423 aa23.67■■□□□ 1.38
TMED7-202ENST00000503010 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
TMED7-202ENST00000503010 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
TMED7-202ENST00000503010 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
TMED7-202ENST00000503010 ABCA5Q8WWZ7 1642 aa23.6■■□□□ 1.37
TMED7-202ENST00000503010 ZNF608Q9ULD9 1512 aaPredicted RBP23.57■■□□□ 1.36
TMED7-202ENST00000503010 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
TMED7-202ENST00000503010 TDRD9Q8NDG6 1382 aaKnown RBP23.46■■□□□ 1.35
TMED7-202ENST00000503010 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.34
TMED7-202ENST00000503010 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
TMED7-202ENST00000503010 NPM3O75607 178 aaKnown RBP23.43■■□□□ 1.34
TMED7-202ENST00000503010 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.34
TMED7-202ENST00000503010 GRIN2BQ13224 1484 aa23.38■■□□□ 1.33
TMED7-202ENST00000503010 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
TMED7-202ENST00000503010 CUL7Q14999 1698 aa23.38■■□□□ 1.33
TMED7-202ENST00000503010 POTEDQ86YR6 584 aa23.37■■□□□ 1.33
TMED7-202ENST00000503010 SNAPC4Q5SXM2 1469 aa23.35■■□□□ 1.33
TMED7-202ENST00000503010 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
TMED7-202ENST00000503010 CHD1O14646 1710 aa23.33■■□□□ 1.33
TMED7-202ENST00000503010 RNF216Q9NWF9 866 aaPredicted RBP23.32■■□□□ 1.32
TMED7-202ENST00000503010 EEA1Q15075 1411 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms