RNA–Protein interactions for RNA: ENST00000471023.1

NOP56-211, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 2

Gene NOP56, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-211ENST00000471023 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
NOP56-211ENST00000471023 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
NOP56-211ENST00000471023 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
NOP56-211ENST00000471023 SENP3Q9H4L4 574 aaPredicted RBP19.37■□□□□ 0.69
NOP56-211ENST00000471023 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
NOP56-211ENST00000471023 FOXD1Q16676 465 aa18.05■□□□□ 0.48
NOP56-211ENST00000471023 NISCHQ9Y2I1 1504 aa18.03■□□□□ 0.48
NOP56-211ENST00000471023 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
NOP56-211ENST00000471023 ADRA2BP18089 450 aa17.42■□□□□ 0.38
NOP56-211ENST00000471023 PIAS4Q8N2W9 510 aaPredicted RBP17.01■□□□□ 0.31
NOP56-211ENST00000471023 MSH5O43196 834 aa16.54■□□□□ 0.24
NOP56-211ENST00000471023 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
NOP56-211ENST00000471023 CCDC180Q9P1Z9 1646 aa15.93■□□□□ 0.14
NOP56-211ENST00000471023 ABCC9O60706 1549 aa15.93■□□□□ 0.14
NOP56-211ENST00000471023 MAPK8IP2Q13387 824 aaPredicted RBP15.81■□□□□ 0.12
NOP56-211ENST00000471023 SCAF1Q9H7N4 1312 aaKnown RBP15.78■□□□□ 0.12
NOP56-211ENST00000471023 KCNA4P22459 653 aa15.77■□□□□ 0.12
NOP56-211ENST00000471023 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
NOP56-211ENST00000471023 CNKSR2Q8WXI2 1034 aa15.56■□□□□ 0.08
NOP56-211ENST00000471023 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
NOP56-211ENST00000471023 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
NOP56-211ENST00000471023 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
NOP56-211ENST00000471023 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
NOP56-211ENST00000471023 RB1CC1Q8TDY2 1594 aa15.16■□□□□ 0.02
NOP56-211ENST00000471023 DCAF8L2P0C7V8 631 aa15.11■□□□□ 0.01
NOP56-211ENST00000471023 NACADO15069 1562 aa15.08■□□□□ 0
NOP56-211ENST00000471023 POTEDQ86YR6 584 aa15.08■□□□□ 0
NOP56-211ENST00000471023 ZCCHC6Q5VYS8 1495 aaKnown RBP15.07■□□□□ 0
NOP56-211ENST00000471023 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
NOP56-211ENST00000471023 SLC4A1APQ9BWU0 796 aaKnown RBP14.98□□□□□ -0.01
NOP56-211ENST00000471023 MYO15BQ96JP2 1530 aa14.96□□□□□ -0.02
NOP56-211ENST00000471023 DCAF1Q9Y4B6 1507 aa14.95□□□□□ -0.02
NOP56-211ENST00000471023 PABPN1Q86U42 306 aaKnown RBP eCLIP14.9□□□□□ -0.023e-28■□□□□ 8.5
NOP56-211ENST00000471023 DCAF8L1A6NGE4 600 aa14.85□□□□□ -0.03
NOP56-211ENST00000471023 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
NOP56-211ENST00000471023 BICRAQ9NZM4 1560 aa14.63□□□□□ -0.07
NOP56-211ENST00000471023 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
NOP56-211ENST00000471023 SHROOM4Q9ULL8 1493 aa14.59□□□□□ -0.07
NOP56-211ENST00000471023 SLC4A2P04920 1241 aa14.59□□□□□ -0.07
NOP56-211ENST00000471023 ZBTB22O15209 634 aa14.55□□□□□ -0.08
NOP56-211ENST00000471023 SCRIBQ14160 1630 aa14.52□□□□□ -0.09
NOP56-211ENST00000471023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.092e-10■■■□□ 15.9
NOP56-211ENST00000471023 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
NOP56-211ENST00000471023 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
NOP56-211ENST00000471023 CECR2Q9BXF3 1484 aa14.4□□□□□ -0.1
NOP56-211ENST00000471023 CC2D2AQ9P2K1 1620 aa14.34□□□□□ -0.11
NOP56-211ENST00000471023 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
NOP56-211ENST00000471023 U3KPZ7 1027 aaPredicted RBP14.29□□□□□ -0.12
NOP56-211ENST00000471023 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
NOP56-211ENST00000471023 MYCNP04198 464 aaPredicted RBP14.21□□□□□ -0.13
NOP56-211ENST00000471023 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
NOP56-211ENST00000471023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
NOP56-211ENST00000471023 HNRNPUL2Q1KMD3 747 aaKnown RBP13.99□□□□□ -0.17
NOP56-211ENST00000471023 DNAJC5Q9H3Z4 198 aa13.98□□□□□ -0.17
NOP56-211ENST00000471023 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
NOP56-211ENST00000471023 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
NOP56-211ENST00000471023 SMARCA4P51532 1647 aa13.94□□□□□ -0.18
NOP56-211ENST00000471023 ATF5Q9Y2D1 282 aaPredicted RBP13.93□□□□□ -0.18
NOP56-211ENST00000471023 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
NOP56-211ENST00000471023 BAZ1AQ9NRL2 1556 aaPredicted RBP13.92□□□□□ -0.18
NOP56-211ENST00000471023 SPINK5Q9NQ38 1064 aaPredicted RBP13.91□□□□□ -0.18
NOP56-211ENST00000471023 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
NOP56-211ENST00000471023 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
NOP56-211ENST00000471023 PEG3Q9GZU2 1588 aa13.85□□□□□ -0.19
NOP56-211ENST00000471023 SMARCA2P51531 1590 aa13.83□□□□□ -0.19
NOP56-211ENST00000471023 ERCC6Q03468 1493 aa13.83□□□□□ -0.2
NOP56-211ENST00000471023 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
NOP56-211ENST00000471023 CUX2O14529 1486 aa13.82□□□□□ -0.2
NOP56-211ENST00000471023 CACNB1Q02641 598 aaPredicted RBP13.82□□□□□ -0.2
NOP56-211ENST00000471023 APLP2Q06481 763 aa13.81□□□□□ -0.2
NOP56-211ENST00000471023 CAPN15O75808 1086 aa13.8□□□□□ -0.2
NOP56-211ENST00000471023 HMGXB3Q12766 1538 aa13.77□□□□□ -0.21
NOP56-211ENST00000471023 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
NOP56-211ENST00000471023 WIZO95785 1651 aa13.75□□□□□ -0.21
NOP56-211ENST00000471023 BAZ1BQ9UIG0 1483 aaKnown RBP13.73□□□□□ -0.21
NOP56-211ENST00000471023 ZNF219Q9P2Y4 722 aaPredicted RBP13.68□□□□□ -0.22
NOP56-211ENST00000471023 PDS5BQ9NTI5 1447 aa13.63□□□□□ -0.23
NOP56-211ENST00000471023 NESP48681 1621 aa13.62□□□□□ -0.23
NOP56-211ENST00000471023 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
NOP56-211ENST00000471023 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.23
NOP56-211ENST00000471023 ABCB7O75027 752 aa13.58□□□□□ -0.24
NOP56-211ENST00000471023 DSG3P32926 999 aa13.57□□□□□ -0.24
NOP56-211ENST00000471023 CADPSQ9ULU8 1353 aa13.56□□□□□ -0.24
NOP56-211ENST00000471023 POLA2Q14181 598 aa13.52□□□□□ -0.25
NOP56-211ENST00000471023 CCDC88BA6NC98 1476 aa13.46□□□□□ -0.25
NOP56-211ENST00000471023 SUPT5HO00267 1087 aaKnown RBP13.43□□□□□ -0.26
NOP56-211ENST00000471023 THOC2Q8NI27 1593 aaKnown RBP13.43□□□□□ -0.26
NOP56-211ENST00000471023 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
NOP56-211ENST00000471023 CFTRP13569 1480 aa13.38□□□□□ -0.27
NOP56-211ENST00000471023 CEP164Q9UPV0 1460 aa13.35□□□□□ -0.27
NOP56-211ENST00000471023 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
NOP56-211ENST00000471023 FANCD2Q9BXW9 1451 aa13.34□□□□□ -0.27
NOP56-211ENST00000471023 WDR62O43379 1518 aa13.33□□□□□ -0.28
NOP56-211ENST00000471023 OSCARQ8IYS5 282 aa13.32□□□□□ -0.28
NOP56-211ENST00000471023 MKRN4PQ13434 485 aaPredicted RBP13.31□□□□□ -0.28
NOP56-211ENST00000471023 TRIM41Q8WV44 630 aa13.27□□□□□ -0.29
NOP56-211ENST00000471023 PRDM2Q13029 1718 aa13.22□□□□□ -0.29
NOP56-211ENST00000471023 FBLN2P98095 1184 aa13.22□□□□□ -0.29
NOP56-211ENST00000471023 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
NOP56-211ENST00000471023 URB2Q14146 1524 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms