Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 SUMO3-206ENST00000479153 1736 ntTSL 213.9□□□□□ -0.186e-13■■■■□ 19.5
FUBP3Q96I24 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.139e-8■■■■□ 19.5
FUBP3Q96I24 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.292e-10■■■■□ 19.5
FUBP3Q96I24 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.677e-7■■■■□ 19.5
FUBP3Q96I24 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.552e-7■■■■□ 19.5
FUBP3Q96I24 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.133e-9■■■■□ 19.4
FUBP3Q96I24 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.96□□□□□ -1.623e-9■■■■□ 19.4
FUBP3Q96I24 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.516e-7■■■■□ 19.4
FUBP3Q96I24 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.185e-8■■■■□ 19.4
FUBP3Q96I24 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.776e-7■■■■□ 19.4
FUBP3Q96I24 TOP2A-202ENST00000577541 420 ntTSL 23.54□□□□□ -1.846e-7■■■■□ 19.4
FUBP3Q96I24 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.312e-7■■■■□ 19.3
FUBP3Q96I24 TGFBR3-210ENST00000533089 6455 ntTSL 1 (best)6.59□□□□□ -1.362e-7■■■■□ 19.3
FUBP3Q96I24 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.451e-7■■■■□ 19.3
FUBP3Q96I24 KIAA1109-207ENST00000438707 5528 ntTSL 55.39□□□□□ -1.551e-7■■■■□ 19.3
FUBP3Q96I24 KIAA1109-202ENST00000306802 4650 ntTSL 1 (best)3.83□□□□□ -1.81e-7■■■■□ 19.3
FUBP3Q96I24 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.851e-7■■■■□ 19.3
FUBP3Q96I24 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.672e-7■■■■□ 19.3
FUBP3Q96I24 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.082e-7■■■■□ 19.3
FUBP3Q96I24 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.072e-7■■■■□ 19.3
FUBP3Q96I24 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.062e-7■■■■□ 19.3
FUBP3Q96I24 NEDD4L-223ENST00000588516 1304 ntTSL 514.15□□□□□ -0.152e-7■■■■□ 19.3
FUBP3Q96I24 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC13.03□□□□□ -0.322e-7■■■■□ 19.3
FUBP3Q96I24 EPB41L2-207ENST00000456097 1138 ntTSL 512.39□□□□□ -0.432e-7■■■■□ 19.3
FUBP3Q96I24 EPB41L2-210ENST00000525198 981 ntTSL 512.23□□□□□ -0.452e-7■■■■□ 19.3
FUBP3Q96I24 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC11.88□□□□□ -0.512e-7■■■■□ 19.3
FUBP3Q96I24 EPB41L2-217ENST00000527423 962 ntTSL 411.03□□□□□ -0.642e-7■■■■□ 19.3
FUBP3Q96I24 EPB41L2-218ENST00000527659 2436 ntTSL 5 BASIC10.79□□□□□ -0.682e-7■■■■□ 19.3
FUBP3Q96I24 LEAP2-203ENST00000485457 457 ntTSL 210.46□□□□□ -0.732e-10■■■■□ 19.3
FUBP3Q96I24 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC10.33□□□□□ -0.762e-7■■■■□ 19.3
FUBP3Q96I24 EPB41L2-215ENST00000527017 727 ntTSL 510.02□□□□□ -0.812e-7■■■■□ 19.3
FUBP3Q96I24 LEAP2-202ENST00000483190 935 ntTSL 1 (best)9.8□□□□□ -0.842e-10■■■■□ 19.3
FUBP3Q96I24 RFK-206ENST00000490113 2386 ntTSL 29.52□□□□□ -0.892e-7■■■■□ 19.3
FUBP3Q96I24 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC9.45□□□□□ -0.92e-7■■■■□ 19.3
FUBP3Q96I24 EPB41L2-230ENST00000533912 514 ntTSL 59.19□□□□□ -0.942e-7■■■■□ 19.3
FUBP3Q96I24 LEAP2-201ENST00000296877 2207 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -12e-10■■■■□ 19.3
FUBP3Q96I24 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.012e-7■■■■□ 19.3
FUBP3Q96I24 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.08□□□□□ -1.122e-7■■■■□ 19.3
FUBP3Q96I24 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.182e-7■■■■□ 19.3
FUBP3Q96I24 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.09□□□□□ -1.282e-7■■■■□ 19.3
FUBP3Q96I24 EPB41L2-231ENST00000534166 572 ntTSL 36.63□□□□□ -1.352e-7■■■■□ 19.3
FUBP3Q96I24 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.59□□□□□ -1.832e-10■■■■□ 19.3
FUBP3Q96I24 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.862e-10■■■■□ 19.3
FUBP3Q96I24 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.12□□□□□ -1.912e-10■■■■□ 19.3
FUBP3Q96I24 NET1-201ENST00000355029 3402 ntTSL 1 (best) BASIC10.98□□□□□ -0.652e-6■■■■□ 19.3
FUBP3Q96I24 NET1-202ENST00000380359 3253 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.762e-6■■■■□ 19.3
FUBP3Q96I24 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.21■□□□□ 0.359e-7■■■■□ 19.3
FUBP3Q96I24 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.29■□□□□ 0.049e-7■■■■□ 19.3
FUBP3Q96I24 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.549e-7■■■■□ 19.3
FUBP3Q96I24 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.01□□□□□ -1.139e-7■■■■□ 19.3
FUBP3Q96I24 FARP1-224ENST00000598389 747 ntTSL 56.13□□□□□ -1.439e-7■■■■□ 19.3
FUBP3Q96I24 U2SURP-205ENST00000467348 1267 ntTSL 56.95□□□□□ -1.31e-6■■■□□ 19.2
FUBP3Q96I24 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.67□□□□□ -1.661e-6■■■□□ 19.2
FUBP3Q96I24 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.691e-6■■■□□ 19.2
FUBP3Q96I24 U2SURP-203ENST00000463563 4364 ntTSL 23.11□□□□□ -1.911e-6■■■□□ 19.2
FUBP3Q96I24 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.597e-13■■■□□ 19.2
FUBP3Q96I24 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.761e-9■■■□□ 19.2
FUBP3Q96I24 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.723e-6■■■□□ 19.2
FUBP3Q96I24 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.333e-6■■■□□ 19.2
FUBP3Q96I24 DDX3X-212ENST00000616050 818 ntTSL 511.88□□□□□ -0.513e-6■■■□□ 19.2
FUBP3Q96I24 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC10.86□□□□□ -0.673e-6■■■□□ 19.2
FUBP3Q96I24 DDX3X-215ENST00000625837 3237 ntTSL 5 BASIC10.7□□□□□ -0.73e-6■■■□□ 19.2
FUBP3Q96I24 DDX3X-216ENST00000626301 3013 ntTSL 5 BASIC10.61□□□□□ -0.713e-6■■■□□ 19.2
FUBP3Q96I24 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.783e-6■■■□□ 19.2
FUBP3Q96I24 DDX3X-218ENST00000629785 3457 ntTSL 59.79□□□□□ -0.843e-6■■■□□ 19.2
FUBP3Q96I24 DDX3X-220ENST00000630370 3120 ntTSL 59.78□□□□□ -0.843e-6■■■□□ 19.2
FUBP3Q96I24 DDX3X-219ENST00000630255 3289 ntTSL 59.6□□□□□ -0.873e-6■■■□□ 19.2
FUBP3Q96I24 DDX3X-221ENST00000630858 3181 ntTSL 59.33□□□□□ -0.923e-6■■■□□ 19.2
FUBP3Q96I24 DDX3X-204ENST00000478993 3397 ntTSL 1 (best)9.25□□□□□ -0.933e-6■■■□□ 19.2
FUBP3Q96I24 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.571e-7■■■□□ 19.2
FUBP3Q96I24 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.29■□□□□ 0.842e-9■■■□□ 19.2
FUBP3Q96I24 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.95□□□□□ -0.022e-9■■■□□ 19.2
FUBP3Q96I24 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC12.07□□□□□ -0.482e-9■■■□□ 19.2
FUBP3Q96I24 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.07■□□□□ 01e-6■■■□□ 19.2
FUBP3Q96I24 KIF21A-210ENST00000551264 3161 ntTSL 26.7□□□□□ -1.341e-6■■■□□ 19.2
FUBP3Q96I24 KIF21A-207ENST00000547733 3535 ntTSL 25.88□□□□□ -1.471e-6■■■□□ 19.2
FUBP3Q96I24 KIF21A-213ENST00000552961 4120 ntTSL 1 (best)4.6□□□□□ -1.671e-6■■■□□ 19.2
FUBP3Q96I24 KIF21A-214ENST00000636569 6157 ntTSL 53.96□□□□□ -1.781e-6■■■□□ 19.2
FUBP3Q96I24 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.82■□□□□ 0.69e-9■■■□□ 19
FUBP3Q96I24 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.77■□□□□ 0.279e-9■■■□□ 19
FUBP3Q96I24 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.56■□□□□ 0.249e-9■■■□□ 19
FUBP3Q96I24 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.96■□□□□ 0.159e-9■■■□□ 19
FUBP3Q96I24 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -09e-9■■■□□ 19
FUBP3Q96I24 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.259e-9■■■□□ 19
FUBP3Q96I24 CETN3-201ENST00000283122 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.369e-9■■■□□ 19
FUBP3Q96I24 CETN3-203ENST00000522083 1026 ntTSL 2 BASIC12.66□□□□□ -0.389e-9■■■□□ 19
FUBP3Q96I24 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.149e-9■■■□□ 19
FUBP3Q96I24 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.289e-9■■■□□ 19
FUBP3Q96I24 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.37□□□□□ -1.399e-9■■■□□ 19
FUBP3Q96I24 DDX18-205ENST00000476149 5674 ntTSL 24.99□□□□□ -1.619e-9■■■□□ 19
FUBP3Q96I24 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.463e-12■■■□□ 19
FUBP3Q96I24 CFI-207ENST00000618244 1345 ntTSL 5 BASIC8.68□□□□□ -1.026e-9■■■□□ 19
FUBP3Q96I24 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.256e-9■■■□□ 19
FUBP3Q96I24 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.296e-9■■■□□ 19
FUBP3Q96I24 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.486e-9■■■□□ 19
FUBP3Q96I24 TOMM20-201ENST00000366607 3387 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.677e-7■■■□□ 18.9
FUBP3Q96I24 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.851e-6■■■□□ 18.9
FUBP3Q96I24 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.961e-6■■■□□ 18.9
FUBP3Q96I24 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.557e-15■■■□□ 18.9
FUBP3Q96I24 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.577e-15■■■□□ 18.9
Retrieved 100 of 4,568 protein–RNA pairs in 273.2 ms