RNA–Protein interactions for RNA: ENST00000416426.6

MSI2-203, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-203ENST00000416426 NISCHQ9Y2I1 1504 aa40.43■■■■■ 4.06
MSI2-203ENST00000416426 CCDC180Q9P1Z9 1646 aa35.07■■■■□ 3.21
MSI2-203ENST00000416426 ZCCHC6Q5VYS8 1495 aaKnown RBP34.07■■■■□ 3.05
MSI2-203ENST00000416426 DCAF1Q9Y4B6 1507 aa33.47■■■□□ 2.95
MSI2-203ENST00000416426 SHROOM4Q9ULL8 1493 aa33.21■■■□□ 2.91
MSI2-203ENST00000416426 ABCC9O60706 1549 aa33.18■■■□□ 2.9
MSI2-203ENST00000416426 DCAF8L2P0C7V8 631 aa33.1■■■□□ 2.89
MSI2-203ENST00000416426 MYO15BQ96JP2 1530 aa32.9■■■□□ 2.86
MSI2-203ENST00000416426 NACADO15069 1562 aa32.53■■■□□ 2.8
MSI2-203ENST00000416426 SCRIBQ14160 1630 aa32.27■■■□□ 2.76
MSI2-203ENST00000416426 SUPT5HO00267 1087 aaKnown RBP32.17■■■□□ 2.74
MSI2-203ENST00000416426 RB1CC1Q8TDY2 1594 aa32.13■■■□□ 2.73
MSI2-203ENST00000416426 UNC13AQ9UPW8 1703 aa31.57■■■□□ 2.64
MSI2-203ENST00000416426 RSF1Q96T23 1441 aaPredicted RBP31.54■■■□□ 2.64
MSI2-203ENST00000416426 CECR2Q9BXF3 1484 aa31.38■■■□□ 2.61
MSI2-203ENST00000416426 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.59
MSI2-203ENST00000416426 BICRAQ9NZM4 1560 aa31.21■■■□□ 2.59
MSI2-203ENST00000416426 BAZ1AQ9NRL2 1556 aaPredicted RBP31.17■■■□□ 2.58
MSI2-203ENST00000416426 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
MSI2-203ENST00000416426 PABPN1Q86U42 306 aaKnown RBP eCLIP31.04■■■□□ 2.561e-5■□□□□ 8.6
MSI2-203ENST00000416426 WIZO95785 1651 aa31.03■■■□□ 2.56
MSI2-203ENST00000416426 SMARCA4P51532 1647 aa31■■■□□ 2.55
MSI2-203ENST00000416426 TOP2AP11388 1531 aaKnown RBP30.73■■■□□ 2.51
MSI2-203ENST00000416426 DNAJC5BQ9UF47 199 aa30.64■■■□□ 2.5
MSI2-203ENST00000416426 PEG3Q9GZU2 1588 aa30.62■■■□□ 2.49
MSI2-203ENST00000416426 SMARCA2P51531 1590 aa30.46■■■□□ 2.47
MSI2-203ENST00000416426 EIF4G1Q04637 1599 aaKnown RBP30.44■■■□□ 2.46
MSI2-203ENST00000416426 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
MSI2-203ENST00000416426 ATAD2BQ9ULI0 1458 aa30.36■■■□□ 2.45
MSI2-203ENST00000416426 TRIM41Q8WV44 630 aa30.22■■■□□ 2.43
MSI2-203ENST00000416426 BAZ1BQ9UIG0 1483 aaKnown RBP30.18■■■□□ 2.42
MSI2-203ENST00000416426 HMGXB3Q12766 1538 aa30.03■■■□□ 2.4
MSI2-203ENST00000416426 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
MSI2-203ENST00000416426 CC2D2AQ9P2K1 1620 aa29.97■■■□□ 2.39
MSI2-203ENST00000416426 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
MSI2-203ENST00000416426 LOC105371045A0A1W2PR82 267 aa29.9■■■□□ 2.38
MSI2-203ENST00000416426 FAM9AQ8IZU1 332 aaPredicted RBP29.66■■■□□ 2.34
MSI2-203ENST00000416426 WRNQ14191 1432 aaPredicted RBP eCLIP29.64■■■□□ 2.34
MSI2-203ENST00000416426 SYNJ1O43426 1573 aa29.54■■■□□ 2.32
MSI2-203ENST00000416426 EEA1Q15075 1411 aa29.48■■■□□ 2.31
MSI2-203ENST00000416426 CFTRP13569 1480 aa29.48■■■□□ 2.31
MSI2-203ENST00000416426 SOGA1O94964 1423 aa29.43■■■□□ 2.3
MSI2-203ENST00000416426 PRDM2Q13029 1718 aa29.41■■■□□ 2.3
MSI2-203ENST00000416426 TOP2BQ02880 1626 aa29.39■■■□□ 2.3
MSI2-203ENST00000416426 BIVM-ERCC5R4GMW8 1640 aa29.37■■■□□ 2.29
MSI2-203ENST00000416426 RUSC2Q8N2Y8 1516 aa29.31■■■□□ 2.28
MSI2-203ENST00000416426 CADPSQ9ULU8 1353 aa29.27■■■□□ 2.28
MSI2-203ENST00000416426 CSRNP3Q8WYN3 585 aa29.24■■■□□ 2.27
MSI2-203ENST00000416426 CUX1P39880 1505 aa29.2■■■□□ 2.26
MSI2-203ENST00000416426 EHMT2Q96KQ7 1210 aa29.18■■■□□ 2.26
MSI2-203ENST00000416426 KIF21BO75037 1637 aa29.1■■■□□ 2.25
MSI2-203ENST00000416426 TNIKQ9UKE5 1360 aa29.09■■■□□ 2.25
MSI2-203ENST00000416426 GOLGA3Q08378 1498 aa29.08■■■□□ 2.25
MSI2-203ENST00000416426 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
MSI2-203ENST00000416426 PCGF6Q9BYE7 350 aa28.97■■■□□ 2.23
MSI2-203ENST00000416426 CEP162Q5TB80 1403 aa28.95■■■□□ 2.22
MSI2-203ENST00000416426 FANCD2Q9BXW9 1451 aa28.94■■■□□ 2.22
MSI2-203ENST00000416426 LAMC3Q9Y6N6 1575 aa28.92■■■□□ 2.22
MSI2-203ENST00000416426 TRIM26Q12899 539 aaPredicted RBP28.91■■■□□ 2.22
MSI2-203ENST00000416426 NESP48681 1621 aa28.86■■■□□ 2.21
MSI2-203ENST00000416426 UBTFP17480 764 aaKnown RBP28.85■■■□□ 2.21
MSI2-203ENST00000416426 KIF27Q86VH2 1401 aa28.85■■■□□ 2.21
MSI2-203ENST00000416426 ERICH3Q5RHP9 1530 aa28.82■■■□□ 2.2
MSI2-203ENST00000416426 PRXQ9BXM0 1461 aa28.81■■■□□ 2.2
MSI2-203ENST00000416426 RAPGEF2Q9Y4G8 1499 aa28.81■■■□□ 2.2
MSI2-203ENST00000416426 DNMBPQ6XZF7 1577 aa28.79■■■□□ 2.2
MSI2-203ENST00000416426 FGD5Q6ZNL6 1462 aa28.79■■■□□ 2.2
MSI2-203ENST00000416426 TOPBP1Q92547 1522 aa28.7■■■□□ 2.19
MSI2-203ENST00000416426 CUX2O14529 1486 aa28.67■■■□□ 2.18
MSI2-203ENST00000416426 PDS5BQ9NTI5 1447 aa28.65■■■□□ 2.18
MSI2-203ENST00000416426 CLIP1P30622 1438 aa28.62■■■□□ 2.17
MSI2-203ENST00000416426 URB2Q14146 1524 aaKnown RBP28.59■■■□□ 2.17
MSI2-203ENST00000416426 POLA1P09884 1462 aaPredicted RBP28.58■■■□□ 2.17
MSI2-203ENST00000416426 ERCC6Q03468 1493 aa28.58■■■□□ 2.17
MSI2-203ENST00000416426 ABCA10Q8WWZ4 1543 aa28.57■■■□□ 2.16
MSI2-203ENST00000416426 HRCP23327 699 aa28.57■■■□□ 2.16
MSI2-203ENST00000416426 IGF1RP08069 1367 aa28.57■■■□□ 2.16
MSI2-203ENST00000416426 KIF21AQ7Z4S6 1674 aa28.55■■■□□ 2.16
MSI2-203ENST00000416426 RAD54L2Q9Y4B4 1467 aa28.49■■■□□ 2.15
MSI2-203ENST00000416426 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
MSI2-203ENST00000416426 VPS8Q8N3P4 1428 aa28.45■■■□□ 2.14
MSI2-203ENST00000416426 CARMIL1Q5VZK9 1371 aa28.41■■■□□ 2.14
MSI2-203ENST00000416426 PPARGC1BQ86YN6 1023 aaKnown RBP28.4■■■□□ 2.14
MSI2-203ENST00000416426 CUL7Q14999 1698 aa28.33■■■□□ 2.13
MSI2-203ENST00000416426 ARAP1Q96P48 1450 aa28.32■■■□□ 2.12
MSI2-203ENST00000416426 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
MSI2-203ENST00000416426 MRC2Q9UBG0 1479 aa28.28■■■□□ 2.12
MSI2-203ENST00000416426 TARBP1Q13395 1621 aaKnown RBP28.27■■■□□ 2.12
MSI2-203ENST00000416426 ARHGAP35Q9NRY4 1499 aa28.22■■■□□ 2.11
MSI2-203ENST00000416426 RANGAP1P46060 587 aaPredicted RBP28.21■■■□□ 2.11
MSI2-203ENST00000416426 THOC2Q8NI27 1593 aaKnown RBP28.19■■■□□ 2.1
MSI2-203ENST00000416426 GAPVD1Q14C86 1478 aa28.18■■■□□ 2.1
MSI2-203ENST00000416426 TDRD9Q8NDG6 1382 aaKnown RBP28.14■■■□□ 2.1
MSI2-203ENST00000416426 WDR62O43379 1518 aa28.14■■■□□ 2.09
MSI2-203ENST00000416426 CTTNBP2Q8WZ74 1663 aa28.09■■■□□ 2.09
MSI2-203ENST00000416426 APLP2Q06481 763 aa28.07■■■□□ 2.08
MSI2-203ENST00000416426 TTBK1Q5TCY1 1321 aaPredicted RBP28.06■■■□□ 2.08
MSI2-203ENST00000416426 PBRM1Q86U86 1689 aa28.04■■■□□ 2.08
MSI2-203ENST00000416426 IFT140Q96RY7 1462 aa28.01■■■□□ 2.07
MSI2-203ENST00000416426 EFCAB5A4FU69 1503 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms