RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, humanhuman

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EP400-208ENST00000611841 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
EP400-208ENST00000611841 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.83
EP400-208ENST00000611841 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
EP400-208ENST00000611841 SUPT5HO00267 1087 aaKnown RBP19.91■□□□□ 0.78
EP400-208ENST00000611841 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
EP400-208ENST00000611841 CCDC180Q9P1Z9 1646 aa19.26■□□□□ 0.67
EP400-208ENST00000611841 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
EP400-208ENST00000611841 HRCP23327 699 aa19■□□□□ 0.63
EP400-208ENST00000611841 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
EP400-208ENST00000611841 PPARGC1BQ86YN6 1023 aaKnown RBP18.82■□□□□ 0.6
EP400-208ENST00000611841 PELP1Q8IZL8 1130 aaKnown RBP18.76■□□□□ 0.59
EP400-208ENST00000611841 PCGF6Q9BYE7 350 aa18.75■□□□□ 0.59
EP400-208ENST00000611841 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
EP400-208ENST00000611841 DCAF1Q9Y4B6 1507 aa18.66■□□□□ 0.58
EP400-208ENST00000611841 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
EP400-208ENST00000611841 FAM9AQ8IZU1 332 aaPredicted RBP18.49■□□□□ 0.55
EP400-208ENST00000611841 SCRIBQ14160 1630 aa18.45■□□□□ 0.54
EP400-208ENST00000611841 TRIM41Q8WV44 630 aa18.43■□□□□ 0.54
EP400-208ENST00000611841 ABCC9O60706 1549 aa18.43■□□□□ 0.54
EP400-208ENST00000611841 RSF1Q96T23 1441 aaPredicted RBP18.35■□□□□ 0.53
EP400-208ENST00000611841 SCAF1Q9H7N4 1312 aaKnown RBP18.26■□□□□ 0.51
EP400-208ENST00000611841 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
EP400-208ENST00000611841 CECR2Q9BXF3 1484 aa18.13■□□□□ 0.49
EP400-208ENST00000611841 MYT1Q01538 1121 aa18.07■□□□□ 0.48
EP400-208ENST00000611841 RB1CC1Q8TDY2 1594 aa18.07■□□□□ 0.48
EP400-208ENST00000611841 NACADO15069 1562 aa18■□□□□ 0.47
EP400-208ENST00000611841 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
EP400-208ENST00000611841 PABPN1Q86U42 306 aaKnown RBP eCLIP17.86■□□□□ 0.45
EP400-208ENST00000611841 TTBK1Q5TCY1 1321 aaPredicted RBP17.86■□□□□ 0.45
EP400-208ENST00000611841 WIZO95785 1651 aa17.83■□□□□ 0.45
EP400-208ENST00000611841 ZEB1P37275 1124 aaPredicted RBP17.76■□□□□ 0.43
EP400-208ENST00000611841 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
EP400-208ENST00000611841 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
EP400-208ENST00000611841 UBTFP17480 764 aaKnown RBP17.65■□□□□ 0.42
EP400-208ENST00000611841 ACIN1Q9UKV3 1341 aaKnown RBP17.65■□□□□ 0.42
EP400-208ENST00000611841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.64■□□□□ 0.41
EP400-208ENST00000611841 GTF3C3Q9Y5Q9 886 aa17.64■□□□□ 0.41
EP400-208ENST00000611841 CCER1Q8TC90 406 aaPredicted RBP17.61■□□□□ 0.41
EP400-208ENST00000611841 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
EP400-208ENST00000611841 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
EP400-208ENST00000611841 RANGAP1P46060 587 aaPredicted RBP17.52■□□□□ 0.39
EP400-208ENST00000611841 CSRNP3Q8WYN3 585 aa17.52■□□□□ 0.39
EP400-208ENST00000611841 SOGA1O94964 1423 aa17.49■□□□□ 0.39
EP400-208ENST00000611841 SMARCA4P51532 1647 aa17.47■□□□□ 0.39
EP400-208ENST00000611841 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
EP400-208ENST00000611841 CENPBP07199 599 aaPredicted RBP17.4■□□□□ 0.38
EP400-208ENST00000611841 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
EP400-208ENST00000611841 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
EP400-208ENST00000611841 CEP162Q5TB80 1403 aa17.38■□□□□ 0.37
EP400-208ENST00000611841 EIF4G1Q04637 1599 aaKnown RBP17.3■□□□□ 0.36
EP400-208ENST00000611841 TNIKQ9UKE5 1360 aa17.3■□□□□ 0.36
EP400-208ENST00000611841 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.369e-6■■■■■ 50.1
EP400-208ENST00000611841 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
EP400-208ENST00000611841 APLP2Q06481 763 aa17.27■□□□□ 0.36
EP400-208ENST00000611841 UNC13AQ9UPW8 1703 aa17.27■□□□□ 0.36
EP400-208ENST00000611841 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
EP400-208ENST00000611841 EEA1Q15075 1411 aa17.21■□□□□ 0.35
EP400-208ENST00000611841 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.35
EP400-208ENST00000611841 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
EP400-208ENST00000611841 GOLGA3Q08378 1498 aa17.18■□□□□ 0.34
EP400-208ENST00000611841 BAZ1BQ9UIG0 1483 aaKnown RBP17.17■□□□□ 0.34
EP400-208ENST00000611841 ATAD2BQ9ULI0 1458 aa17.15■□□□□ 0.34
EP400-208ENST00000611841 BCL11AQ9H165 835 aa17.1■□□□□ 0.33
EP400-208ENST00000611841 CLIP1P30622 1438 aa17.1■□□□□ 0.33
EP400-208ENST00000611841 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
EP400-208ENST00000611841 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
EP400-208ENST00000611841 RAPGEF2Q9Y4G8 1499 aa17.01■□□□□ 0.31
EP400-208ENST00000611841 ZNF316A6NFI3 1004 aaPredicted RBP16.99■□□□□ 0.31
EP400-208ENST00000611841 PEG3Q9GZU2 1588 aa16.96■□□□□ 0.31
EP400-208ENST00000611841 ITGAEP38570 1179 aa16.93■□□□□ 0.3
EP400-208ENST00000611841 VPS8Q8N3P4 1428 aa16.92■□□□□ 0.3
EP400-208ENST00000611841 KANK4Q5T7N3 995 aaPredicted RBP16.87■□□□□ 0.29
EP400-208ENST00000611841 ATP1B4Q9UN42 357 aaPredicted RBP16.85■□□□□ 0.29
EP400-208ENST00000611841 KIF21BO75037 1637 aa16.83■□□□□ 0.29
EP400-208ENST00000611841 ANP32EQ9BTT0 268 aa16.83■□□□□ 0.28
EP400-208ENST00000611841 MIER1Q8N108 512 aa16.81■□□□□ 0.28
EP400-208ENST00000611841 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
EP400-208ENST00000611841 P3H3Q8IVL6 736 aa16.77■□□□□ 0.27
EP400-208ENST00000611841 NCAPD3P42695 1498 aa16.76■□□□□ 0.27
EP400-208ENST00000611841 TOP2BQ02880 1626 aa16.76■□□□□ 0.27
EP400-208ENST00000611841 PRXQ9BXM0 1461 aa16.7■□□□□ 0.26
EP400-208ENST00000611841 CUX1P39880 1505 aa16.7■□□□□ 0.26
EP400-208ENST00000611841 ARAP1Q96P48 1450 aa16.66■□□□□ 0.26
EP400-208ENST00000611841 CUX2O14529 1486 aa16.65■□□□□ 0.26
EP400-208ENST00000611841 CFTRP13569 1480 aa16.65■□□□□ 0.26
EP400-208ENST00000611841 FAM50AQ14320 339 aaKnown RBP16.64■□□□□ 0.25
EP400-208ENST00000611841 PRKCSHP14314 528 aaPredicted RBP16.64■□□□□ 0.25
EP400-208ENST00000611841 TSHZ2Q9NRE2 1034 aa16.64■□□□□ 0.25
EP400-208ENST00000611841 SUPT16HQ9Y5B9 1047 aaKnown RBP16.61■□□□□ 0.25
EP400-208ENST00000611841 HMGXB3Q12766 1538 aa16.61■□□□□ 0.25
EP400-208ENST00000611841 IGF1RP08069 1367 aa16.6■□□□□ 0.25
EP400-208ENST00000611841 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
EP400-208ENST00000611841 CARMIL1Q5VZK9 1371 aa16.59■□□□□ 0.25
EP400-208ENST00000611841 DHX57Q6P158 1386 aaKnown RBP16.59■□□□□ 0.25
EP400-208ENST00000611841 ERICH3Q5RHP9 1530 aa16.59■□□□□ 0.25
EP400-208ENST00000611841 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
EP400-208ENST00000611841 CCNB3Q8WWL7 1395 aa16.57■□□□□ 0.24
EP400-208ENST00000611841 ARHGAP35Q9NRY4 1499 aa16.55■□□□□ 0.24
EP400-208ENST00000611841 CLSPNQ9HAW4 1339 aa16.51■□□□□ 0.23
EP400-208ENST00000611841 FGD5Q6ZNL6 1462 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms