RNA–Protein interactions for RNA: ENST00000534166.1

EPB41L2-231, Transcript of erythrocyte membrane protein band 4.1 like 2, human

TSL 3

Gene EPB41L2, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPB41L2-231	ENST00000534166	AEBP2	Q6ZN18	517 aa	Predicted RBP	24.16	■■□□□ 1.46
EPB41L2-231	ENST00000534166	CHIC1	Q5VXU3	224 aa		22.71	■■□□□ 1.23
EPB41L2-231	ENST00000534166	SENP3	Q9H4L4	574 aa	Predicted RBP	20.79	■□□□□ 0.92
EPB41L2-231	ENST00000534166	PHF23	Q9BUL5	403 aa	Predicted RBP	20.41	■□□□□ 0.86
EPB41L2-231	ENST00000534166	FOXD1	Q16676	465 aa		19.34	■□□□□ 0.69
EPB41L2-231	ENST00000534166	POTED	Q86YR6	584 aa		18.48	■□□□□ 0.55
EPB41L2-231	ENST00000534166	MSH5	O43196	834 aa		18.34	■□□□□ 0.53
EPB41L2-231	ENST00000534166	PIAS4	Q8N2W9	510 aa	Predicted RBP	18.05	■□□□□ 0.48
EPB41L2-231	ENST00000534166	PLPPR3	Q6T4P5	718 aa		17.97	■□□□□ 0.47
EPB41L2-231	ENST00000534166	PPP6R1	Q9UPN7	881 aa		17.75	■□□□□ 0.43
EPB41L2-231	ENST00000534166	ADRA2B	P18089	450 aa		17.71	■□□□□ 0.43
EPB41L2-231	ENST00000534166	DMRT2	Q9Y5R5	561 aa		16.39	■□□□□ 0.21
EPB41L2-231	ENST00000534166	MAPK8IP2	Q13387	824 aa	Predicted RBP	16.36	■□□□□ 0.21
EPB41L2-231	ENST00000534166	SCAF1	Q9H7N4	1312 aa	Known RBP	16.32	■□□□□ 0.2
EPB41L2-231	ENST00000534166	CACNB1	Q02641	598 aa	Predicted RBP	15.97	■□□□□ 0.15
EPB41L2-231	ENST00000534166	DCAF8L1	A6NGE4	600 aa		15.81	■□□□□ 0.12
EPB41L2-231	ENST00000534166	PPP4R3CP	Q6ZMV5	832 aa		15.66	■□□□□ 0.1
EPB41L2-231	ENST00000534166	HOXD11	P31277	338 aa	Predicted RBP	15.62	■□□□□ 0.09
EPB41L2-231	ENST00000534166	RNF39	Q9H2S5	420 aa		15.55	■□□□□ 0.08
EPB41L2-231	ENST00000534166	CNKSR2	Q8WXI2	1034 aa		15.49	■□□□□ 0.07
EPB41L2-231	ENST00000534166	RNF216	Q9NWF9	866 aa	Predicted RBP	15.43	■□□□□ 0.06
EPB41L2-231	ENST00000534166	C1QBP	Q07021	282 aa	Known RBP	15.35	■□□□□ 0.05
EPB41L2-231	ENST00000534166	DNAJC5B	Q9UF47	199 aa		15.19	■□□□□ 0.02
EPB41L2-231	ENST00000534166	NCBP3	Q53F19	620 aa	Known RBP	15.02	■□□□□ -0
EPB41L2-231	ENST00000534166	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.96	□□□□□ -0.01	1e-6	■■■■□ 24.2
EPB41L2-231	ENST00000534166	NPM3	O75607	178 aa	Known RBP	14.76	□□□□□ -0.05
EPB41L2-231	ENST00000534166	KCNA4	P22459	653 aa		14.75	□□□□□ -0.05
EPB41L2-231	ENST00000534166		U3KPZ7	1027 aa	Predicted RBP	14.53	□□□□□ -0.08
EPB41L2-231	ENST00000534166	CAPN15	O75808	1086 aa		14.5	□□□□□ -0.09
EPB41L2-231	ENST00000534166	DSG3	P32926	999 aa		14.44	□□□□□ -0.1
EPB41L2-231	ENST00000534166	POTEH	Q6S545	545 aa		14.44	□□□□□ -0.1
EPB41L2-231	ENST00000534166	SPINK5	Q9NQ38	1064 aa	Predicted RBP	14.42	□□□□□ -0.1
EPB41L2-231	ENST00000534166	APLP2	Q06481	763 aa		14.23	□□□□□ -0.13
EPB41L2-231	ENST00000534166	TRH	P20396	242 aa	Predicted RBP	14.16	□□□□□ -0.14
EPB41L2-231	ENST00000534166	ZNF219	Q9P2Y4	722 aa	Predicted RBP	14.15	□□□□□ -0.14
EPB41L2-231	ENST00000534166	SLC4A2	P04920	1241 aa		14.11	□□□□□ -0.15
EPB41L2-231	ENST00000534166	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	14.09	□□□□□ -0.15
EPB41L2-231	ENST00000534166	ABCB7	O75027	752 aa		14.09	□□□□□ -0.15
EPB41L2-231	ENST00000534166	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.09	□□□□□ -0.15
EPB41L2-231	ENST00000534166	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.97	□□□□□ -0.17
EPB41L2-231	ENST00000534166	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.9	□□□□□ -0.18
EPB41L2-231	ENST00000534166	RBM42	Q9BTD8	480 aa	Known RBP	13.88	□□□□□ -0.19
EPB41L2-231	ENST00000534166	NISCH	Q9Y2I1	1504 aa		13.75	□□□□□ -0.21
EPB41L2-231	ENST00000534166	MYCN	P04198	464 aa	Predicted RBP	13.68	□□□□□ -0.22
EPB41L2-231	ENST00000534166	CHRDL2	Q6WN34	429 aa		13.67	□□□□□ -0.22
EPB41L2-231	ENST00000534166	POLA2	Q14181	598 aa		13.66	□□□□□ -0.22
EPB41L2-231	ENST00000534166	ZBTB22	O15209	634 aa		13.63	□□□□□ -0.23
EPB41L2-231	ENST00000534166	FOXD4L1	Q9NU39	408 aa		13.59	□□□□□ -0.23
EPB41L2-231	ENST00000534166	AKT1S1	Q96B36	256 aa		13.44	□□□□□ -0.26
EPB41L2-231	ENST00000534166	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.44	□□□□□ -0.26
EPB41L2-231	ENST00000534166	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.4	□□□□□ -0.26
EPB41L2-231	ENST00000534166	SP7	Q8TDD2	431 aa	Predicted RBP	13.36	□□□□□ -0.27
EPB41L2-231	ENST00000534166	REM2	Q8IYK8	340 aa	Predicted RBP	13.28	□□□□□ -0.28
EPB41L2-231	ENST00000534166	OSCAR	Q8IYS5	282 aa		13.25	□□□□□ -0.29
EPB41L2-231	ENST00000534166	PIP4P2	Q8N4L2	257 aa		13.24	□□□□□ -0.29
EPB41L2-231	ENST00000534166	CSRNP3	Q8WYN3	585 aa		13.16	□□□□□ -0.3
EPB41L2-231	ENST00000534166	HAX1	O00165	279 aa		13.15	□□□□□ -0.3
EPB41L2-231	ENST00000534166	PITPNM1	O00562	1244 aa		13.14	□□□□□ -0.31
EPB41L2-231	ENST00000534166	EHMT2	Q96KQ7	1210 aa		13.14	□□□□□ -0.31
EPB41L2-231	ENST00000534166	FXR2	P51116	673 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
EPB41L2-231	ENST00000534166	ATXN8OS	P0DMR3	200 aa		13.08	□□□□□ -0.32
EPB41L2-231	ENST00000534166	SPDYE2B	A6NHP3	402 aa		12.95	□□□□□ -0.34
EPB41L2-231	ENST00000534166	SPDYE6	P0CI01	402 aa		12.95	□□□□□ -0.34
EPB41L2-231	ENST00000534166	SPDYE2	Q495Y8	402 aa		12.95	□□□□□ -0.34
EPB41L2-231	ENST00000534166	FBLN2	P98095	1184 aa		12.94	□□□□□ -0.34
EPB41L2-231	ENST00000534166	EVX2	Q03828	476 aa		12.84	□□□□□ -0.35
EPB41L2-231	ENST00000534166	PRKAR2A	P13861	404 aa	Known RBP	12.83	□□□□□ -0.36
EPB41L2-231	ENST00000534166	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.83	□□□□□ -0.36
EPB41L2-231	ENST00000534166	CLEC11A	Q9Y240	323 aa		12.83	□□□□□ -0.36
EPB41L2-231	ENST00000534166	MKRN4P	Q13434	485 aa	Predicted RBP	12.78	□□□□□ -0.36
EPB41L2-231	ENST00000534166	ZNF692	Q9BU19	519 aa	Predicted RBP	12.74	□□□□□ -0.37
EPB41L2-231	ENST00000534166	C19orf67	A6NJJ6	358 aa		12.69	□□□□□ -0.38
EPB41L2-231	ENST00000534166	SSUH2	Q9Y2M2	353 aa		12.68	□□□□□ -0.38
EPB41L2-231	ENST00000534166	GABBR2	O75899	941 aa		12.6	□□□□□ -0.39
EPB41L2-231	ENST00000534166	PRR29	P0C7W0	189 aa		12.57	□□□□□ -0.4
EPB41L2-231	ENST00000534166	CHADL	Q6NUI6	762 aa		12.57	□□□□□ -0.4
EPB41L2-231	ENST00000534166	LHX8	Q68G74	356 aa		12.53	□□□□□ -0.4
EPB41L2-231	ENST00000534166	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
EPB41L2-231	ENST00000534166	CD44	P16070	742 aa	Known RBP	12.41	□□□□□ -0.42
EPB41L2-231	ENST00000534166	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.36	□□□□□ -0.43
EPB41L2-231	ENST00000534166	CLCN6	P51797	869 aa		12.35	□□□□□ -0.43
EPB41L2-231	ENST00000534166	POTEI	P0CG38	1075 aa		12.27	□□□□□ -0.45
EPB41L2-231	ENST00000534166	DCBLD2	Q96PD2	775 aa		12.26	□□□□□ -0.45
EPB41L2-231	ENST00000534166	SPDYE4	A6NLX3	237 aa		12.2	□□□□□ -0.46
EPB41L2-231	ENST00000534166	ZNF579	Q8NAF0	562 aa	Known RBP	12.18	□□□□□ -0.46
EPB41L2-231	ENST00000534166	ZRANB1	Q9UGI0	708 aa		12.17	□□□□□ -0.46
EPB41L2-231	ENST00000534166	STAG3	Q9UJ98	1225 aa		12.15	□□□□□ -0.46
EPB41L2-231	ENST00000534166	PLSCR2	Q9NRY7	297 aa		12.09	□□□□□ -0.47
EPB41L2-231	ENST00000534166	CREBZF	Q9NS37	354 aa		12.09	□□□□□ -0.47
EPB41L2-231	ENST00000534166	PAK3	O75914	559 aa	Predicted RBP	12.07	□□□□□ -0.48
EPB41L2-231	ENST00000534166	GALR2	O43603	387 aa	Predicted RBP	12.03	□□□□□ -0.48
EPB41L2-231	ENST00000534166	PROM2	Q8N271	834 aa		11.98	□□□□□ -0.49
EPB41L2-231	ENST00000534166	NPM1	P06748	294 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
EPB41L2-231	ENST00000534166	CCDC180	Q9P1Z9	1646 aa		11.93	□□□□□ -0.5
EPB41L2-231	ENST00000534166	OTUD5	Q96G74	571 aa		11.93	□□□□□ -0.5
EPB41L2-231	ENST00000534166	PHF12	Q96QT6	1004 aa		11.93	□□□□□ -0.5
EPB41L2-231	ENST00000534166	FKBP8	Q14318	412 aa		11.88	□□□□□ -0.51
EPB41L2-231	ENST00000534166	POTEB2	H3BUK9	544 aa		11.85	□□□□□ -0.51
EPB41L2-231	ENST00000534166	POTEM	A6NI47	508 aa		11.82	□□□□□ -0.52
EPB41L2-231	ENST00000534166	MNX1	P50219	401 aa	Predicted RBP	11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms