RNA–Protein interactions for RNA: ENST00000584632.5

CDK12-209, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-209ENST00000584632 NISCHQ9Y2I1 1504 aa25.55■■□□□ 1.68
CDK12-209ENST00000584632 SHROOM4Q9ULL8 1493 aa22.69■■□□□ 1.22
CDK12-209ENST00000584632 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
CDK12-209ENST00000584632 DCAF8L2P0C7V8 631 aa22.22■■□□□ 1.15
CDK12-209ENST00000584632 HRCP23327 699 aa21.99■■□□□ 1.11
CDK12-209ENST00000584632 PCGF6Q9BYE7 350 aa21.94■■□□□ 1.1
CDK12-209ENST00000584632 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
CDK12-209ENST00000584632 ZCCHC6Q5VYS8 1495 aaKnown RBP21.58■■□□□ 1.05
CDK12-209ENST00000584632 PPARGC1BQ86YN6 1023 aaKnown RBP21.39■■□□□ 1.01
CDK12-209ENST00000584632 TRIM26Q12899 539 aaPredicted RBP21.37■■□□□ 1.01
CDK12-209ENST00000584632 MYO15BQ96JP2 1530 aa21.36■■□□□ 1.01
CDK12-209ENST00000584632 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
CDK12-209ENST00000584632 LOC105371045A0A1W2PR82 267 aa21.31■■□□□ 1
CDK12-209ENST00000584632 CCDC180Q9P1Z9 1646 aa21.3■■□□□ 1
CDK12-209ENST00000584632 DCAF1Q9Y4B6 1507 aa21.22■□□□□ 0.99
CDK12-209ENST00000584632 PELP1Q8IZL8 1130 aaKnown RBP21.15■□□□□ 0.98
CDK12-209ENST00000584632 TRIM41Q8WV44 630 aa21.11■□□□□ 0.97
CDK12-209ENST00000584632 FAM9AQ8IZU1 332 aaPredicted RBP21.03■□□□□ 0.96
CDK12-209ENST00000584632 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
CDK12-209ENST00000584632 CCER1Q8TC90 406 aaPredicted RBP20.7■□□□□ 0.9
CDK12-209ENST00000584632 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.89
CDK12-209ENST00000584632 RSF1Q96T23 1441 aaPredicted RBP20.46■□□□□ 0.87
CDK12-209ENST00000584632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.42■□□□□ 0.86
CDK12-209ENST00000584632 SCAF1Q9H7N4 1312 aaKnown RBP20.4■□□□□ 0.86
CDK12-209ENST00000584632 MYT1Q01538 1121 aa20.4■□□□□ 0.86
CDK12-209ENST00000584632 TTBK1Q5TCY1 1321 aaPredicted RBP20.39■□□□□ 0.86
CDK12-209ENST00000584632 ABCC9O60706 1549 aa20.39■□□□□ 0.85
CDK12-209ENST00000584632 SCRIBQ14160 1630 aa20.36■□□□□ 0.85
CDK12-209ENST00000584632 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
CDK12-209ENST00000584632 ACIN1Q9UKV3 1341 aaKnown RBP20.32■□□□□ 0.84
CDK12-209ENST00000584632 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
CDK12-209ENST00000584632 UBTFP17480 764 aaKnown RBP20.22■□□□□ 0.83
CDK12-209ENST00000584632 APLP2Q06481 763 aa20.18■□□□□ 0.82
CDK12-209ENST00000584632 GTF3C3Q9Y5Q9 886 aa20.18■□□□□ 0.82
CDK12-209ENST00000584632 NEUROD1Q13562 356 aa20.12■□□□□ 0.81
CDK12-209ENST00000584632 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
CDK12-209ENST00000584632 ZNF316A6NFI3 1004 aaPredicted RBP20.03■□□□□ 0.8
CDK12-209ENST00000584632 CECR2Q9BXF3 1484 aa19.92■□□□□ 0.78
CDK12-209ENST00000584632 HNRNPUL2Q1KMD3 747 aaKnown RBP19.91■□□□□ 0.78
CDK12-209ENST00000584632 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
CDK12-209ENST00000584632 NACADO15069 1562 aa19.88■□□□□ 0.77
CDK12-209ENST00000584632 MROH2BQ7Z745 1585 aa19.85■□□□□ 0.77
CDK12-209ENST00000584632 CEP162Q5TB80 1403 aa19.82■□□□□ 0.76
CDK12-209ENST00000584632 RANGAP1P46060 587 aaPredicted RBP19.79■□□□□ 0.76
CDK12-209ENST00000584632 TNIKQ9UKE5 1360 aa19.77■□□□□ 0.76
CDK12-209ENST00000584632 EEA1Q15075 1411 aa19.76■□□□□ 0.75
CDK12-209ENST00000584632 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
CDK12-209ENST00000584632 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
CDK12-209ENST00000584632 WIZO95785 1651 aa19.7■□□□□ 0.74
CDK12-209ENST00000584632 MIER1Q8N108 512 aa19.64■□□□□ 0.73
CDK12-209ENST00000584632 GOLGA3Q08378 1498 aa19.62■□□□□ 0.73
CDK12-209ENST00000584632 CCDC88BA6NC98 1476 aa19.59■□□□□ 0.73
CDK12-209ENST00000584632 SOGA1O94964 1423 aa19.58■□□□□ 0.72
CDK12-209ENST00000584632 CLSPNQ9HAW4 1339 aa19.57■□□□□ 0.72
CDK12-209ENST00000584632 ABCC8Q09428 1581 aa19.55■□□□□ 0.72
CDK12-209ENST00000584632 CLIP1P30622 1438 aa19.5■□□□□ 0.71
CDK12-209ENST00000584632 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
CDK12-209ENST00000584632 CEP164Q9UPV0 1460 aa19.46■□□□□ 0.71
CDK12-209ENST00000584632 PABPN1Q86U42 306 aaKnown RBP eCLIP19.4■□□□□ 0.7
CDK12-209ENST00000584632 NEFLP07196 543 aa19.39■□□□□ 0.69
CDK12-209ENST00000584632 ITGAEP38570 1179 aa19.36■□□□□ 0.69
CDK12-209ENST00000584632 VPS8Q8N3P4 1428 aa19.33■□□□□ 0.68
CDK12-209ENST00000584632 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
CDK12-209ENST00000584632 SMARCA4P51532 1647 aa19.3■□□□□ 0.68
CDK12-209ENST00000584632 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
CDK12-209ENST00000584632 EIF4G1Q04637 1599 aaKnown RBP19.19■□□□□ 0.66
CDK12-209ENST00000584632 SUPT16HQ9Y5B9 1047 aaKnown RBP19.18■□□□□ 0.66
CDK12-209ENST00000584632 ATP1B4Q9UN42 357 aaPredicted RBP19.18■□□□□ 0.66
CDK12-209ENST00000584632 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
CDK12-209ENST00000584632 BCANQ96GW7 911 aa19.12■□□□□ 0.65
CDK12-209ENST00000584632 ERICH6Q7L0X2 663 aa19.09■□□□□ 0.65
CDK12-209ENST00000584632 FAM50AQ14320 339 aaKnown RBP19.07■□□□□ 0.64
CDK12-209ENST00000584632 KIF21BO75037 1637 aa19.07■□□□□ 0.64
CDK12-209ENST00000584632 RAPGEF2Q9Y4G8 1499 aa19.06■□□□□ 0.64
CDK12-209ENST00000584632 DHX57Q6P158 1386 aaKnown RBP19.06■□□□□ 0.64
CDK12-209ENST00000584632 ANP32CO43423 234 aa19.05■□□□□ 0.64
CDK12-209ENST00000584632 FKBP8Q14318 412 aa19.04■□□□□ 0.64
CDK12-209ENST00000584632 DDX10Q13206 875 aaKnown RBP19.01■□□□□ 0.63
CDK12-209ENST00000584632 ANP32EQ9BTT0 268 aa18.99■□□□□ 0.63
CDK12-209ENST00000584632 CCNB3Q8WWL7 1395 aa18.99■□□□□ 0.63
CDK12-209ENST00000584632 KANK4Q5T7N3 995 aaPredicted RBP18.98■□□□□ 0.63
CDK12-209ENST00000584632 KIF27Q86VH2 1401 aa18.94■□□□□ 0.62
CDK12-209ENST00000584632 TSHZ2Q9NRE2 1034 aa18.93■□□□□ 0.62
CDK12-209ENST00000584632 SYNJ1O43426 1573 aa18.92■□□□□ 0.62
CDK12-209ENST00000584632 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
CDK12-209ENST00000584632 TIMELESSQ9UNS1 1208 aa18.83■□□□□ 0.6
CDK12-209ENST00000584632 TRIM52Q96A61 297 aa18.82■□□□□ 0.6
CDK12-209ENST00000584632 CDK11AQ9UQ88 783 aaPredicted RBP18.82■□□□□ 0.6
CDK12-209ENST00000584632 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
CDK12-209ENST00000584632 TONSLQ96HA7 1378 aa18.8■□□□□ 0.6
CDK12-209ENST00000584632 SETD5Q9C0A6 1442 aa18.79■□□□□ 0.6
CDK12-209ENST00000584632 P3H3Q8IVL6 736 aa18.78■□□□□ 0.6
CDK12-209ENST00000584632 RRBP1Q9P2E9 1410 aaKnown RBP18.78■□□□□ 0.6
CDK12-209ENST00000584632 ERICH3Q5RHP9 1530 aa18.77■□□□□ 0.6
CDK12-209ENST00000584632 SIN3AQ96ST3 1273 aa18.77■□□□□ 0.6
CDK12-209ENST00000584632 CCER2I3L3R5 266 aa18.76■□□□□ 0.59
CDK12-209ENST00000584632 HIRIP3Q9BW71 556 aaPredicted RBP18.73■□□□□ 0.59
CDK12-209ENST00000584632 KCNH8Q96L42 1107 aa18.72■□□□□ 0.59
CDK12-209ENST00000584632 ARAP1Q96P48 1450 aa18.72■□□□□ 0.59
CDK12-209ENST00000584632 PRXQ9BXM0 1461 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms