RNA–Protein interactions for RNA: ENST00000629785.2

DDX3X-218, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-218ENST00000629785 NISCHQ9Y2I1 1504 aa19.34■□□□□ 0.69
DDX3X-218ENST00000629785 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
DDX3X-218ENST00000629785 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
DDX3X-218ENST00000629785 DCAF8L2P0C7V8 631 aa17.13■□□□□ 0.33
DDX3X-218ENST00000629785 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
DDX3X-218ENST00000629785 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
DDX3X-218ENST00000629785 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
DDX3X-218ENST00000629785 HRCP23327 699 aa16.15■□□□□ 0.18
DDX3X-218ENST00000629785 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
DDX3X-218ENST00000629785 LOC105371045A0A1W2PR82 267 aa16.13■□□□□ 0.17
DDX3X-218ENST00000629785 MYO15BQ96JP2 1530 aa16.1■□□□□ 0.17
DDX3X-218ENST00000629785 CCDC180Q9P1Z9 1646 aa16.08■□□□□ 0.16
DDX3X-218ENST00000629785 FAM9AQ8IZU1 332 aaPredicted RBP16.02■□□□□ 0.16
DDX3X-218ENST00000629785 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
DDX3X-218ENST00000629785 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
DDX3X-218ENST00000629785 TRIM26Q12899 539 aaPredicted RBP15.78■□□□□ 0.12
DDX3X-218ENST00000629785 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
DDX3X-218ENST00000629785 TTBK1Q5TCY1 1321 aaPredicted RBP15.61■□□□□ 0.09
DDX3X-218ENST00000629785 SCRIBQ14160 1630 aa15.6■□□□□ 0.09
DDX3X-218ENST00000629785 ZEB1P37275 1124 aaPredicted RBP15.53■□□□□ 0.08
DDX3X-218ENST00000629785 ABCC9O60706 1549 aa15.51■□□□□ 0.07
DDX3X-218ENST00000629785 RSF1Q96T23 1441 aaPredicted RBP15.48■□□□□ 0.07
DDX3X-218ENST00000629785 CCER1Q8TC90 406 aaPredicted RBP15.41■□□□□ 0.06
DDX3X-218ENST00000629785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
DDX3X-218ENST00000629785 RB1CC1Q8TDY2 1594 aa15.3■□□□□ 0.04
DDX3X-218ENST00000629785 UBTFP17480 764 aaKnown RBP15.27■□□□□ 0.03
DDX3X-218ENST00000629785 CECR2Q9BXF3 1484 aa15.25■□□□□ 0.03
DDX3X-218ENST00000629785 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.03
DDX3X-218ENST00000629785 MROH2BQ7Z745 1585 aa15.12■□□□□ 0.01
DDX3X-218ENST00000629785 PABPN1Q86U42 306 aaKnown RBP eCLIP15.09■□□□□ 0.013e-7■■□□□ 14.4
DDX3X-218ENST00000629785 APLP2Q06481 763 aa15.06■□□□□ 0
DDX3X-218ENST00000629785 NACADO15069 1562 aa15.05■□□□□ -0
DDX3X-218ENST00000629785 WIZO95785 1651 aa15.03■□□□□ -0
DDX3X-218ENST00000629785 DIEXFQ68CQ4 756 aaKnown RBP15.02■□□□□ -0
DDX3X-218ENST00000629785 HNRNPUL2Q1KMD3 747 aaKnown RBP15.02■□□□□ -0
DDX3X-218ENST00000629785 CENPBP07199 599 aaPredicted RBP15.01□□□□□ -0.01
DDX3X-218ENST00000629785 YTHDC1Q96MU7 727 aaKnown RBP15.01□□□□□ -0.01
DDX3X-218ENST00000629785 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
DDX3X-218ENST00000629785 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
DDX3X-218ENST00000629785 PELP1Q8IZL8 1130 aaKnown RBP14.93□□□□□ -0.02
DDX3X-218ENST00000629785 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
DDX3X-218ENST00000629785 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
DDX3X-218ENST00000629785 CEP162Q5TB80 1403 aa14.87□□□□□ -0.03
DDX3X-218ENST00000629785 ACIN1Q9UKV3 1341 aaKnown RBP14.87□□□□□ -0.03
DDX3X-218ENST00000629785 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
DDX3X-218ENST00000629785 NEUROD1Q13562 356 aa14.86□□□□□ -0.03
DDX3X-218ENST00000629785 SOGA1O94964 1423 aa14.86□□□□□ -0.03
DDX3X-218ENST00000629785 GTF3C3Q9Y5Q9 886 aa14.86□□□□□ -0.03
DDX3X-218ENST00000629785 ZNF316A6NFI3 1004 aaPredicted RBP14.78□□□□□ -0.04
DDX3X-218ENST00000629785 TNIKQ9UKE5 1360 aa14.75□□□□□ -0.05
DDX3X-218ENST00000629785 ITGAEP38570 1179 aa14.72□□□□□ -0.05
DDX3X-218ENST00000629785 RUSC2Q8N2Y8 1516 aa14.72□□□□□ -0.05
DDX3X-218ENST00000629785 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.05
DDX3X-218ENST00000629785 WRNQ14191 1432 aaPredicted RBP eCLIP14.68□□□□□ -0.06
DDX3X-218ENST00000629785 GOLGA3Q08378 1498 aa14.67□□□□□ -0.06
DDX3X-218ENST00000629785 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
DDX3X-218ENST00000629785 EEA1Q15075 1411 aa14.65□□□□□ -0.06
DDX3X-218ENST00000629785 CLIP1P30622 1438 aa14.64□□□□□ -0.07
DDX3X-218ENST00000629785 ATP1B4Q9UN42 357 aaPredicted RBP14.64□□□□□ -0.07
DDX3X-218ENST00000629785 SMARCA2P51531 1590 aa14.62□□□□□ -0.07
DDX3X-218ENST00000629785 MIER1Q8N108 512 aa14.61□□□□□ -0.07
DDX3X-218ENST00000629785 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
DDX3X-218ENST00000629785 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
DDX3X-218ENST00000629785 EIF4G1Q04637 1599 aaKnown RBP14.48□□□□□ -0.09
DDX3X-218ENST00000629785 VPS8Q8N3P4 1428 aa14.44□□□□□ -0.1
DDX3X-218ENST00000629785 RAPGEF2Q9Y4G8 1499 aa14.44□□□□□ -0.1
DDX3X-218ENST00000629785 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
DDX3X-218ENST00000629785 P3H3Q8IVL6 736 aa14.4□□□□□ -0.1
DDX3X-218ENST00000629785 KANK4Q5T7N3 995 aaPredicted RBP14.39□□□□□ -0.11
DDX3X-218ENST00000629785 SYNJ1O43426 1573 aa14.38□□□□□ -0.11
DDX3X-218ENST00000629785 ATAD2BQ9ULI0 1458 aa14.37□□□□□ -0.11
DDX3X-218ENST00000629785 UNC13AQ9UPW8 1703 aa14.33□□□□□ -0.12
DDX3X-218ENST00000629785 BCANQ96GW7 911 aa14.28□□□□□ -0.12
DDX3X-218ENST00000629785 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
DDX3X-218ENST00000629785 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
DDX3X-218ENST00000629785 KIF21BO75037 1637 aa14.25□□□□□ -0.13
DDX3X-218ENST00000629785 HIRIP3Q9BW71 556 aaPredicted RBP14.23□□□□□ -0.13
DDX3X-218ENST00000629785 DDX10Q13206 875 aaKnown RBP14.23□□□□□ -0.13
DDX3X-218ENST00000629785 DHX57Q6P158 1386 aaKnown RBP14.22□□□□□ -0.13
DDX3X-218ENST00000629785 MYT1Q01538 1121 aa14.21□□□□□ -0.13
DDX3X-218ENST00000629785 CCNB3Q8WWL7 1395 aa14.2□□□□□ -0.14
DDX3X-218ENST00000629785 NEFLP07196 543 aa14.19□□□□□ -0.14
DDX3X-218ENST00000629785 CLSPNQ9HAW4 1339 aa14.19□□□□□ -0.14
DDX3X-218ENST00000629785 SIN3AQ96ST3 1273 aa14.17□□□□□ -0.14
DDX3X-218ENST00000629785 CUX2O14529 1486 aa14.15□□□□□ -0.15
DDX3X-218ENST00000629785 ARAP1Q96P48 1450 aa14.13□□□□□ -0.15
DDX3X-218ENST00000629785 SUPT16HQ9Y5B9 1047 aaKnown RBP14.12□□□□□ -0.15
DDX3X-218ENST00000629785 RAB3GAP2Q9H2M9 1393 aa14.11□□□□□ -0.15
DDX3X-218ENST00000629785 KCNH8Q96L42 1107 aa14.11□□□□□ -0.15
DDX3X-218ENST00000629785 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
DDX3X-218ENST00000629785 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
DDX3X-218ENST00000629785 ANP32CO43423 234 aa14.09□□□□□ -0.15
DDX3X-218ENST00000629785 FKBP8Q14318 412 aa14.09□□□□□ -0.15
DDX3X-218ENST00000629785 CARMIL1Q5VZK9 1371 aa14.09□□□□□ -0.15
DDX3X-218ENST00000629785 TRIM52Q96A61 297 aa14.09□□□□□ -0.15
DDX3X-218ENST00000629785 PRXQ9BXM0 1461 aa14.08□□□□□ -0.16
DDX3X-218ENST00000629785 ARID3CA6NKF2 412 aa14.07□□□□□ -0.16
DDX3X-218ENST00000629785 CNGB1Q14028 1251 aaPredicted RBP14.05□□□□□ -0.16
DDX3X-218ENST00000629785 CUX1P39880 1505 aa14.04□□□□□ -0.16
DDX3X-218ENST00000629785 ERICH3Q5RHP9 1530 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms