RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 NISCHQ9Y2I1 1504 aa9.29□□□□□ -0.92
U2SURP-208ENST00000473835 HRCP23327 699 aa8.11□□□□□ -1.11
U2SURP-208ENST00000473835 CCDC180Q9P1Z9 1646 aa8.07□□□□□ -1.12
U2SURP-208ENST00000473835 MYO15BQ96JP2 1530 aa8.05□□□□□ -1.12
U2SURP-208ENST00000473835 SHROOM4Q9ULL8 1493 aa7.94□□□□□ -1.14
U2SURP-208ENST00000473835 PPARGC1BQ86YN6 1023 aaKnown RBP7.93□□□□□ -1.14
U2SURP-208ENST00000473835 DCAF1Q9Y4B6 1507 aa7.89□□□□□ -1.15
U2SURP-208ENST00000473835 ZCCHC6Q5VYS8 1495 aaKnown RBP7.88□□□□□ -1.15
U2SURP-208ENST00000473835 CHIC1Q5VXU3 224 aa7.87□□□□□ -1.15
U2SURP-208ENST00000473835 SUPT5HO00267 1087 aaKnown RBP7.86□□□□□ -1.15
U2SURP-208ENST00000473835 PCGF6Q9BYE7 350 aa7.85□□□□□ -1.15
U2SURP-208ENST00000473835 PELP1Q8IZL8 1130 aaKnown RBP7.72□□□□□ -1.17
U2SURP-208ENST00000473835 SCAF1Q9H7N4 1312 aaKnown RBP7.7□□□□□ -1.18
U2SURP-208ENST00000473835 LOC105371045A0A1W2PR82 267 aa7.64□□□□□ -1.19
U2SURP-208ENST00000473835 TRIM26Q12899 539 aaPredicted RBP7.63□□□□□ -1.19
U2SURP-208ENST00000473835 ZEB1P37275 1124 aaPredicted RBP7.52□□□□□ -1.21
U2SURP-208ENST00000473835 NACADO15069 1562 aa7.5□□□□□ -1.21
U2SURP-208ENST00000473835 ABCC9O60706 1549 aa7.46□□□□□ -1.22
U2SURP-208ENST00000473835 ACIN1Q9UKV3 1341 aaKnown RBP7.45□□□□□ -1.22
U2SURP-208ENST00000473835 NEUROD1Q13562 356 aa7.45□□□□□ -1.22
U2SURP-208ENST00000473835 MYT1Q01538 1121 aa7.38□□□□□ -1.23
U2SURP-208ENST00000473835 RSF1Q96T23 1441 aaPredicted RBP7.37□□□□□ -1.23
U2SURP-208ENST00000473835 RB1CC1Q8TDY2 1594 aa7.36□□□□□ -1.23
U2SURP-208ENST00000473835 GTF3C3Q9Y5Q9 886 aa7.36□□□□□ -1.23
U2SURP-208ENST00000473835 DCAF8L2P0C7V8 631 aa7.29□□□□□ -1.24
U2SURP-208ENST00000473835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.29□□□□□ -1.24
U2SURP-208ENST00000473835 TRIM41Q8WV44 630 aa7.29□□□□□ -1.24
U2SURP-208ENST00000473835 DIEXFQ68CQ4 756 aaKnown RBP7.28□□□□□ -1.24
U2SURP-208ENST00000473835 EIF4G1Q04637 1599 aaKnown RBP7.27□□□□□ -1.24
U2SURP-208ENST00000473835 FAM9AQ8IZU1 332 aaPredicted RBP7.24□□□□□ -1.25
U2SURP-208ENST00000473835 CENPBP07199 599 aaPredicted RBP7.23□□□□□ -1.25
U2SURP-208ENST00000473835 WRNQ14191 1432 aaPredicted RBP eCLIP7.23□□□□□ -1.25
U2SURP-208ENST00000473835 SCRIBQ14160 1630 aa7.21□□□□□ -1.26
U2SURP-208ENST00000473835 CCER1Q8TC90 406 aaPredicted RBP7.2□□□□□ -1.26
U2SURP-208ENST00000473835 BAZ1AQ9NRL2 1556 aaPredicted RBP7.17□□□□□ -1.26
U2SURP-208ENST00000473835 EHMT2Q96KQ7 1210 aa7.16□□□□□ -1.26
U2SURP-208ENST00000473835 MROH2BQ7Z745 1585 aa7.16□□□□□ -1.26
U2SURP-208ENST00000473835 CECR2Q9BXF3 1484 aa7.16□□□□□ -1.26
U2SURP-208ENST00000473835 ZNF316A6NFI3 1004 aaPredicted RBP7.15□□□□□ -1.26
U2SURP-208ENST00000473835 PEG3Q9GZU2 1588 aa7.14□□□□□ -1.27
U2SURP-208ENST00000473835 MIER1Q8N108 512 aa7.14□□□□□ -1.27
U2SURP-208ENST00000473835 WIZO95785 1651 aa7.13□□□□□ -1.27
U2SURP-208ENST00000473835 BICRAQ9NZM4 1560 aa7.13□□□□□ -1.27
U2SURP-208ENST00000473835 CEP162Q5TB80 1403 aa7.12□□□□□ -1.27
U2SURP-208ENST00000473835 CCDC88BA6NC98 1476 aa7.09□□□□□ -1.27
U2SURP-208ENST00000473835 YTHDC1Q96MU7 727 aaKnown RBP7.09□□□□□ -1.27
U2SURP-208ENST00000473835 ABCC8Q09428 1581 aa7.09□□□□□ -1.27
U2SURP-208ENST00000473835 TNIKQ9UKE5 1360 aa7.07□□□□□ -1.28
U2SURP-208ENST00000473835 SUPT16HQ9Y5B9 1047 aaKnown RBP7.05□□□□□ -1.28
U2SURP-208ENST00000473835 SOGA1O94964 1423 aa7.05□□□□□ -1.28
U2SURP-208ENST00000473835 TOP2AP11388 1531 aaKnown RBP7.04□□□□□ -1.28
U2SURP-208ENST00000473835 SMARCA4P51532 1647 aa7.04□□□□□ -1.28
U2SURP-208ENST00000473835 TSHZ2Q9NRE2 1034 aa7.04□□□□□ -1.28
U2SURP-208ENST00000473835 RUSC2Q8N2Y8 1516 aa7.03□□□□□ -1.28
U2SURP-208ENST00000473835 ANP32EQ9BTT0 268 aa7.01□□□□□ -1.29
U2SURP-208ENST00000473835 TTBK1Q5TCY1 1321 aaPredicted RBP7.01□□□□□ -1.29
U2SURP-208ENST00000473835 BCL11AQ9H165 835 aa7□□□□□ -1.29
U2SURP-208ENST00000473835 SMARCA2P51531 1590 aa7□□□□□ -1.29
U2SURP-208ENST00000473835 CLSPNQ9HAW4 1339 aa6.99□□□□□ -1.29
U2SURP-208ENST00000473835 NCAPD3P42695 1498 aa6.98□□□□□ -1.29
U2SURP-208ENST00000473835 EEA1Q15075 1411 aa6.97□□□□□ -1.29
U2SURP-208ENST00000473835 HMGXB3Q12766 1538 aa6.97□□□□□ -1.29
U2SURP-208ENST00000473835 GOLGA3Q08378 1498 aa6.97□□□□□ -1.29
U2SURP-208ENST00000473835 ATAD2BQ9ULI0 1458 aa6.97□□□□□ -1.29
U2SURP-208ENST00000473835 CSRNP3Q8WYN3 585 aa6.96□□□□□ -1.3
U2SURP-208ENST00000473835 UNC13AQ9UPW8 1703 aa6.96□□□□□ -1.3
U2SURP-208ENST00000473835 KIF21BO75037 1637 aa6.95□□□□□ -1.3
U2SURP-208ENST00000473835 DHX57Q6P158 1386 aaKnown RBP6.94□□□□□ -1.3
U2SURP-208ENST00000473835 CLIP1P30622 1438 aa6.94□□□□□ -1.3
U2SURP-208ENST00000473835 VPS8Q8N3P4 1428 aa6.93□□□□□ -1.3
U2SURP-208ENST00000473835 HNRNPUL2Q1KMD3 747 aaKnown RBP6.91□□□□□ -1.3
U2SURP-208ENST00000473835 CUX2O14529 1486 aa6.9□□□□□ -1.3
U2SURP-208ENST00000473835 SYNJ1O43426 1573 aa6.9□□□□□ -1.31
U2SURP-208ENST00000473835 CEP164Q9UPV0 1460 aa6.89□□□□□ -1.31
U2SURP-208ENST00000473835 KCNH8Q96L42 1107 aa6.89□□□□□ -1.31
U2SURP-208ENST00000473835 BAZ1BQ9UIG0 1483 aaKnown RBP6.88□□□□□ -1.31
U2SURP-208ENST00000473835 RAPGEF2Q9Y4G8 1499 aa6.86□□□□□ -1.31
U2SURP-208ENST00000473835 MAPKBP1O60336 1514 aa6.85□□□□□ -1.31
U2SURP-208ENST00000473835 UBTFP17480 764 aaKnown RBP6.85□□□□□ -1.31
U2SURP-208ENST00000473835 MSH5O43196 834 aa6.85□□□□□ -1.31
U2SURP-208ENST00000473835 RRBP1Q9P2E9 1410 aaKnown RBP6.85□□□□□ -1.31
U2SURP-208ENST00000473835 ARAP1Q96P48 1450 aa6.84□□□□□ -1.31
U2SURP-208ENST00000473835 RBM19Q9Y4C8 960 aaKnown RBP6.83□□□□□ -1.32
U2SURP-208ENST00000473835 CFTRP13569 1480 aa6.81□□□□□ -1.32
U2SURP-208ENST00000473835 KANK4Q5T7N3 995 aaPredicted RBP6.79□□□□□ -1.32
U2SURP-208ENST00000473835 BCANQ96GW7 911 aa6.79□□□□□ -1.32
U2SURP-208ENST00000473835 PABPN1Q86U42 306 aaKnown RBP eCLIP6.78□□□□□ -1.32
U2SURP-208ENST00000473835 FKBP8Q14318 412 aa6.78□□□□□ -1.32
U2SURP-208ENST00000473835 ERICH3Q5RHP9 1530 aa6.78□□□□□ -1.32
U2SURP-208ENST00000473835 WDR97A6NE52 1622 aa6.78□□□□□ -1.32
U2SURP-208ENST00000473835 PRXQ9BXM0 1461 aa6.77□□□□□ -1.33
U2SURP-208ENST00000473835 PPP1R15AO75807 674 aaPredicted RBP6.77□□□□□ -1.33
U2SURP-208ENST00000473835 TOP2BQ02880 1626 aa6.76□□□□□ -1.33
U2SURP-208ENST00000473835 BIVM-ERCC5R4GMW8 1640 aa6.75□□□□□ -1.33
U2SURP-208ENST00000473835 FANCIQ9NVI1 1328 aa6.75□□□□□ -1.33
U2SURP-208ENST00000473835 PRKCSHP14314 528 aaPredicted RBP6.74□□□□□ -1.33
U2SURP-208ENST00000473835 RAB3GAP2Q9H2M9 1393 aa6.73□□□□□ -1.33
U2SURP-208ENST00000473835 CCNB3Q8WWL7 1395 aa6.72□□□□□ -1.33
U2SURP-208ENST00000473835 ITGAEP38570 1179 aa6.72□□□□□ -1.33
U2SURP-208ENST00000473835 CADPSQ9ULU8 1353 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms