RNA–Protein interactions for RNA: ENST00000456936.3

TMED7-201, Transcript of transmembrane p24 trafficking protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED7, Length 3,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED7-201ENST00000456936 NISCHQ9Y2I1 1504 aa28.73■■■□□ 2.19
TMED7-201ENST00000456936 CCDC180Q9P1Z9 1646 aa24.8■■□□□ 1.56
TMED7-201ENST00000456936 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
TMED7-201ENST00000456936 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
TMED7-201ENST00000456936 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
TMED7-201ENST00000456936 ABCC9O60706 1549 aa23.99■■□□□ 1.43
TMED7-201ENST00000456936 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
TMED7-201ENST00000456936 DCAF1Q9Y4B6 1507 aa23.52■■□□□ 1.36
TMED7-201ENST00000456936 NACADO15069 1562 aa23.25■■□□□ 1.31
TMED7-201ENST00000456936 MYO15BQ96JP2 1530 aa23.19■■□□□ 1.3
TMED7-201ENST00000456936 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
TMED7-201ENST00000456936 RB1CC1Q8TDY2 1594 aa23.12■■□□□ 1.29
TMED7-201ENST00000456936 PABPN1Q86U42 306 aaKnown RBP eCLIP22.81■■□□□ 1.24
TMED7-201ENST00000456936 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
TMED7-201ENST00000456936 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
TMED7-201ENST00000456936 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.18
TMED7-201ENST00000456936 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
TMED7-201ENST00000456936 BICRAQ9NZM4 1560 aa22.31■■□□□ 1.16
TMED7-201ENST00000456936 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
TMED7-201ENST00000456936 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
TMED7-201ENST00000456936 LOC105371045A0A1W2PR82 267 aa22.16■■□□□ 1.14
TMED7-201ENST00000456936 WIZO95785 1651 aa22.07■■□□□ 1.12
TMED7-201ENST00000456936 SMARCA4P51532 1647 aa22.05■■□□□ 1.12
TMED7-201ENST00000456936 EHMT2Q96KQ7 1210 aa21.99■■□□□ 1.11
TMED7-201ENST00000456936 FAM9AQ8IZU1 332 aaPredicted RBP21.99■■□□□ 1.11
TMED7-201ENST00000456936 TRIM41Q8WV44 630 aa21.95■■□□□ 1.1
TMED7-201ENST00000456936 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.08
TMED7-201ENST00000456936 EIF4G1Q04637 1599 aaKnown RBP21.76■■□□□ 1.07
TMED7-201ENST00000456936 TOP2AP11388 1531 aaKnown RBP21.76■■□□□ 1.07
TMED7-201ENST00000456936 BAZ1BQ9UIG0 1483 aaKnown RBP21.75■■□□□ 1.07
TMED7-201ENST00000456936 PCGF6Q9BYE7 350 aa21.74■■□□□ 1.07
TMED7-201ENST00000456936 SMARCA2P51531 1590 aa21.71■■□□□ 1.07
TMED7-201ENST00000456936 CCDC88BA6NC98 1476 aa21.67■■□□□ 1.06
TMED7-201ENST00000456936 PEG3Q9GZU2 1588 aa21.59■■□□□ 1.05
TMED7-201ENST00000456936 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
TMED7-201ENST00000456936 ABCC8Q09428 1581 aa21.47■■□□□ 1.03
TMED7-201ENST00000456936 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
TMED7-201ENST00000456936 HMGXB3Q12766 1538 aa21.39■■□□□ 1.02
TMED7-201ENST00000456936 PPARGC1BQ86YN6 1023 aaKnown RBP21.35■■□□□ 1.01
TMED7-201ENST00000456936 HRCP23327 699 aa21.28■■□□□ 1
TMED7-201ENST00000456936 TRIM26Q12899 539 aaPredicted RBP21.2■□□□□ 0.98
TMED7-201ENST00000456936 DNAJC5BQ9UF47 199 aa21.2■□□□□ 0.98
TMED7-201ENST00000456936 SOGA1O94964 1423 aa21.19■□□□□ 0.98
TMED7-201ENST00000456936 WRNQ14191 1432 aaPredicted RBP eCLIP21.17■□□□□ 0.98
TMED7-201ENST00000456936 TTBK1Q5TCY1 1321 aaPredicted RBP21.14■□□□□ 0.98
TMED7-201ENST00000456936 RUSC2Q8N2Y8 1516 aa21.14■□□□□ 0.97
TMED7-201ENST00000456936 CADPSQ9ULU8 1353 aa21.12■□□□□ 0.97
TMED7-201ENST00000456936 CFTRP13569 1480 aa21.07■□□□□ 0.96
TMED7-201ENST00000456936 UBTFP17480 764 aaKnown RBP21.04■□□□□ 0.96
TMED7-201ENST00000456936 CSRNP3Q8WYN3 585 aa21■□□□□ 0.95
TMED7-201ENST00000456936 NESP48681 1621 aa20.98■□□□□ 0.95
TMED7-201ENST00000456936 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
TMED7-201ENST00000456936 SYNJ1O43426 1573 aa20.96■□□□□ 0.95
TMED7-201ENST00000456936 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.93
TMED7-201ENST00000456936 CEP162Q5TB80 1403 aa20.85■□□□□ 0.93
TMED7-201ENST00000456936 CUX1P39880 1505 aa20.8■□□□□ 0.92
TMED7-201ENST00000456936 PDS5BQ9NTI5 1447 aa20.8■□□□□ 0.92
TMED7-201ENST00000456936 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
TMED7-201ENST00000456936 CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
TMED7-201ENST00000456936 EEA1Q15075 1411 aa20.75■□□□□ 0.91
TMED7-201ENST00000456936 TNIKQ9UKE5 1360 aa20.75■□□□□ 0.91
TMED7-201ENST00000456936 LAMC3Q9Y6N6 1575 aa20.74■□□□□ 0.91
TMED7-201ENST00000456936 GOLGA3Q08378 1498 aa20.72■□□□□ 0.91
TMED7-201ENST00000456936 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
TMED7-201ENST00000456936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.66■□□□□ 0.9
TMED7-201ENST00000456936 FGD5Q6ZNL6 1462 aa20.66■□□□□ 0.9
TMED7-201ENST00000456936 RAPGEF2Q9Y4G8 1499 aa20.65■□□□□ 0.9
TMED7-201ENST00000456936 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
TMED7-201ENST00000456936 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
TMED7-201ENST00000456936 CUX2O14529 1486 aa20.64■□□□□ 0.89
TMED7-201ENST00000456936 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
TMED7-201ENST00000456936 TOPBP1Q92547 1522 aa20.6■□□□□ 0.89
TMED7-201ENST00000456936 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
TMED7-201ENST00000456936 DNMBPQ6XZF7 1577 aa20.56■□□□□ 0.88
TMED7-201ENST00000456936 CLIP1P30622 1438 aa20.55■□□□□ 0.88
TMED7-201ENST00000456936 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
TMED7-201ENST00000456936 POLA1P09884 1462 aaPredicted RBP20.52■□□□□ 0.88
TMED7-201ENST00000456936 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
TMED7-201ENST00000456936 CCER1Q8TC90 406 aaPredicted RBP20.5■□□□□ 0.87
TMED7-201ENST00000456936 KIF21BO75037 1637 aa20.5■□□□□ 0.87
TMED7-201ENST00000456936 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
TMED7-201ENST00000456936 MRC2Q9UBG0 1479 aa20.45■□□□□ 0.86
TMED7-201ENST00000456936 ZEB1P37275 1124 aaPredicted RBP20.43■□□□□ 0.86
TMED7-201ENST00000456936 IGF1RP08069 1367 aa20.42■□□□□ 0.86
TMED7-201ENST00000456936 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
TMED7-201ENST00000456936 CARMIL1Q5VZK9 1371 aa20.4■□□□□ 0.86
TMED7-201ENST00000456936 APLP2Q06481 763 aa20.4■□□□□ 0.86
TMED7-201ENST00000456936 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
TMED7-201ENST00000456936 PRXQ9BXM0 1461 aa20.35■□□□□ 0.85
TMED7-201ENST00000456936 VPS8Q8N3P4 1428 aa20.34■□□□□ 0.85
TMED7-201ENST00000456936 GAPVD1Q14C86 1478 aa20.29■□□□□ 0.84
TMED7-201ENST00000456936 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.84
TMED7-201ENST00000456936 FBLN2P98095 1184 aa20.24■□□□□ 0.83
TMED7-201ENST00000456936 P3H3Q8IVL6 736 aa20.24■□□□□ 0.83
TMED7-201ENST00000456936 ERICH3Q5RHP9 1530 aa20.24■□□□□ 0.83
TMED7-201ENST00000456936 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
TMED7-201ENST00000456936 ARAP1Q96P48 1450 aa20.22■□□□□ 0.83
TMED7-201ENST00000456936 ATP1B4Q9UN42 357 aaPredicted RBP20.2■□□□□ 0.82
TMED7-201ENST00000456936 WDR62O43379 1518 aa20.19■□□□□ 0.82
TMED7-201ENST00000456936 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms