RNA–Protein interactions for RNA: ENST00000289893.8

MACF1-201, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5 BASIC

Gene MACF1, Length 19,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-201ENST00000289893 MYT1Q01538 1121 aa6.02□□□□□ -1.45
MACF1-201ENST00000289893 PELP1Q8IZL8 1130 aaKnown RBP5.93□□□□□ -1.46
MACF1-201ENST00000289893 NISCHQ9Y2I1 1504 aa5.92□□□□□ -1.46
MACF1-201ENST00000289893 DCAF8L2P0C7V8 631 aa5.88□□□□□ -1.47
MACF1-201ENST00000289893 SUPT5HO00267 1087 aaKnown RBP5.64□□□□□ -1.51
MACF1-201ENST00000289893 EHMT2Q96KQ7 1210 aa5.64□□□□□ -1.51
MACF1-201ENST00000289893 TTBK1Q5TCY1 1321 aaPredicted RBP5.58□□□□□ -1.52
MACF1-201ENST00000289893 SHROOM4Q9ULL8 1493 aa5.58□□□□□ -1.52
MACF1-201ENST00000289893 ERICH6Q7L0X2 663 aa5.57□□□□□ -1.52
MACF1-201ENST00000289893 APLP2Q06481 763 aa5.48□□□□□ -1.53
MACF1-201ENST00000289893 CCER1Q8TC90 406 aaPredicted RBP5.47□□□□□ -1.53
MACF1-201ENST00000289893 CENPBP07199 599 aaPredicted RBP5.43□□□□□ -1.54
MACF1-201ENST00000289893 YTHDC1Q96MU7 727 aaKnown RBP5.41□□□□□ -1.54
MACF1-201ENST00000289893 PCGF6Q9BYE7 350 aa5.4□□□□□ -1.55
MACF1-201ENST00000289893 FAM9AQ8IZU1 332 aaPredicted RBP5.38□□□□□ -1.55
MACF1-201ENST00000289893 NEFLP07196 543 aa5.38□□□□□ -1.55
MACF1-201ENST00000289893 RANGAP1P46060 587 aaPredicted RBP5.32□□□□□ -1.56
MACF1-201ENST00000289893 ATP1B4Q9UN42 357 aaPredicted RBP5.28□□□□□ -1.56
MACF1-201ENST00000289893 ZEB1P37275 1124 aaPredicted RBP5.27□□□□□ -1.57
MACF1-201ENST00000289893 DAXXQ9UER7 740 aaPredicted RBP5.25□□□□□ -1.57
MACF1-201ENST00000289893 POLR3GLQ9BT43 218 aa5.19□□□□□ -1.58
MACF1-201ENST00000289893 GLIPR1L2Q4G1C9 344 aa5.18□□□□□ -1.58
MACF1-201ENST00000289893 UBTFP17480 764 aaKnown RBP5.17□□□□□ -1.58
MACF1-201ENST00000289893 PPARGC1BQ86YN6 1023 aaKnown RBP5.16□□□□□ -1.58
MACF1-201ENST00000289893 CNGB1Q14028 1251 aaPredicted RBP5.16□□□□□ -1.58
MACF1-201ENST00000289893 TRIM41Q8WV44 630 aa5.16□□□□□ -1.58
MACF1-201ENST00000289893 RTL5Q5HYW3 569 aaPredicted RBP5.16□□□□□ -1.58
MACF1-201ENST00000289893 ZNF316A6NFI3 1004 aaPredicted RBP5.14□□□□□ -1.59
MACF1-201ENST00000289893 CLSPNQ9HAW4 1339 aa5.12□□□□□ -1.59
MACF1-201ENST00000289893 ITGAEP38570 1179 aa5.1□□□□□ -1.59
MACF1-201ENST00000289893 MYT1LQ9UL68 1186 aa5.1□□□□□ -1.59
MACF1-201ENST00000289893 CHIC1Q5VXU3 224 aa5.08□□□□□ -1.6
MACF1-201ENST00000289893 SLC4A1APQ9BWU0 796 aaKnown RBP5.08□□□□□ -1.6
MACF1-201ENST00000289893 HRCP23327 699 aa5.06□□□□□ -1.6
MACF1-201ENST00000289893 TRIM26Q12899 539 aaPredicted RBP5.05□□□□□ -1.6
MACF1-201ENST00000289893 BCANQ96GW7 911 aa5.04□□□□□ -1.6
MACF1-201ENST00000289893 HNRNPUL2Q1KMD3 747 aaKnown RBP5.04□□□□□ -1.6
MACF1-201ENST00000289893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.03□□□□□ -1.6
MACF1-201ENST00000289893 EIF5BO60841 1220 aaKnown RBP5.03□□□□□ -1.6
MACF1-201ENST00000289893 BCL11AQ9H165 835 aa5.01□□□□□ -1.61
MACF1-201ENST00000289893 DIEXFQ68CQ4 756 aaKnown RBP4.98□□□□□ -1.61
MACF1-201ENST00000289893 DCAF1Q9Y4B6 1507 aa4.98□□□□□ -1.61
MACF1-201ENST00000289893 SLC24A1O60721 1099 aa4.97□□□□□ -1.61
MACF1-201ENST00000289893 MYO15BQ96JP2 1530 aa4.97□□□□□ -1.61
MACF1-201ENST00000289893 ZBTB47Q9UFB7 747 aaPredicted RBP4.96□□□□□ -1.62
MACF1-201ENST00000289893 CANXP27824 592 aaKnown RBP4.95□□□□□ -1.62
MACF1-201ENST00000289893 GTF3C3Q9Y5Q9 886 aa4.95□□□□□ -1.62
MACF1-201ENST00000289893 CDK11AQ9UQ88 783 aaPredicted RBP4.94□□□□□ -1.62
MACF1-201ENST00000289893 ZNF326Q5BKZ1 582 aaKnown RBP4.94□□□□□ -1.62
MACF1-201ENST00000289893 ZCCHC6Q5VYS8 1495 aaKnown RBP4.94□□□□□ -1.62
MACF1-201ENST00000289893 NPM2Q86SE8 214 aaKnown RBP4.93□□□□□ -1.62
MACF1-201ENST00000289893 FAM50AQ14320 339 aaKnown RBP4.93□□□□□ -1.62
MACF1-201ENST00000289893 ANP32AP39687 249 aaKnown RBP4.92□□□□□ -1.62
MACF1-201ENST00000289893 LOC105371045A0A1W2PR82 267 aa4.9□□□□□ -1.62
MACF1-201ENST00000289893 TNNT2P45379 298 aaPredicted RBP4.9□□□□□ -1.62
MACF1-201ENST00000289893 NEUROD1Q13562 356 aa4.9□□□□□ -1.63
MACF1-201ENST00000289893 TRIM52Q96A61 297 aa4.89□□□□□ -1.63
MACF1-201ENST00000289893 ARXQ96QS3 562 aa4.88□□□□□ -1.63
MACF1-201ENST00000289893 ANP32CO43423 234 aa4.87□□□□□ -1.63
MACF1-201ENST00000289893 ACIN1Q9UKV3 1341 aaKnown RBP4.87□□□□□ -1.63
MACF1-201ENST00000289893 ANP32BQ92688 251 aaKnown RBP4.86□□□□□ -1.63
MACF1-201ENST00000289893 NCLP19338 710 aaKnown RBP4.86□□□□□ -1.63
MACF1-201ENST00000289893 SCRIBQ14160 1630 aa4.86□□□□□ -1.63
MACF1-201ENST00000289893 HSP90AA1P07900 732 aaKnown RBP4.85□□□□□ -1.63
MACF1-201ENST00000289893 CCDC180Q9P1Z9 1646 aa4.85□□□□□ -1.63
MACF1-201ENST00000289893 NEFMP07197 916 aa4.84□□□□□ -1.63
MACF1-201ENST00000289893 CSRNP3Q8WYN3 585 aa4.83□□□□□ -1.64
MACF1-201ENST00000289893 NBR1Q14596 966 aa4.82□□□□□ -1.64
MACF1-201ENST00000289893 ANP32EQ9BTT0 268 aa4.81□□□□□ -1.64
MACF1-201ENST00000289893 UPF2Q9HAU5 1272 aaKnown RBP4.8□□□□□ -1.64
MACF1-201ENST00000289893 FKBP8Q14318 412 aa4.8□□□□□ -1.64
MACF1-201ENST00000289893 RSF1Q96T23 1441 aaPredicted RBP4.79□□□□□ -1.64
MACF1-201ENST00000289893 TRIM44Q96DX7 344 aaPredicted RBP4.79□□□□□ -1.64
MACF1-201ENST00000289893 CDK11BP21127 795 aaKnown RBP4.79□□□□□ -1.64
MACF1-201ENST00000289893 KAT6BQ8WYB5 2073 aa4.79□□□□□ -1.64
MACF1-201ENST00000289893 ABCC9O60706 1549 aa4.78□□□□□ -1.64
MACF1-201ENST00000289893 EEA1Q15075 1411 aa4.78□□□□□ -1.64
MACF1-201ENST00000289893 NACADO15069 1562 aa4.78□□□□□ -1.64
MACF1-201ENST00000289893 ERICH6BQ5W0A0 696 aa4.78□□□□□ -1.64
MACF1-201ENST00000289893 HNRNPUQ00839 825 aaKnown RBP eCLIP4.77□□□□□ -1.65
MACF1-201ENST00000289893 TONSLQ96HA7 1378 aa4.77□□□□□ -1.65
MACF1-201ENST00000289893 ARID3CA6NKF2 412 aa4.76□□□□□ -1.65
MACF1-201ENST00000289893 PABPN1Q86U42 306 aaKnown RBP eCLIP4.75□□□□□ -1.65
MACF1-201ENST00000289893 SALL2Q9Y467 1007 aaPredicted RBP4.75□□□□□ -1.65
MACF1-201ENST00000289893 PTMSP20962 102 aa4.74□□□□□ -1.65
MACF1-201ENST00000289893 FAM9BQ8IZU0 186 aa4.74□□□□□ -1.65
MACF1-201ENST00000289893 IRX6P78412 446 aaPredicted RBP4.74□□□□□ -1.65
MACF1-201ENST00000289893 CCDC136Q96JN2 1154 aa4.74□□□□□ -1.65
MACF1-201ENST00000289893 PLPPR3Q6T4P5 718 aa4.72□□□□□ -1.65
MACF1-201ENST00000289893 FBLN2P98095 1184 aa4.72□□□□□ -1.65
MACF1-201ENST00000289893 ZNF777Q9ULD5 760 aaPredicted RBP4.72□□□□□ -1.65
MACF1-201ENST00000289893 SCAF1Q9H7N4 1312 aaKnown RBP4.72□□□□□ -1.65
MACF1-201ENST00000289893 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.72□□□□□ -1.65
MACF1-201ENST00000289893 AMER1Q5JTC6 1135 aaPredicted RBP4.71□□□□□ -1.66
MACF1-201ENST00000289893 RTN4Q9NQC3 1192 aaKnown RBP4.7□□□□□ -1.66
MACF1-201ENST00000289893 TPRNQ4KMQ1 711 aa4.7□□□□□ -1.66
MACF1-201ENST00000289893 A0A0G2JS52 829 aa4.7□□□□□ -1.66
MACF1-201ENST00000289893 P3H3Q8IVL6 736 aa4.7□□□□□ -1.66
MACF1-201ENST00000289893 TIMELESSQ9UNS1 1208 aa4.7□□□□□ -1.66
MACF1-201ENST00000289893 DNTTIP2Q5QJE6 756 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms