RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 PELP1Q8IZL8 1130 aaKnown RBP22.16■■□□□ 1.14
DDX3X-201ENST00000399959 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
DDX3X-201ENST00000399959 SUPT5HO00267 1087 aaKnown RBP21.89■■□□□ 1.1
DDX3X-201ENST00000399959 MYT1Q01538 1121 aa21.88■■□□□ 1.09
DDX3X-201ENST00000399959 CENPBP07199 599 aaPredicted RBP21.43■■□□□ 1.02
DDX3X-201ENST00000399959 PCGF6Q9BYE7 350 aa21.42■■□□□ 1.02
DDX3X-201ENST00000399959 ERICH6Q7L0X2 663 aa21.28■■□□□ 1
DDX3X-201ENST00000399959 ZEB1P37275 1124 aaPredicted RBP21.21■□□□□ 0.99
DDX3X-201ENST00000399959 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
DDX3X-201ENST00000399959 EHMT2Q96KQ7 1210 aa21.18■□□□□ 0.98
DDX3X-201ENST00000399959 CCER1Q8TC90 406 aaPredicted RBP21.09■□□□□ 0.97
DDX3X-201ENST00000399959 NISCHQ9Y2I1 1504 aa20.97■□□□□ 0.95
DDX3X-201ENST00000399959 APLP2Q06481 763 aa20.81■□□□□ 0.92
DDX3X-201ENST00000399959 HRCP23327 699 aa20.78■□□□□ 0.92
DDX3X-201ENST00000399959 YTHDC1Q96MU7 727 aaKnown RBP20.73■□□□□ 0.91
DDX3X-201ENST00000399959 NEFLP07196 543 aa20.66■□□□□ 0.9
DDX3X-201ENST00000399959 TTBK1Q5TCY1 1321 aaPredicted RBP20.65■□□□□ 0.9
DDX3X-201ENST00000399959 FAM9AQ8IZU1 332 aaPredicted RBP20.64■□□□□ 0.89
DDX3X-201ENST00000399959 TRIM26Q12899 539 aaPredicted RBP20.39■□□□□ 0.85
DDX3X-201ENST00000399959 PPARGC1BQ86YN6 1023 aaKnown RBP20.27■□□□□ 0.84
DDX3X-201ENST00000399959 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
DDX3X-201ENST00000399959 DAXXQ9UER7 740 aaPredicted RBP20.02■□□□□ 0.8
DDX3X-201ENST00000399959 GTF3C3Q9Y5Q9 886 aa19.98■□□□□ 0.79
DDX3X-201ENST00000399959 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
DDX3X-201ENST00000399959 RTL5Q5HYW3 569 aaPredicted RBP19.97■□□□□ 0.79
DDX3X-201ENST00000399959 DIEXFQ68CQ4 756 aaKnown RBP19.95■□□□□ 0.78
DDX3X-201ENST00000399959 UBTFP17480 764 aaKnown RBP19.89■□□□□ 0.77
DDX3X-201ENST00000399959 LOC105371045A0A1W2PR82 267 aa19.74■□□□□ 0.75
DDX3X-201ENST00000399959 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
DDX3X-201ENST00000399959 ATP1B4Q9UN42 357 aaPredicted RBP19.69■□□□□ 0.74
DDX3X-201ENST00000399959 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
DDX3X-201ENST00000399959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
DDX3X-201ENST00000399959 ZNF316A6NFI3 1004 aaPredicted RBP19.61■□□□□ 0.73
DDX3X-201ENST00000399959 BCANQ96GW7 911 aa19.59■□□□□ 0.73
DDX3X-201ENST00000399959 HNRNPUL2Q1KMD3 747 aaKnown RBP19.54■□□□□ 0.72
DDX3X-201ENST00000399959 CDK11AQ9UQ88 783 aaPredicted RBP19.49■□□□□ 0.71
DDX3X-201ENST00000399959 ITGAEP38570 1179 aa19.41■□□□□ 0.7
DDX3X-201ENST00000399959 POLR3GLQ9BT43 218 aa19.39■□□□□ 0.69
DDX3X-201ENST00000399959 CLSPNQ9HAW4 1339 aa19.33■□□□□ 0.68
DDX3X-201ENST00000399959 EIF5BO60841 1220 aaKnown RBP19.3■□□□□ 0.68
DDX3X-201ENST00000399959 SCAF1Q9H7N4 1312 aaKnown RBP19.29■□□□□ 0.68
DDX3X-201ENST00000399959 CNGB1Q14028 1251 aaPredicted RBP19.28■□□□□ 0.68
DDX3X-201ENST00000399959 MYT1LQ9UL68 1186 aa19.24■□□□□ 0.67
DDX3X-201ENST00000399959 ANP32AP39687 249 aaKnown RBP19.19■□□□□ 0.66
DDX3X-201ENST00000399959 GLIPR1L2Q4G1C9 344 aa19.18■□□□□ 0.66
DDX3X-201ENST00000399959 NEUROD1Q13562 356 aa19.17■□□□□ 0.66
DDX3X-201ENST00000399959 ANP32CO43423 234 aa19.16■□□□□ 0.66
DDX3X-201ENST00000399959 FKBP8Q14318 412 aa19.04■□□□□ 0.64
DDX3X-201ENST00000399959 NPM2Q86SE8 214 aaKnown RBP18.95■□□□□ 0.62
DDX3X-201ENST00000399959 ANP32EQ9BTT0 268 aa18.94■□□□□ 0.62
DDX3X-201ENST00000399959 NBR1Q14596 966 aa18.9■□□□□ 0.62
DDX3X-201ENST00000399959 SLC24A1O60721 1099 aa18.9■□□□□ 0.62
DDX3X-201ENST00000399959 FAM50AQ14320 339 aaKnown RBP18.82■□□□□ 0.6
DDX3X-201ENST00000399959 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
DDX3X-201ENST00000399959 ZBTB47Q9UFB7 747 aaPredicted RBP18.79■□□□□ 0.6
DDX3X-201ENST00000399959 ANP32BQ92688 251 aaKnown RBP18.76■□□□□ 0.59
DDX3X-201ENST00000399959 BCL11AQ9H165 835 aa18.76■□□□□ 0.59
DDX3X-201ENST00000399959 SLC4A1APQ9BWU0 796 aaKnown RBP18.72■□□□□ 0.59
DDX3X-201ENST00000399959 TRIM52Q96A61 297 aa18.71■□□□□ 0.59
DDX3X-201ENST00000399959 CANXP27824 592 aaKnown RBP18.66■□□□□ 0.58
DDX3X-201ENST00000399959 HNRNPUQ00839 825 aaKnown RBP eCLIP18.65■□□□□ 0.58
DDX3X-201ENST00000399959 MIER1Q8N108 512 aa18.64■□□□□ 0.57
DDX3X-201ENST00000399959 CCDC136Q96JN2 1154 aa18.57■□□□□ 0.56
DDX3X-201ENST00000399959 ZNF326Q5BKZ1 582 aaKnown RBP18.56■□□□□ 0.56
DDX3X-201ENST00000399959 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
DDX3X-201ENST00000399959 UPF2Q9HAU5 1272 aaKnown RBP18.52■□□□□ 0.56
DDX3X-201ENST00000399959 ARXQ96QS3 562 aa18.5■□□□□ 0.55
DDX3X-201ENST00000399959 HSP90AA1P07900 732 aaKnown RBP18.49■□□□□ 0.55
DDX3X-201ENST00000399959 FAM9BQ8IZU0 186 aa18.45■□□□□ 0.54
DDX3X-201ENST00000399959 IRX6P78412 446 aaPredicted RBP18.44■□□□□ 0.54
DDX3X-201ENST00000399959 RTN4Q9NQC3 1192 aaKnown RBP18.43■□□□□ 0.54
DDX3X-201ENST00000399959 NEFMP07197 916 aa18.4■□□□□ 0.54
DDX3X-201ENST00000399959 DDRGK1Q96HY6 314 aa18.39■□□□□ 0.53
DDX3X-201ENST00000399959 ERICH6BQ5W0A0 696 aa18.38■□□□□ 0.53
DDX3X-201ENST00000399959 SUPT16HQ9Y5B9 1047 aaKnown RBP18.35■□□□□ 0.53
DDX3X-201ENST00000399959 TNNT2P45379 298 aaPredicted RBP18.34■□□□□ 0.53
DDX3X-201ENST00000399959 TONSLQ96HA7 1378 aa18.34■□□□□ 0.53
DDX3X-201ENST00000399959 TRIM44Q96DX7 344 aaPredicted RBP18.33■□□□□ 0.52
DDX3X-201ENST00000399959 PPM1GO15355 546 aaPredicted RBP18.32■□□□□ 0.52
DDX3X-201ENST00000399959 DEKP35659 375 aaKnown RBP18.31■□□□□ 0.52
DDX3X-201ENST00000399959 NOP58Q9Y2X3 529 aaKnown RBP18.3■□□□□ 0.52
DDX3X-201ENST00000399959 NAP1L5Q96NT1 182 aaPredicted RBP18.28■□□□□ 0.52
DDX3X-201ENST00000399959 CSRNP3Q8WYN3 585 aa18.26■□□□□ 0.51
DDX3X-201ENST00000399959 CCDC180Q9P1Z9 1646 aa18.26■□□□□ 0.51
DDX3X-201ENST00000399959 MRS2Q9HD23 443 aa18.25■□□□□ 0.51
DDX3X-201ENST00000399959 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.24■□□□□ 0.51
DDX3X-201ENST00000399959 BECN1Q14457 450 aa18.22■□□□□ 0.51
DDX3X-201ENST00000399959 SALL2Q9Y467 1007 aaPredicted RBP18.22■□□□□ 0.51
DDX3X-201ENST00000399959 TMC1Q8TDI8 760 aa18.2■□□□□ 0.5
DDX3X-201ENST00000399959 LAS1LQ9Y4W2 734 aaKnown RBP18.19■□□□□ 0.5
DDX3X-201ENST00000399959 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
DDX3X-201ENST00000399959 PPP4R2Q9NY27 417 aa18.14■□□□□ 0.49
DDX3X-201ENST00000399959 MYO15BQ96JP2 1530 aa18.13■□□□□ 0.49
DDX3X-201ENST00000399959 GOLGA6L22H0YM25 854 aa18.07■□□□□ 0.48
DDX3X-201ENST00000399959 HIRIP3Q9BW71 556 aaPredicted RBP18.05■□□□□ 0.48
DDX3X-201ENST00000399959 CDK11BP21127 795 aaKnown RBP18.05■□□□□ 0.48
DDX3X-201ENST00000399959 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.03■□□□□ 0.48
DDX3X-201ENST00000399959 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
DDX3X-201ENST00000399959 DNTTIP2Q5QJE6 756 aaKnown RBP18.01■□□□□ 0.47
DDX3X-201ENST00000399959 PTMAP06454 111 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms