RNA–Protein interactions for RNA: ENST00000413604.5

VGLL4-202, Transcript of vestigial like family member 4, humanhuman

TSL 2 BASIC

Gene VGLL4, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-202ENST00000413604 NISCHQ9Y2I1 1504 aa38.46■■■■□ 3.75
VGLL4-202ENST00000413604 CCDC180Q9P1Z9 1646 aa34.36■■■■□ 3.09
VGLL4-202ENST00000413604 ABCC9O60706 1549 aa34.21■■■■□ 3.07
VGLL4-202ENST00000413604 RB1CC1Q8TDY2 1594 aa32.59■■■□□ 2.81
VGLL4-202ENST00000413604 DCAF8L2P0C7V8 631 aa32.44■■■□□ 2.78
VGLL4-202ENST00000413604 NACADO15069 1562 aa32.42■■■□□ 2.78
VGLL4-202ENST00000413604 MYO15BQ96JP2 1530 aa32.02■■■□□ 2.72
VGLL4-202ENST00000413604 UNC13AQ9UPW8 1703 aa31.93■■■□□ 2.7
VGLL4-202ENST00000413604 ZCCHC6Q5VYS8 1495 aaKnown RBP31.93■■■□□ 2.7
VGLL4-202ENST00000413604 PABPN1Q86U42 306 aaKnown RBP eCLIP31.92■■■□□ 2.7
VGLL4-202ENST00000413604 DNAJC5BQ9UF47 199 aa31.91■■■□□ 2.7
VGLL4-202ENST00000413604 DCAF1Q9Y4B6 1507 aa31.73■■■□□ 2.67
VGLL4-202ENST00000413604 BICRAQ9NZM4 1560 aa31.7■■■□□ 2.66
VGLL4-202ENST00000413604 SCRIBQ14160 1630 aa31.41■■■□□ 2.62
VGLL4-202ENST00000413604 SHROOM4Q9ULL8 1493 aa31.16■■■□□ 2.58
VGLL4-202ENST00000413604 CC2D2AQ9P2K1 1620 aa30.89■■■□□ 2.54
VGLL4-202ENST00000413604 EIF4G1Q04637 1599 aaKnown RBP30.87■■■□□ 2.53
VGLL4-202ENST00000413604 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
VGLL4-202ENST00000413604 SMARCA4P51532 1647 aa29.95■■■□□ 2.39
VGLL4-202ENST00000413604 NCAPD3P42695 1498 aa29.95■■■□□ 2.38
VGLL4-202ENST00000413604 ATAD2BQ9ULI0 1458 aa29.91■■■□□ 2.38
VGLL4-202ENST00000413604 SMARCA2P51531 1590 aa29.81■■■□□ 2.36
VGLL4-202ENST00000413604 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
VGLL4-202ENST00000413604 HMGXB3Q12766 1538 aa29.74■■■□□ 2.35
VGLL4-202ENST00000413604 MROH2BQ7Z745 1585 aa29.68■■■□□ 2.34
VGLL4-202ENST00000413604 BAZ1BQ9UIG0 1483 aaKnown RBP29.63■■■□□ 2.33
VGLL4-202ENST00000413604 PEG3Q9GZU2 1588 aa29.63■■■□□ 2.33
VGLL4-202ENST00000413604 NESP48681 1621 aa29.48■■■□□ 2.31
VGLL4-202ENST00000413604 ERCC6Q03468 1493 aa29.47■■■□□ 2.31
VGLL4-202ENST00000413604 WIZO95785 1651 aa29.35■■■□□ 2.29
VGLL4-202ENST00000413604 CUX2O14529 1486 aa29.28■■■□□ 2.28
VGLL4-202ENST00000413604 LAMC3Q9Y6N6 1575 aa29.22■■■□□ 2.27
VGLL4-202ENST00000413604 RSF1Q96T23 1441 aaPredicted RBP29.15■■■□□ 2.26
VGLL4-202ENST00000413604 KIF21AQ7Z4S6 1674 aa29.08■■■□□ 2.25
VGLL4-202ENST00000413604 THOC2Q8NI27 1593 aaKnown RBP29.07■■■□□ 2.24
VGLL4-202ENST00000413604 CADPSQ9ULU8 1353 aa29.07■■■□□ 2.24
VGLL4-202ENST00000413604 PDS5BQ9NTI5 1447 aa29.04■■■□□ 2.24
VGLL4-202ENST00000413604 DNAJC5Q9H3Z4 198 aa29.04■■■□□ 2.24
VGLL4-202ENST00000413604 TOP2AP11388 1531 aaKnown RBP28.94■■■□□ 2.22
VGLL4-202ENST00000413604 MRC2Q9UBG0 1479 aa28.8■■■□□ 2.2
VGLL4-202ENST00000413604 CFTRP13569 1480 aa28.79■■■□□ 2.2
VGLL4-202ENST00000413604 FANCD2Q9BXW9 1451 aa28.75■■■□□ 2.19
VGLL4-202ENST00000413604 CEP164Q9UPV0 1460 aa28.74■■■□□ 2.19
VGLL4-202ENST00000413604 WDR62O43379 1518 aa28.71■■■□□ 2.19
VGLL4-202ENST00000413604 CCDC88BA6NC98 1476 aa28.65■■■□□ 2.18
VGLL4-202ENST00000413604 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.16
VGLL4-202ENST00000413604 PRDM2Q13029 1718 aa28.51■■■□□ 2.15
VGLL4-202ENST00000413604 TOPBP1Q92547 1522 aa28.24■■■□□ 2.11
VGLL4-202ENST00000413604 ZNF608Q9ULD9 1512 aaPredicted RBP28.14■■■□□ 2.1
VGLL4-202ENST00000413604 IFT140Q96RY7 1462 aa28.14■■■□□ 2.09
VGLL4-202ENST00000413604 DNMBPQ6XZF7 1577 aa28.13■■■□□ 2.09
VGLL4-202ENST00000413604 ABCC8Q09428 1581 aa28.12■■■□□ 2.09
VGLL4-202ENST00000413604 SUPT5HO00267 1087 aaKnown RBP28.11■■■□□ 2.09
VGLL4-202ENST00000413604 OSCARQ8IYS5 282 aa28.03■■■□□ 2.08
VGLL4-202ENST00000413604 POLA1P09884 1462 aaPredicted RBP27.97■■■□□ 2.07
VGLL4-202ENST00000413604 TARBP1Q13395 1621 aaKnown RBP27.97■■■□□ 2.07
VGLL4-202ENST00000413604 EIF4G3O43432 1585 aaKnown RBP27.96■■■□□ 2.07
VGLL4-202ENST00000413604 TRIM41Q8WV44 630 aa27.93■■■□□ 2.06
VGLL4-202ENST00000413604 AQRO60306 1485 aaKnown RBP eCLIP27.92■■■□□ 2.061e-7■■■■■ 36.6
VGLL4-202ENST00000413604 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
VGLL4-202ENST00000413604 CUX1P39880 1505 aa27.86■■■□□ 2.05
VGLL4-202ENST00000413604 SOGA1O94964 1423 aa27.84■■■□□ 2.05
VGLL4-202ENST00000413604 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
VGLL4-202ENST00000413604 TDRD9Q8NDG6 1382 aaKnown RBP27.79■■■□□ 2.04
VGLL4-202ENST00000413604 CHD1O14646 1710 aa27.73■■■□□ 2.03
VGLL4-202ENST00000413604 FBLN2P98095 1184 aa27.69■■■□□ 2.02
VGLL4-202ENST00000413604 RIMBP3CA6NJZ7 1639 aa27.66■■■□□ 2.02
VGLL4-202ENST00000413604 RIMBP3BA6NNM3 1639 aa27.66■■■□□ 2.02
VGLL4-202ENST00000413604 RIMBP3Q9UFD9 1639 aa27.66■■■□□ 2.02
VGLL4-202ENST00000413604 SNAPC4Q5SXM2 1469 aa27.61■■■□□ 2.01
VGLL4-202ENST00000413604 WDR97A6NE52 1622 aa27.61■■■□□ 2.01
VGLL4-202ENST00000413604 ARHGEF11O15085 1522 aa27.59■■■□□ 2.01
VGLL4-202ENST00000413604 GRIN2BQ13224 1484 aa27.54■■■□□ 2
VGLL4-202ENST00000413604 ABCA10Q8WWZ4 1543 aa27.51■■□□□ 1.99
VGLL4-202ENST00000413604 GAPVD1Q14C86 1478 aa27.5■■□□□ 1.99
VGLL4-202ENST00000413604 MAGI1Q96QZ7 1491 aaPredicted RBP27.5■■□□□ 1.99
VGLL4-202ENST00000413604 CHMP7Q8WUX9 453 aaPredicted RBP27.49■■□□□ 1.99
VGLL4-202ENST00000413604 PBRM1Q86U86 1689 aa27.48■■□□□ 1.99
VGLL4-202ENST00000413604 WRNQ14191 1432 aaPredicted RBP eCLIP27.47■■□□□ 1.99
VGLL4-202ENST00000413604 SYNJ1O43426 1573 aa27.47■■□□□ 1.99
VGLL4-202ENST00000413604 TOP2BQ02880 1626 aa27.46■■□□□ 1.99
VGLL4-202ENST00000413604 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.99
VGLL4-202ENST00000413604 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.99
VGLL4-202ENST00000413604 SYNJ2O15056 1496 aa27.43■■□□□ 1.98
VGLL4-202ENST00000413604 CYB5RLQ6IPT4 315 aa27.41■■□□□ 1.98
VGLL4-202ENST00000413604 CLASP1Q7Z460 1538 aa27.38■■□□□ 1.97
VGLL4-202ENST00000413604 ARAP1Q96P48 1450 aa27.35■■□□□ 1.97
VGLL4-202ENST00000413604 ADAMTS12P58397 1594 aa27.22■■□□□ 1.95
VGLL4-202ENST00000413604 GRIN2AQ12879 1464 aa27.21■■□□□ 1.95
VGLL4-202ENST00000413604 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
VGLL4-202ENST00000413604 FHAD1B1AJZ9 1412 aa27.14■■□□□ 1.94
VGLL4-202ENST00000413604 CEP170Q5SW79 1584 aa27.12■■□□□ 1.93
VGLL4-202ENST00000413604 NUP160Q12769 1436 aa27.1■■□□□ 1.93
VGLL4-202ENST00000413604 ERCC6L2Q5T890 1561 aa27.05■■□□□ 1.92
VGLL4-202ENST00000413604 TRHP20396 242 aaPredicted RBP27.01■■□□□ 1.92
VGLL4-202ENST00000413604 SHROOM2Q13796 1616 aa26.95■■□□□ 1.9
VGLL4-202ENST00000413604 KIF27Q86VH2 1401 aa26.92■■□□□ 1.9
VGLL4-202ENST00000413604 IGF1RP08069 1367 aa26.91■■□□□ 1.9
VGLL4-202ENST00000413604 JPH4Q96JJ6 628 aa26.85■■□□□ 1.89
VGLL4-202ENST00000413604 PRG4Q92954 1404 aaPredicted RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms