RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 NISCHQ9Y2I1 1504 aa46.35■■■■■ 5.01
PCNX3-203ENST00000530174 CCDC180Q9P1Z9 1646 aa41.36■■■■■ 4.21
PCNX3-203ENST00000530174 ABCC9O60706 1549 aa40.82■■■■■ 4.12
PCNX3-203ENST00000530174 RB1CC1Q8TDY2 1594 aa39.09■■■■□ 3.85
PCNX3-203ENST00000530174 NACADO15069 1562 aa38.95■■■■□ 3.83
PCNX3-203ENST00000530174 DCAF8L2P0C7V8 631 aa38.86■■■■□ 3.81
PCNX3-203ENST00000530174 MYO15BQ96JP2 1530 aa38.6■■■■□ 3.77
PCNX3-203ENST00000530174 ZCCHC6Q5VYS8 1495 aaKnown RBP38.55■■■■□ 3.76
PCNX3-203ENST00000530174 DCAF1Q9Y4B6 1507 aa38.32■■■■□ 3.72
PCNX3-203ENST00000530174 UNC13AQ9UPW8 1703 aa38.22■■■■□ 3.71
PCNX3-203ENST00000530174 PABPN1Q86U42 306 aaKnown RBP eCLIP38.08■■■■□ 3.69
PCNX3-203ENST00000530174 BICRAQ9NZM4 1560 aa37.94■■■■□ 3.66
PCNX3-203ENST00000530174 DNAJC5BQ9UF47 199 aa37.77■■■■□ 3.64
PCNX3-203ENST00000530174 SCRIBQ14160 1630 aa37.73■■■■□ 3.63
PCNX3-203ENST00000530174 SHROOM4Q9ULL8 1493 aa37.48■■■■□ 3.59
PCNX3-203ENST00000530174 EIF4G1Q04637 1599 aaKnown RBP36.96■■■■□ 3.51
PCNX3-203ENST00000530174 CC2D2AQ9P2K1 1620 aa36.89■■■■□ 3.5
PCNX3-203ENST00000530174 CECR2Q9BXF3 1484 aa36.7■■■■□ 3.47
PCNX3-203ENST00000530174 SMARCA4P51532 1647 aa36.05■■■■□ 3.36
PCNX3-203ENST00000530174 NCAPD3P42695 1498 aa35.95■■■■□ 3.35
PCNX3-203ENST00000530174 BAZ1AQ9NRL2 1556 aaPredicted RBP35.94■■■■□ 3.34
PCNX3-203ENST00000530174 ATAD2BQ9ULI0 1458 aa35.93■■■■□ 3.34
PCNX3-203ENST00000530174 SMARCA2P51531 1590 aa35.86■■■■□ 3.33
PCNX3-203ENST00000530174 HMGXB3Q12766 1538 aa35.75■■■■□ 3.31
PCNX3-203ENST00000530174 MROH2BQ7Z745 1585 aa35.73■■■■□ 3.31
PCNX3-203ENST00000530174 PEG3Q9GZU2 1588 aa35.69■■■■□ 3.3
PCNX3-203ENST00000530174 BAZ1BQ9UIG0 1483 aaKnown RBP35.61■■■■□ 3.29
PCNX3-203ENST00000530174 WIZO95785 1651 aa35.33■■■■□ 3.25
PCNX3-203ENST00000530174 NESP48681 1621 aa35.22■■■■□ 3.23
PCNX3-203ENST00000530174 ERCC6Q03468 1493 aa35.2■■■■□ 3.23
PCNX3-203ENST00000530174 RSF1Q96T23 1441 aaPredicted RBP35.19■■■■□ 3.22
PCNX3-203ENST00000530174 LAMC3Q9Y6N6 1575 aa35.06■■■■□ 3.2
PCNX3-203ENST00000530174 TOP2AP11388 1531 aaKnown RBP34.93■■■■□ 3.18
PCNX3-203ENST00000530174 CUX2O14529 1486 aa34.93■■■■□ 3.18
PCNX3-203ENST00000530174 CADPSQ9ULU8 1353 aa34.88■■■■□ 3.17
PCNX3-203ENST00000530174 PDS5BQ9NTI5 1447 aa34.83■■■■□ 3.17
PCNX3-203ENST00000530174 KIF21AQ7Z4S6 1674 aa34.79■■■■□ 3.16
PCNX3-203ENST00000530174 THOC2Q8NI27 1593 aaKnown RBP34.76■■■■□ 3.16
PCNX3-203ENST00000530174 CFTRP13569 1480 aa34.61■■■■□ 3.13
PCNX3-203ENST00000530174 CCDC88BA6NC98 1476 aa34.52■■■■□ 3.12
PCNX3-203ENST00000530174 MRC2Q9UBG0 1479 aa34.52■■■■□ 3.12
PCNX3-203ENST00000530174 FANCD2Q9BXW9 1451 aa34.5■■■■□ 3.11
PCNX3-203ENST00000530174 CEP164Q9UPV0 1460 aa34.49■■■■□ 3.11
PCNX3-203ENST00000530174 WDR62O43379 1518 aa34.41■■■■□ 3.1
PCNX3-203ENST00000530174 PRDM2Q13029 1718 aa34.33■■■■□ 3.09
PCNX3-203ENST00000530174 DNAJC5Q9H3Z4 198 aa34.25■■■■□ 3.07
PCNX3-203ENST00000530174 URB2Q14146 1524 aaKnown RBP34.19■■■■□ 3.06
PCNX3-203ENST00000530174 SUPT5HO00267 1087 aaKnown RBP34.04■■■■□ 3.04
PCNX3-203ENST00000530174 TOPBP1Q92547 1522 aa33.92■■■■□ 3.02
PCNX3-203ENST00000530174 ABCC8Q09428 1581 aa33.86■■■■□ 3.01
PCNX3-203ENST00000530174 DNMBPQ6XZF7 1577 aa33.85■■■■□ 3.01
PCNX3-203ENST00000530174 IFT140Q96RY7 1462 aa33.77■■■■□ 3
PCNX3-203ENST00000530174 ZNF608Q9ULD9 1512 aaPredicted RBP33.68■■■□□ 2.98
PCNX3-203ENST00000530174 POLA1P09884 1462 aaPredicted RBP33.61■■■□□ 2.97
PCNX3-203ENST00000530174 TARBP1Q13395 1621 aaKnown RBP33.57■■■□□ 2.97
PCNX3-203ENST00000530174 CUX1P39880 1505 aa33.54■■■□□ 2.96
PCNX3-203ENST00000530174 EIF4G3O43432 1585 aaKnown RBP33.53■■■□□ 2.96
PCNX3-203ENST00000530174 FGD5Q6ZNL6 1462 aa33.48■■■□□ 2.95
PCNX3-203ENST00000530174 RAD54L2Q9Y4B4 1467 aa33.47■■■□□ 2.95
PCNX3-203ENST00000530174 SOGA1O94964 1423 aa33.45■■■□□ 2.94
PCNX3-203ENST00000530174 AQRO60306 1485 aaKnown RBP eCLIP33.44■■■□□ 2.949e-10■■■■■ 34
PCNX3-203ENST00000530174 OSCARQ8IYS5 282 aa33.41■■■□□ 2.94
PCNX3-203ENST00000530174 TDRD9Q8NDG6 1382 aaKnown RBP33.32■■■□□ 2.92
PCNX3-203ENST00000530174 WDR97A6NE52 1622 aa33.26■■■□□ 2.91
PCNX3-203ENST00000530174 WRNQ14191 1432 aaPredicted RBP eCLIP33.19■■■□□ 2.9
PCNX3-203ENST00000530174 CHD1O14646 1710 aa33.16■■■□□ 2.9
PCNX3-203ENST00000530174 TOP2BQ02880 1626 aa33.15■■■□□ 2.9
PCNX3-203ENST00000530174 BIVM-ERCC5R4GMW8 1640 aa33.15■■■□□ 2.9
PCNX3-203ENST00000530174 SYNJ1O43426 1573 aa33.14■■■□□ 2.9
PCNX3-203ENST00000530174 ABCA10Q8WWZ4 1543 aa33.12■■■□□ 2.89
PCNX3-203ENST00000530174 SNAPC4Q5SXM2 1469 aa33.12■■■□□ 2.89
PCNX3-203ENST00000530174 GRIN2BQ13224 1484 aa33.1■■■□□ 2.89
PCNX3-203ENST00000530174 FBLN2P98095 1184 aa33.09■■■□□ 2.89
PCNX3-203ENST00000530174 GAPVD1Q14C86 1478 aa33.05■■■□□ 2.88
PCNX3-203ENST00000530174 MAGI1Q96QZ7 1491 aaPredicted RBP33.05■■■□□ 2.88
PCNX3-203ENST00000530174 ABCA5Q8WWZ7 1642 aa33.04■■■□□ 2.88
PCNX3-203ENST00000530174 PBRM1Q86U86 1689 aa33.03■■■□□ 2.88
PCNX3-203ENST00000530174 TRIM41Q8WV44 630 aa33■■■□□ 2.87
PCNX3-203ENST00000530174 RIMBP3CA6NJZ7 1639 aa32.95■■■□□ 2.87
PCNX3-203ENST00000530174 RIMBP3BA6NNM3 1639 aa32.95■■■□□ 2.87
PCNX3-203ENST00000530174 RIMBP3Q9UFD9 1639 aa32.95■■■□□ 2.87
PCNX3-203ENST00000530174 CHMP7Q8WUX9 453 aaPredicted RBP32.93■■■□□ 2.86
PCNX3-203ENST00000530174 SYNJ2O15056 1496 aa32.93■■■□□ 2.86
PCNX3-203ENST00000530174 ARHGEF11O15085 1522 aa32.91■■■□□ 2.86
PCNX3-203ENST00000530174 CLASP1Q7Z460 1538 aa32.8■■■□□ 2.84
PCNX3-203ENST00000530174 ADAMTS12P58397 1594 aa32.75■■■□□ 2.83
PCNX3-203ENST00000530174 ERICH3Q5RHP9 1530 aa32.72■■■□□ 2.83
PCNX3-203ENST00000530174 GRIN2AQ12879 1464 aa32.69■■■□□ 2.82
PCNX3-203ENST00000530174 FHAD1B1AJZ9 1412 aa32.67■■■□□ 2.82
PCNX3-203ENST00000530174 ARAP1Q96P48 1450 aa32.62■■■□□ 2.81
PCNX3-203ENST00000530174 CYB5RLQ6IPT4 315 aa32.6■■■□□ 2.81
PCNX3-203ENST00000530174 CEP170Q5SW79 1584 aa32.55■■■□□ 2.8
PCNX3-203ENST00000530174 NUP160Q12769 1436 aa32.55■■■□□ 2.8
PCNX3-203ENST00000530174 KIF27Q86VH2 1401 aa32.51■■■□□ 2.8
PCNX3-203ENST00000530174 IGF1RP08069 1367 aa32.43■■■□□ 2.78
PCNX3-203ENST00000530174 CUL7Q14999 1698 aa32.36■■■□□ 2.77
PCNX3-203ENST00000530174 SHROOM2Q13796 1616 aa32.35■■■□□ 2.77
PCNX3-203ENST00000530174 ERCC6L2Q5T890 1561 aa32.34■■■□□ 2.77
PCNX3-203ENST00000530174 RUSC2Q8N2Y8 1516 aa32.28■■■□□ 2.76
PCNX3-203ENST00000530174 CARMIL1Q5VZK9 1371 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms