RNA–Protein interactions for RNA: ENST00000372925.6

MACF1-205, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 14,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-205ENST00000372925 PELP1Q8IZL8 1130 aaKnown RBP9.54□□□□□ -0.88
MACF1-205ENST00000372925 DCAF8L2P0C7V8 631 aa9.53□□□□□ -0.88
MACF1-205ENST00000372925 NISCHQ9Y2I1 1504 aa9.3□□□□□ -0.92
MACF1-205ENST00000372925 FAM9AQ8IZU1 332 aaPredicted RBP9.15□□□□□ -0.94
MACF1-205ENST00000372925 ERICH6Q7L0X2 663 aa9.14□□□□□ -0.95
MACF1-205ENST00000372925 APLP2Q06481 763 aa9.11□□□□□ -0.95
MACF1-205ENST00000372925 SUPT5HO00267 1087 aaKnown RBP9.11□□□□□ -0.95
MACF1-205ENST00000372925 CCER1Q8TC90 406 aaPredicted RBP9.08□□□□□ -0.96
MACF1-205ENST00000372925 MYT1Q01538 1121 aa9.07□□□□□ -0.96
MACF1-205ENST00000372925 ZEB1P37275 1124 aaPredicted RBP9□□□□□ -0.97
MACF1-205ENST00000372925 CENPBP07199 599 aaPredicted RBP8.95□□□□□ -0.98
MACF1-205ENST00000372925 SHROOM4Q9ULL8 1493 aa8.82□□□□□ -1
MACF1-205ENST00000372925 NEFLP07196 543 aa8.75□□□□□ -1.01
MACF1-205ENST00000372925 YTHDC1Q96MU7 727 aaKnown RBP8.75□□□□□ -1.01
MACF1-205ENST00000372925 PCGF6Q9BYE7 350 aa8.67□□□□□ -1.02
MACF1-205ENST00000372925 EHMT2Q96KQ7 1210 aa8.65□□□□□ -1.02
MACF1-205ENST00000372925 DAXXQ9UER7 740 aaPredicted RBP8.65□□□□□ -1.02
MACF1-205ENST00000372925 TRIM41Q8WV44 630 aa8.63□□□□□ -1.03
MACF1-205ENST00000372925 UBTFP17480 764 aaKnown RBP8.53□□□□□ -1.04
MACF1-205ENST00000372925 TTBK1Q5TCY1 1321 aaPredicted RBP8.5□□□□□ -1.05
MACF1-205ENST00000372925 TRIM26Q12899 539 aaPredicted RBP8.49□□□□□ -1.05
MACF1-205ENST00000372925 ATP1B4Q9UN42 357 aaPredicted RBP8.47□□□□□ -1.05
MACF1-205ENST00000372925 ZNF316A6NFI3 1004 aaPredicted RBP8.38□□□□□ -1.07
MACF1-205ENST00000372925 RTL5Q5HYW3 569 aaPredicted RBP8.36□□□□□ -1.07
MACF1-205ENST00000372925 RANGAP1P46060 587 aaPredicted RBP8.35□□□□□ -1.07
MACF1-205ENST00000372925 HRCP23327 699 aa8.3□□□□□ -1.08
MACF1-205ENST00000372925 CLSPNQ9HAW4 1339 aa8.26□□□□□ -1.09
MACF1-205ENST00000372925 MYT1LQ9UL68 1186 aa8.22□□□□□ -1.09
MACF1-205ENST00000372925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.2□□□□□ -1.1
MACF1-205ENST00000372925 HNRNPUL2Q1KMD3 747 aaKnown RBP8.2□□□□□ -1.1
MACF1-205ENST00000372925 ZBTB47Q9UFB7 747 aaPredicted RBP8.18□□□□□ -1.1
MACF1-205ENST00000372925 DIEXFQ68CQ4 756 aaKnown RBP8.18□□□□□ -1.1
MACF1-205ENST00000372925 POLR3GLQ9BT43 218 aa8.18□□□□□ -1.1
MACF1-205ENST00000372925 SLC4A1APQ9BWU0 796 aaKnown RBP8.17□□□□□ -1.1
MACF1-205ENST00000372925 CDK11AQ9UQ88 783 aaPredicted RBP8.14□□□□□ -1.11
MACF1-205ENST00000372925 ANP32CO43423 234 aa8.13□□□□□ -1.11
MACF1-205ENST00000372925 NEFMP07197 916 aa8.12□□□□□ -1.11
MACF1-205ENST00000372925 ITGAEP38570 1179 aa8.12□□□□□ -1.11
MACF1-205ENST00000372925 CNGB1Q14028 1251 aaPredicted RBP8.09□□□□□ -1.11
MACF1-205ENST00000372925 ANP32BQ92688 251 aaKnown RBP8.09□□□□□ -1.11
MACF1-205ENST00000372925 GLIPR1L2Q4G1C9 344 aa8.08□□□□□ -1.12
MACF1-205ENST00000372925 CHIC1Q5VXU3 224 aa8.08□□□□□ -1.12
MACF1-205ENST00000372925 EIF5BO60841 1220 aaKnown RBP8.06□□□□□ -1.12
MACF1-205ENST00000372925 ANP32AP39687 249 aaKnown RBP8.06□□□□□ -1.12
MACF1-205ENST00000372925 PPARGC1BQ86YN6 1023 aaKnown RBP8.04□□□□□ -1.12
MACF1-205ENST00000372925 FAM50AQ14320 339 aaKnown RBP8.03□□□□□ -1.12
MACF1-205ENST00000372925 ACIN1Q9UKV3 1341 aaKnown RBP8.03□□□□□ -1.12
MACF1-205ENST00000372925 SLC24A1O60721 1099 aa8.01□□□□□ -1.13
MACF1-205ENST00000372925 TRIM52Q96A61 297 aa8.01□□□□□ -1.13
MACF1-205ENST00000372925 CANXP27824 592 aaKnown RBP8.01□□□□□ -1.13
MACF1-205ENST00000372925 UPF2Q9HAU5 1272 aaKnown RBP8□□□□□ -1.13
MACF1-205ENST00000372925 BCL11AQ9H165 835 aa7.99□□□□□ -1.13
MACF1-205ENST00000372925 CDK11BP21127 795 aaKnown RBP7.97□□□□□ -1.13
MACF1-205ENST00000372925 LOC105371045A0A1W2PR82 267 aa7.97□□□□□ -1.13
MACF1-205ENST00000372925 GTF3C3Q9Y5Q9 886 aa7.93□□□□□ -1.14
MACF1-205ENST00000372925 HSP90AA1P07900 732 aaKnown RBP7.93□□□□□ -1.14
MACF1-205ENST00000372925 ANP32EQ9BTT0 268 aa7.93□□□□□ -1.14
MACF1-205ENST00000372925 NEUROD1Q13562 356 aa7.92□□□□□ -1.14
MACF1-205ENST00000372925 CCDC180Q9P1Z9 1646 aa7.91□□□□□ -1.14
MACF1-205ENST00000372925 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.91□□□□□ -1.14
MACF1-205ENST00000372925 DCAF1Q9Y4B6 1507 aa7.88□□□□□ -1.15
MACF1-205ENST00000372925 TONSLQ96HA7 1378 aa7.86□□□□□ -1.15
MACF1-205ENST00000372925 ZNF326Q5BKZ1 582 aaKnown RBP7.84□□□□□ -1.15
MACF1-205ENST00000372925 TNNT2P45379 298 aaPredicted RBP7.83□□□□□ -1.16
MACF1-205ENST00000372925 ESF1Q9H501 851 aaKnown RBP7.82□□□□□ -1.16
MACF1-205ENST00000372925 CSRNP3Q8WYN3 585 aa7.81□□□□□ -1.16
MACF1-205ENST00000372925 BCANQ96GW7 911 aa7.8□□□□□ -1.16
MACF1-205ENST00000372925 MYH16Q9H6N6 1097 aa7.8□□□□□ -1.16
MACF1-205ENST00000372925 DDRGK1Q96HY6 314 aa7.8□□□□□ -1.16
MACF1-205ENST00000372925 BECN1Q14457 450 aa7.79□□□□□ -1.16
MACF1-205ENST00000372925 GOLGA6L22H0YM25 854 aa7.77□□□□□ -1.17
MACF1-205ENST00000372925 NPM2Q86SE8 214 aaKnown RBP7.76□□□□□ -1.17
MACF1-205ENST00000372925 TMC1Q8TDI8 760 aa7.76□□□□□ -1.17
MACF1-205ENST00000372925 CCDC136Q96JN2 1154 aa7.76□□□□□ -1.17
MACF1-205ENST00000372925 ABCC9O60706 1549 aa7.76□□□□□ -1.17
MACF1-205ENST00000372925 EEA1Q15075 1411 aa7.75□□□□□ -1.17
MACF1-205ENST00000372925 WDR43Q15061 677 aaKnown RBP eCLIP7.75□□□□□ -1.173e-6■■□□□ 14.2
MACF1-205ENST00000372925 FBLN2P98095 1184 aa7.74□□□□□ -1.17
MACF1-205ENST00000372925 STAG3Q9UJ98 1225 aa7.74□□□□□ -1.17
MACF1-205ENST00000372925 CHMP4BQ9H444 224 aaKnown RBP7.73□□□□□ -1.17
MACF1-205ENST00000372925 NCLP19338 710 aaKnown RBP7.73□□□□□ -1.17
MACF1-205ENST00000372925 HNRNPUQ00839 825 aaKnown RBP eCLIP7.73□□□□□ -1.17
MACF1-205ENST00000372925 CDCA8Q53HL2 280 aa7.73□□□□□ -1.17
MACF1-205ENST00000372925 TRIM44Q96DX7 344 aaPredicted RBP7.72□□□□□ -1.17
MACF1-205ENST00000372925 TULP1O00294 542 aaPredicted RBP7.72□□□□□ -1.17
MACF1-205ENST00000372925 CASC1Q6TDU7 716 aa7.72□□□□□ -1.17
MACF1-205ENST00000372925 FKBP8Q14318 412 aa7.72□□□□□ -1.17
MACF1-205ENST00000372925 RSF1Q96T23 1441 aaPredicted RBP7.72□□□□□ -1.17
MACF1-205ENST00000372925 ARXQ96QS3 562 aa7.72□□□□□ -1.17
MACF1-205ENST00000372925 NPM1P06748 294 aaKnown RBP eCLIP7.71□□□□□ -1.18
MACF1-205ENST00000372925 SCRIBQ14160 1630 aa7.7□□□□□ -1.18
MACF1-205ENST00000372925 TSPY4P0CV99 314 aa7.69□□□□□ -1.18
MACF1-205ENST00000372925 TSPY10P0CW01 314 aa7.69□□□□□ -1.18
MACF1-205ENST00000372925 ZCCHC6Q5VYS8 1495 aaKnown RBP7.69□□□□□ -1.18
MACF1-205ENST00000372925 CFAP44Q96MT7 982 aa7.69□□□□□ -1.18
MACF1-205ENST00000372925 NCBP3Q53F19 620 aaKnown RBP7.68□□□□□ -1.18
MACF1-205ENST00000372925 ZNF777Q9ULD5 760 aaPredicted RBP7.68□□□□□ -1.18
MACF1-205ENST00000372925 ZRSR1Q15695 479 aaKnown RBP7.68□□□□□ -1.18
MACF1-205ENST00000372925 PABPN1Q86U42 306 aaKnown RBP eCLIP7.67□□□□□ -1.18
MACF1-205ENST00000372925 MTUS2Q5JR59 1369 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms