RNA–Protein interactions for RNA: ENST00000442934.6

MSI2-204, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,624 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-204ENST00000442934 NISCHQ9Y2I1 1504 aa36.26■■■■□ 3.4
MSI2-204ENST00000442934 CCDC180Q9P1Z9 1646 aa31.7■■■□□ 2.67
MSI2-204ENST00000442934 ZCCHC6Q5VYS8 1495 aaKnown RBP30.51■■■□□ 2.48
MSI2-204ENST00000442934 DCAF1Q9Y4B6 1507 aa30.1■■■□□ 2.41
MSI2-204ENST00000442934 MYO15BQ96JP2 1530 aa29.72■■■□□ 2.35
MSI2-204ENST00000442934 DCAF8L2P0C7V8 631 aa29.68■■■□□ 2.34
MSI2-204ENST00000442934 ABCC9O60706 1549 aa29.64■■■□□ 2.34
MSI2-204ENST00000442934 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
MSI2-204ENST00000442934 NACADO15069 1562 aa29.45■■■□□ 2.3
MSI2-204ENST00000442934 RB1CC1Q8TDY2 1594 aa29.15■■■□□ 2.26
MSI2-204ENST00000442934 SCRIBQ14160 1630 aa29■■■□□ 2.23
MSI2-204ENST00000442934 UNC13AQ9UPW8 1703 aa28.56■■■□□ 2.16
MSI2-204ENST00000442934 SUPT5HO00267 1087 aaKnown RBP28.4■■■□□ 2.14
MSI2-204ENST00000442934 BICRAQ9NZM4 1560 aa28.21■■■□□ 2.11
MSI2-204ENST00000442934 RSF1Q96T23 1441 aaPredicted RBP28.12■■■□□ 2.09
MSI2-204ENST00000442934 CECR2Q9BXF3 1484 aa28.07■■■□□ 2.08
MSI2-204ENST00000442934 BAZ1AQ9NRL2 1556 aaPredicted RBP28.04■■■□□ 2.08
MSI2-204ENST00000442934 MROH2BQ7Z745 1585 aa27.97■■■□□ 2.07
MSI2-204ENST00000442934 PABPN1Q86U42 306 aaKnown RBP eCLIP27.89■■■□□ 2.051e-5■□□□□ 8.6
MSI2-204ENST00000442934 SMARCA4P51532 1647 aa27.88■■■□□ 2.05
MSI2-204ENST00000442934 WIZO95785 1651 aa27.77■■■□□ 2.04
MSI2-204ENST00000442934 PEG3Q9GZU2 1588 aa27.59■■■□□ 2.01
MSI2-204ENST00000442934 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
MSI2-204ENST00000442934 SMARCA2P51531 1590 aa27.41■■□□□ 1.98
MSI2-204ENST00000442934 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
MSI2-204ENST00000442934 ATAD2BQ9ULI0 1458 aa27.35■■□□□ 1.97
MSI2-204ENST00000442934 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
MSI2-204ENST00000442934 BAZ1BQ9UIG0 1483 aaKnown RBP27.21■■□□□ 1.95
MSI2-204ENST00000442934 CCDC88BA6NC98 1476 aa27.18■■□□□ 1.94
MSI2-204ENST00000442934 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
MSI2-204ENST00000442934 NCAPD3P42695 1498 aa27.12■■□□□ 1.93
MSI2-204ENST00000442934 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
MSI2-204ENST00000442934 TRIM41Q8WV44 630 aa26.78■■□□□ 1.88
MSI2-204ENST00000442934 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
MSI2-204ENST00000442934 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
MSI2-204ENST00000442934 CFTRP13569 1480 aa26.54■■□□□ 1.84
MSI2-204ENST00000442934 WRNQ14191 1432 aaPredicted RBP eCLIP26.49■■□□□ 1.83
MSI2-204ENST00000442934 CADPSQ9ULU8 1353 aa26.4■■□□□ 1.82
MSI2-204ENST00000442934 SYNJ1O43426 1573 aa26.38■■□□□ 1.81
MSI2-204ENST00000442934 TOP2BQ02880 1626 aa26.33■■□□□ 1.81
MSI2-204ENST00000442934 BIVM-ERCC5R4GMW8 1640 aa26.33■■□□□ 1.81
MSI2-204ENST00000442934 EEA1Q15075 1411 aa26.28■■□□□ 1.8
MSI2-204ENST00000442934 LAMC3Q9Y6N6 1575 aa26.23■■□□□ 1.79
MSI2-204ENST00000442934 LOC105371045A0A1W2PR82 267 aa26.17■■□□□ 1.78
MSI2-204ENST00000442934 FAM9AQ8IZU1 332 aaPredicted RBP26.17■■□□□ 1.78
MSI2-204ENST00000442934 CUX1P39880 1505 aa26.16■■□□□ 1.78
MSI2-204ENST00000442934 SOGA1O94964 1423 aa26.12■■□□□ 1.77
MSI2-204ENST00000442934 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
MSI2-204ENST00000442934 NESP48681 1621 aa26.05■■□□□ 1.76
MSI2-204ENST00000442934 RUSC2Q8N2Y8 1516 aa26■■□□□ 1.75
MSI2-204ENST00000442934 PDS5BQ9NTI5 1447 aa25.97■■□□□ 1.75
MSI2-204ENST00000442934 CSRNP3Q8WYN3 585 aa25.97■■□□□ 1.75
MSI2-204ENST00000442934 DNMBPQ6XZF7 1577 aa25.97■■□□□ 1.75
MSI2-204ENST00000442934 CEP164Q9UPV0 1460 aa25.96■■□□□ 1.75
MSI2-204ENST00000442934 DNAJC5BQ9UF47 199 aa25.95■■□□□ 1.74
MSI2-204ENST00000442934 KIF21BO75037 1637 aa25.92■■□□□ 1.74
MSI2-204ENST00000442934 FGD5Q6ZNL6 1462 aa25.86■■□□□ 1.73
MSI2-204ENST00000442934 GOLGA3Q08378 1498 aa25.85■■□□□ 1.73
MSI2-204ENST00000442934 TOPBP1Q92547 1522 aa25.85■■□□□ 1.73
MSI2-204ENST00000442934 KIF21AQ7Z4S6 1674 aa25.85■■□□□ 1.73
MSI2-204ENST00000442934 KIF27Q86VH2 1401 aa25.83■■□□□ 1.73
MSI2-204ENST00000442934 TNIKQ9UKE5 1360 aa25.78■■□□□ 1.72
MSI2-204ENST00000442934 URB2Q14146 1524 aaKnown RBP25.76■■□□□ 1.71
MSI2-204ENST00000442934 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
MSI2-204ENST00000442934 POLA1P09884 1462 aaPredicted RBP25.73■■□□□ 1.71
MSI2-204ENST00000442934 EHMT2Q96KQ7 1210 aa25.71■■□□□ 1.71
MSI2-204ENST00000442934 CUX2O14529 1486 aa25.7■■□□□ 1.7
MSI2-204ENST00000442934 PRXQ9BXM0 1461 aa25.68■■□□□ 1.7
MSI2-204ENST00000442934 ABCA10Q8WWZ4 1543 aa25.68■■□□□ 1.7
MSI2-204ENST00000442934 WDR97A6NE52 1622 aa25.64■■□□□ 1.7
MSI2-204ENST00000442934 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
MSI2-204ENST00000442934 CEP162Q5TB80 1403 aa25.62■■□□□ 1.69
MSI2-204ENST00000442934 RAPGEF2Q9Y4G8 1499 aa25.62■■□□□ 1.69
MSI2-204ENST00000442934 UBTFP17480 764 aaKnown RBP25.6■■□□□ 1.69
MSI2-204ENST00000442934 RAD54L2Q9Y4B4 1467 aa25.57■■□□□ 1.68
MSI2-204ENST00000442934 IGF1RP08069 1367 aa25.53■■□□□ 1.68
MSI2-204ENST00000442934 WDR62O43379 1518 aa25.52■■□□□ 1.68
MSI2-204ENST00000442934 ABCA5Q8WWZ7 1642 aa25.49■■□□□ 1.67
MSI2-204ENST00000442934 TARBP1Q13395 1621 aaKnown RBP25.49■■□□□ 1.67
MSI2-204ENST00000442934 CUL7Q14999 1698 aa25.48■■□□□ 1.67
MSI2-204ENST00000442934 ERCC6Q03468 1493 aa25.45■■□□□ 1.67
MSI2-204ENST00000442934 CARMIL1Q5VZK9 1371 aa25.42■■□□□ 1.66
MSI2-204ENST00000442934 THOC2Q8NI27 1593 aaKnown RBP25.41■■□□□ 1.66
MSI2-204ENST00000442934 CLIP1P30622 1438 aa25.4■■□□□ 1.66
MSI2-204ENST00000442934 GAPVD1Q14C86 1478 aa25.37■■□□□ 1.65
MSI2-204ENST00000442934 IFT140Q96RY7 1462 aa25.35■■□□□ 1.65
MSI2-204ENST00000442934 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
MSI2-204ENST00000442934 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
MSI2-204ENST00000442934 VPS8Q8N3P4 1428 aa25.22■■□□□ 1.63
MSI2-204ENST00000442934 TRIM26Q12899 539 aaPredicted RBP25.22■■□□□ 1.63
MSI2-204ENST00000442934 CTTNBP2Q8WZ74 1663 aa25.21■■□□□ 1.63
MSI2-204ENST00000442934 GRIN2BQ13224 1484 aa25.18■■□□□ 1.62
MSI2-204ENST00000442934 ADAMTS12P58397 1594 aa25.14■■□□□ 1.62
MSI2-204ENST00000442934 ARAP1Q96P48 1450 aa25.14■■□□□ 1.61
MSI2-204ENST00000442934 PCGF6Q9BYE7 350 aa25.13■■□□□ 1.61
MSI2-204ENST00000442934 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.611e-6■■■■■ 27.9
MSI2-204ENST00000442934 EIF4G3O43432 1585 aaKnown RBP25.12■■□□□ 1.61
MSI2-204ENST00000442934 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
MSI2-204ENST00000442934 ARHGAP35Q9NRY4 1499 aa25.11■■□□□ 1.61
MSI2-204ENST00000442934 ZNF608Q9ULD9 1512 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms