RNA–Protein interactions for RNA: ENST00000568107.2

GAN-202, Transcript of gigaxonin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAN, Length 15,244 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAN-202ENST00000568107 DCAF8L2P0C7V8 631 aa14.18□□□□□ -0.14
GAN-202ENST00000568107 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
GAN-202ENST00000568107 NISCHQ9Y2I1 1504 aa13.17□□□□□ -0.3
GAN-202ENST00000568107 SHROOM4Q9ULL8 1493 aa13.07□□□□□ -0.32
GAN-202ENST00000568107 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.32
GAN-202ENST00000568107 APLP2Q06481 763 aa12.72□□□□□ -0.37
GAN-202ENST00000568107 FAM9AQ8IZU1 332 aaPredicted RBP12.61□□□□□ -0.39
GAN-202ENST00000568107 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
GAN-202ENST00000568107 TTBK1Q5TCY1 1321 aaPredicted RBP12.54□□□□□ -0.4
GAN-202ENST00000568107 RANGAP1P46060 587 aaPredicted RBP12.48□□□□□ -0.41
GAN-202ENST00000568107 ATP1B4Q9UN42 357 aaPredicted RBP12.41□□□□□ -0.42
GAN-202ENST00000568107 PCGF6Q9BYE7 350 aa12.35□□□□□ -0.43
GAN-202ENST00000568107 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
GAN-202ENST00000568107 UBTFP17480 764 aaKnown RBP12.22□□□□□ -0.45
GAN-202ENST00000568107 CCER1Q8TC90 406 aaPredicted RBP12.19□□□□□ -0.46
GAN-202ENST00000568107 ERICH6Q7L0X2 663 aa12.1□□□□□ -0.47
GAN-202ENST00000568107 ZEB1P37275 1124 aaPredicted RBP12.09□□□□□ -0.47
GAN-202ENST00000568107 CENPBP07199 599 aaPredicted RBP12.08□□□□□ -0.48
GAN-202ENST00000568107 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
GAN-202ENST00000568107 MYT1LQ9UL68 1186 aa11.99□□□□□ -0.49
GAN-202ENST00000568107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.95□□□□□ -0.5
GAN-202ENST00000568107 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
GAN-202ENST00000568107 YTHDC1Q96MU7 727 aaKnown RBP11.93□□□□□ -0.5
GAN-202ENST00000568107 NEFLP07196 543 aa11.92□□□□□ -0.5
GAN-202ENST00000568107 ITGAEP38570 1179 aa11.89□□□□□ -0.51
GAN-202ENST00000568107 POLR3GLQ9BT43 218 aa11.83□□□□□ -0.52
GAN-202ENST00000568107 CHIC1Q5VXU3 224 aa11.8□□□□□ -0.52
GAN-202ENST00000568107 TRIM26Q12899 539 aaPredicted RBP11.77□□□□□ -0.52
GAN-202ENST00000568107 CNGB1Q14028 1251 aaPredicted RBP11.73□□□□□ -0.53
GAN-202ENST00000568107 LOC105371045A0A1W2PR82 267 aa11.71□□□□□ -0.53
GAN-202ENST00000568107 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
GAN-202ENST00000568107 DAXXQ9UER7 740 aaPredicted RBP11.65□□□□□ -0.54
GAN-202ENST00000568107 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
GAN-202ENST00000568107 ABCC9O60706 1549 aa11.57□□□□□ -0.56
GAN-202ENST00000568107 HRCP23327 699 aa11.56□□□□□ -0.56
GAN-202ENST00000568107 FAM50AQ14320 339 aaKnown RBP11.56□□□□□ -0.56
GAN-202ENST00000568107 TRIM52Q96A61 297 aa11.51□□□□□ -0.57
GAN-202ENST00000568107 FBLN2P98095 1184 aa11.47□□□□□ -0.57
GAN-202ENST00000568107 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
GAN-202ENST00000568107 MYT1Q01538 1121 aa11.44□□□□□ -0.58
GAN-202ENST00000568107 CLSPNQ9HAW4 1339 aa11.43□□□□□ -0.58
GAN-202ENST00000568107 DIEXFQ68CQ4 756 aaKnown RBP11.38□□□□□ -0.59
GAN-202ENST00000568107 ZNF316A6NFI3 1004 aaPredicted RBP11.38□□□□□ -0.59
GAN-202ENST00000568107 ZNF326Q5BKZ1 582 aaKnown RBP11.37□□□□□ -0.59
GAN-202ENST00000568107 BCANQ96GW7 911 aa11.34□□□□□ -0.59
GAN-202ENST00000568107 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
GAN-202ENST00000568107 P3H3Q8IVL6 736 aa11.31□□□□□ -0.6
GAN-202ENST00000568107 ARID3CA6NKF2 412 aa11.3□□□□□ -0.6
GAN-202ENST00000568107 ANP32CO43423 234 aa11.28□□□□□ -0.6
GAN-202ENST00000568107 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
GAN-202ENST00000568107 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
GAN-202ENST00000568107 ZNF777Q9ULD5 760 aaPredicted RBP11.24□□□□□ -0.61
GAN-202ENST00000568107 BCL11AQ9H165 835 aa11.23□□□□□ -0.61
GAN-202ENST00000568107 NEFMP07197 916 aa11.21□□□□□ -0.62
GAN-202ENST00000568107 CANXP27824 592 aaKnown RBP11.19□□□□□ -0.62
GAN-202ENST00000568107 PLPPR3Q6T4P5 718 aa11.17□□□□□ -0.62
GAN-202ENST00000568107 ESF1Q9H501 851 aaKnown RBP11.16□□□□□ -0.62
GAN-202ENST00000568107 SCRIBQ14160 1630 aa11.15□□□□□ -0.63
GAN-202ENST00000568107 CSRNP3Q8WYN3 585 aa11.14□□□□□ -0.63
GAN-202ENST00000568107 CDK11AQ9UQ88 783 aaPredicted RBP11.14□□□□□ -0.63
GAN-202ENST00000568107 STAG3Q9UJ98 1225 aa11.12□□□□□ -0.63
GAN-202ENST00000568107 CHGAP10645 457 aaKnown RBP11.11□□□□□ -0.63
GAN-202ENST00000568107 GTF3C3Q9Y5Q9 886 aa11.07□□□□□ -0.64
GAN-202ENST00000568107 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
GAN-202ENST00000568107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11□□□□□ -0.65
GAN-202ENST00000568107 TONSLQ96HA7 1378 aa10.98□□□□□ -0.65
GAN-202ENST00000568107 CHIC2Q9UKJ5 165 aa10.97□□□□□ -0.65
GAN-202ENST00000568107 NPM2Q86SE8 214 aaKnown RBP10.95□□□□□ -0.66
GAN-202ENST00000568107 SALL2Q9Y467 1007 aaPredicted RBP10.94□□□□□ -0.66
GAN-202ENST00000568107 SCAF1Q9H7N4 1312 aaKnown RBP10.93□□□□□ -0.66
GAN-202ENST00000568107 CHMP7Q8WUX9 453 aaPredicted RBP10.93□□□□□ -0.66
GAN-202ENST00000568107 ANP32AP39687 249 aaKnown RBP10.93□□□□□ -0.66
GAN-202ENST00000568107 FAM9BQ8IZU0 186 aa10.92□□□□□ -0.66
GAN-202ENST00000568107 TSPY4P0CV99 314 aa10.91□□□□□ -0.66
GAN-202ENST00000568107 TSPY10P0CW01 314 aa10.91□□□□□ -0.66
GAN-202ENST00000568107 KDM2AQ9Y2K7 1162 aa10.9□□□□□ -0.66
GAN-202ENST00000568107 HSP90AA1P07900 732 aaKnown RBP10.9□□□□□ -0.66
GAN-202ENST00000568107 DDX10Q13206 875 aaKnown RBP10.89□□□□□ -0.67
GAN-202ENST00000568107 HNRNPUQ00839 825 aaKnown RBP eCLIP10.88□□□□□ -0.67
GAN-202ENST00000568107 SENP3Q9H4L4 574 aaPredicted RBP10.87□□□□□ -0.67
GAN-202ENST00000568107 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
GAN-202ENST00000568107 FKBP8Q14318 412 aa10.85□□□□□ -0.67
GAN-202ENST00000568107 PLEKHG5O94827 1062 aa10.85□□□□□ -0.67
GAN-202ENST00000568107 WDR43Q15061 677 aaKnown RBP eCLIP10.84□□□□□ -0.67
GAN-202ENST00000568107 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
GAN-202ENST00000568107 A0A0G2JS52 829 aa10.84□□□□□ -0.67
GAN-202ENST00000568107 MTUS2Q5JR59 1369 aa10.84□□□□□ -0.67
GAN-202ENST00000568107 UPF2Q9HAU5 1272 aaKnown RBP10.83□□□□□ -0.68
GAN-202ENST00000568107 ZCCHC6Q5VYS8 1495 aaKnown RBP10.83□□□□□ -0.68
GAN-202ENST00000568107 KCNH8Q96L42 1107 aa10.83□□□□□ -0.68
GAN-202ENST00000568107 CCDC180Q9P1Z9 1646 aa10.82□□□□□ -0.68
GAN-202ENST00000568107 ANP32BQ92688 251 aaKnown RBP10.81□□□□□ -0.68
GAN-202ENST00000568107 ZBTB7CA1YPR0 619 aa10.81□□□□□ -0.68
GAN-202ENST00000568107 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.79□□□□□ -0.68
GAN-202ENST00000568107 C14orf37Q86TY3 774 aa10.79□□□□□ -0.68
GAN-202ENST00000568107 RB1CC1Q8TDY2 1594 aa10.78□□□□□ -0.68
GAN-202ENST00000568107 HIRIP3Q9BW71 556 aaPredicted RBP10.78□□□□□ -0.68
GAN-202ENST00000568107 RRP7BPQ9NSQ0 103 aa10.77□□□□□ -0.69
GAN-202ENST00000568107 PPP1R15AO75807 674 aaPredicted RBP10.76□□□□□ -0.69
GAN-202ENST00000568107 CCDC136Q96JN2 1154 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms