RNA–Protein interactions for RNA: ENST00000493598.6

U2SURP-214, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 5 BASIC

Gene U2SURP, Length 3,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-214ENST00000493598 NISCHQ9Y2I1 1504 aa11.71□□□□□ -0.54
U2SURP-214ENST00000493598 AEBP2Q6ZN18 517 aaPredicted RBP11.55□□□□□ -0.56
U2SURP-214ENST00000493598 CCDC180Q9P1Z9 1646 aa10.86□□□□□ -0.67
U2SURP-214ENST00000493598 ABCC9O60706 1549 aa10.76□□□□□ -0.69
U2SURP-214ENST00000493598 CHIC1Q5VXU3 224 aa10.62□□□□□ -0.71
U2SURP-214ENST00000493598 RB1CC1Q8TDY2 1594 aa10.36□□□□□ -0.75
U2SURP-214ENST00000493598 DNAJC5BQ9UF47 199 aa10.34□□□□□ -0.75
U2SURP-214ENST00000493598 NACADO15069 1562 aa10.26□□□□□ -0.77
U2SURP-214ENST00000493598 MYO15BQ96JP2 1530 aa10.16□□□□□ -0.78
U2SURP-214ENST00000493598 UNC13AQ9UPW8 1703 aa10.14□□□□□ -0.79
U2SURP-214ENST00000493598 SHROOM4Q9ULL8 1493 aa10.14□□□□□ -0.79
U2SURP-214ENST00000493598 BICRAQ9NZM4 1560 aa10.07□□□□□ -0.8
U2SURP-214ENST00000493598 CC2D2AQ9P2K1 1620 aa9.87□□□□□ -0.83
U2SURP-214ENST00000493598 DCAF1Q9Y4B6 1507 aa9.86□□□□□ -0.83
U2SURP-214ENST00000493598 DNAJC5Q9H3Z4 198 aa9.86□□□□□ -0.83
U2SURP-214ENST00000493598 CECR2Q9BXF3 1484 aa9.83□□□□□ -0.84
U2SURP-214ENST00000493598 PABPN1Q86U42 306 aaKnown RBP eCLIP9.81□□□□□ -0.84
U2SURP-214ENST00000493598 EIF4G1Q04637 1599 aaKnown RBP9.8□□□□□ -0.84
U2SURP-214ENST00000493598 CUX2O14529 1486 aa9.69□□□□□ -0.86
U2SURP-214ENST00000493598 SENP3Q9H4L4 574 aaPredicted RBP9.69□□□□□ -0.86
U2SURP-214ENST00000493598 ZCCHC6Q5VYS8 1495 aaKnown RBP9.68□□□□□ -0.86
U2SURP-214ENST00000493598 PHF23Q9BUL5 403 aaPredicted RBP9.67□□□□□ -0.86
U2SURP-214ENST00000493598 SCRIBQ14160 1630 aa9.55□□□□□ -0.88
U2SURP-214ENST00000493598 DCAF8L2P0C7V8 631 aa9.46□□□□□ -0.9
U2SURP-214ENST00000493598 NCAPD3P42695 1498 aa9.42□□□□□ -0.9
U2SURP-214ENST00000493598 HMGXB3Q12766 1538 aa9.39□□□□□ -0.91
U2SURP-214ENST00000493598 THOC2Q8NI27 1593 aaKnown RBP9.39□□□□□ -0.91
U2SURP-214ENST00000493598 ERCC6Q03468 1493 aa9.34□□□□□ -0.91
U2SURP-214ENST00000493598 SMARCA2P51531 1590 aa9.31□□□□□ -0.92
U2SURP-214ENST00000493598 LAMC3Q9Y6N6 1575 aa9.29□□□□□ -0.92
U2SURP-214ENST00000493598 PEG3Q9GZU2 1588 aa9.29□□□□□ -0.92
U2SURP-214ENST00000493598 ATAD2BQ9ULI0 1458 aa9.27□□□□□ -0.93
U2SURP-214ENST00000493598 SMARCA4P51532 1647 aa9.23□□□□□ -0.93
U2SURP-214ENST00000493598 FOXD1Q16676 465 aa9.19□□□□□ -0.94
U2SURP-214ENST00000493598 KIF21AQ7Z4S6 1674 aa9.19□□□□□ -0.94
U2SURP-214ENST00000493598 WDR62O43379 1518 aa9.18□□□□□ -0.94
U2SURP-214ENST00000493598 NESP48681 1621 aa9.16□□□□□ -0.94
U2SURP-214ENST00000493598 BAZ1AQ9NRL2 1556 aaPredicted RBP9.14□□□□□ -0.95
U2SURP-214ENST00000493598 PDS5BQ9NTI5 1447 aa9.13□□□□□ -0.95
U2SURP-214ENST00000493598 MRC2Q9UBG0 1479 aa9.12□□□□□ -0.95
U2SURP-214ENST00000493598 BAZ1BQ9UIG0 1483 aaKnown RBP9.12□□□□□ -0.95
U2SURP-214ENST00000493598 CADPSQ9ULU8 1353 aa9.01□□□□□ -0.97
U2SURP-214ENST00000493598 RIMBP3CA6NJZ7 1639 aa9□□□□□ -0.97
U2SURP-214ENST00000493598 RIMBP3BA6NNM3 1639 aa9□□□□□ -0.97
U2SURP-214ENST00000493598 RIMBP3Q9UFD9 1639 aa9□□□□□ -0.97
U2SURP-214ENST00000493598 TRIM41Q8WV44 630 aa9□□□□□ -0.97
U2SURP-214ENST00000493598 PRDM2Q13029 1718 aa8.97□□□□□ -0.97
U2SURP-214ENST00000493598 CEP164Q9UPV0 1460 aa8.96□□□□□ -0.97
U2SURP-214ENST00000493598 MROH2BQ7Z745 1585 aa8.93□□□□□ -0.98
U2SURP-214ENST00000493598 OSCARQ8IYS5 282 aa8.93□□□□□ -0.98
U2SURP-214ENST00000493598 CFTRP13569 1480 aa8.91□□□□□ -0.98
U2SURP-214ENST00000493598 ARHGEF11O15085 1522 aa8.91□□□□□ -0.98
U2SURP-214ENST00000493598 FANCD2Q9BXW9 1451 aa8.9□□□□□ -0.99
U2SURP-214ENST00000493598 URB2Q14146 1524 aaKnown RBP8.87□□□□□ -0.99
U2SURP-214ENST00000493598 IFT140Q96RY7 1462 aa8.86□□□□□ -0.99
U2SURP-214ENST00000493598 RSF1Q96T23 1441 aaPredicted RBP8.85□□□□□ -0.99
U2SURP-214ENST00000493598 WDR97A6NE52 1622 aa8.85□□□□□ -0.99
U2SURP-214ENST00000493598 ARAP1Q96P48 1450 aa8.8□□□□□ -1
U2SURP-214ENST00000493598 WIZO95785 1651 aa8.8□□□□□ -1
U2SURP-214ENST00000493598 TOP2AP11388 1531 aaKnown RBP8.79□□□□□ -1
U2SURP-214ENST00000493598 ABCC8Q09428 1581 aa8.79□□□□□ -1
U2SURP-214ENST00000493598 EIF4G3O43432 1585 aaKnown RBP8.79□□□□□ -1
U2SURP-214ENST00000493598 CHD1O14646 1710 aa8.78□□□□□ -1
U2SURP-214ENST00000493598 CLASP1Q7Z460 1538 aa8.77□□□□□ -1.01
U2SURP-214ENST00000493598 TARBP1Q13395 1621 aaKnown RBP8.76□□□□□ -1.01
U2SURP-214ENST00000493598 POTEDQ86YR6 584 aa8.75□□□□□ -1.01
U2SURP-214ENST00000493598 DNMBPQ6XZF7 1577 aa8.74□□□□□ -1.01
U2SURP-214ENST00000493598 ZNF608Q9ULD9 1512 aaPredicted RBP8.73□□□□□ -1.01
U2SURP-214ENST00000493598 TOPBP1Q92547 1522 aa8.72□□□□□ -1.01
U2SURP-214ENST00000493598 SYNJ1O43426 1573 aa8.67□□□□□ -1.02
U2SURP-214ENST00000493598 MAGI1Q96QZ7 1491 aaPredicted RBP8.64□□□□□ -1.03
U2SURP-214ENST00000493598 PIAS4Q8N2W9 510 aaPredicted RBP8.61□□□□□ -1.03
U2SURP-214ENST00000493598 POLA1P09884 1462 aaPredicted RBP8.59□□□□□ -1.03
U2SURP-214ENST00000493598 CYB5RLQ6IPT4 315 aa8.59□□□□□ -1.03
U2SURP-214ENST00000493598 PPP6R1Q9UPN7 881 aa8.58□□□□□ -1.04
U2SURP-214ENST00000493598 CCDC88BA6NC98 1476 aa8.57□□□□□ -1.04
U2SURP-214ENST00000493598 SYNJ2O15056 1496 aa8.57□□□□□ -1.04
U2SURP-214ENST00000493598 SHROOM2Q13796 1616 aa8.56□□□□□ -1.04
U2SURP-214ENST00000493598 PBRM1Q86U86 1689 aa8.55□□□□□ -1.04
U2SURP-214ENST00000493598 AQRO60306 1485 aaKnown RBP eCLIP8.55□□□□□ -1.045e-7■■■■□ 21.2
U2SURP-214ENST00000493598 SNAPC4Q5SXM2 1469 aa8.55□□□□□ -1.04
U2SURP-214ENST00000493598 ADRA2BP18089 450 aa8.55□□□□□ -1.04
U2SURP-214ENST00000493598 KIF13AQ9H1H9 1805 aa8.55□□□□□ -1.04
U2SURP-214ENST00000493598 TRHP20396 242 aaPredicted RBP8.55□□□□□ -1.04
U2SURP-214ENST00000493598 GRIN2BQ13224 1484 aa8.54□□□□□ -1.04
U2SURP-214ENST00000493598 GAPVD1Q14C86 1478 aa8.53□□□□□ -1.04
U2SURP-214ENST00000493598 ABCA5Q8WWZ7 1642 aa8.52□□□□□ -1.05
U2SURP-214ENST00000493598 SOGA1O94964 1423 aa8.48□□□□□ -1.05
U2SURP-214ENST00000493598 MSH5O43196 834 aa8.48□□□□□ -1.05
U2SURP-214ENST00000493598 MAPKBP1O60336 1514 aa8.47□□□□□ -1.05
U2SURP-214ENST00000493598 NUP160Q12769 1436 aa8.47□□□□□ -1.05
U2SURP-214ENST00000493598 FGD5Q6ZNL6 1462 aa8.46□□□□□ -1.05
U2SURP-214ENST00000493598 CEP170Q5SW79 1584 aa8.46□□□□□ -1.06
U2SURP-214ENST00000493598 RAD54L2Q9Y4B4 1467 aa8.46□□□□□ -1.06
U2SURP-214ENST00000493598 ABCA10Q8WWZ4 1543 aa8.45□□□□□ -1.06
U2SURP-214ENST00000493598 ADAMTS12P58397 1594 aa8.45□□□□□ -1.06
U2SURP-214ENST00000493598 CUX1P39880 1505 aa8.44□□□□□ -1.06
U2SURP-214ENST00000493598 GRIN2AQ12879 1464 aa8.42□□□□□ -1.06
U2SURP-214ENST00000493598 DIP2BQ9P265 1576 aa8.42□□□□□ -1.06
U2SURP-214ENST00000493598 ABCC10Q5T3U5 1492 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms