RNA–Protein interactions for RNA: ENST00000457138.6

DDX3X-203, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 2 BASIC

Gene DDX3X, Length 5,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-203ENST00000457138 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
DDX3X-203ENST00000457138 NISCHQ9Y2I1 1504 aa18.26■□□□□ 0.51
DDX3X-203ENST00000457138 SUPT5HO00267 1087 aaKnown RBP17.83■□□□□ 0.44
DDX3X-203ENST00000457138 SHROOM4Q9ULL8 1493 aa17.54■□□□□ 0.4
DDX3X-203ENST00000457138 APLP2Q06481 763 aa17.18■□□□□ 0.34
DDX3X-203ENST00000457138 FAM9AQ8IZU1 332 aaPredicted RBP17.16■□□□□ 0.34
DDX3X-203ENST00000457138 EHMT2Q96KQ7 1210 aa17.14■□□□□ 0.33
DDX3X-203ENST00000457138 PELP1Q8IZL8 1130 aaKnown RBP17.09■□□□□ 0.33
DDX3X-203ENST00000457138 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
DDX3X-203ENST00000457138 TTBK1Q5TCY1 1321 aaPredicted RBP16.56■□□□□ 0.24
DDX3X-203ENST00000457138 RANGAP1P46060 587 aaPredicted RBP16.53■□□□□ 0.24
DDX3X-203ENST00000457138 MYT1Q01538 1121 aa16.52■□□□□ 0.24
DDX3X-203ENST00000457138 ATP1B4Q9UN42 357 aaPredicted RBP16.52■□□□□ 0.23
DDX3X-203ENST00000457138 PCGF6Q9BYE7 350 aa16.5■□□□□ 0.23
DDX3X-203ENST00000457138 CENPBP07199 599 aaPredicted RBP16.47■□□□□ 0.23
DDX3X-203ENST00000457138 UBTFP17480 764 aaKnown RBP16.46■□□□□ 0.23
DDX3X-203ENST00000457138 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
DDX3X-203ENST00000457138 ZEB1P37275 1124 aaPredicted RBP16.42■□□□□ 0.22
DDX3X-203ENST00000457138 CCER1Q8TC90 406 aaPredicted RBP16.32■□□□□ 0.2
DDX3X-203ENST00000457138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
DDX3X-203ENST00000457138 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
DDX3X-203ENST00000457138 YTHDC1Q96MU7 727 aaKnown RBP16.03■□□□□ 0.16
DDX3X-203ENST00000457138 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.16
DDX3X-203ENST00000457138 NEFLP07196 543 aa16.01■□□□□ 0.15
DDX3X-203ENST00000457138 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
DDX3X-203ENST00000457138 PPARGC1BQ86YN6 1023 aaKnown RBP15.87■□□□□ 0.13
DDX3X-203ENST00000457138 ABCC9O60706 1549 aa15.84■□□□□ 0.13
DDX3X-203ENST00000457138 ITGAEP38570 1179 aa15.83■□□□□ 0.12
DDX3X-203ENST00000457138 HRCP23327 699 aa15.81■□□□□ 0.12
DDX3X-203ENST00000457138 CHIC1Q5VXU3 224 aa15.74■□□□□ 0.11
DDX3X-203ENST00000457138 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.113e-7■■□□□ 14.4
DDX3X-203ENST00000457138 POLR3GLQ9BT43 218 aa15.71■□□□□ 0.11
DDX3X-203ENST00000457138 LOC105371045A0A1W2PR82 267 aa15.63■□□□□ 0.09
DDX3X-203ENST00000457138 DAXXQ9UER7 740 aaPredicted RBP15.55■□□□□ 0.08
DDX3X-203ENST00000457138 FAM50AQ14320 339 aaKnown RBP15.53■□□□□ 0.08
DDX3X-203ENST00000457138 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
DDX3X-203ENST00000457138 TRIM52Q96A61 297 aa15.47■□□□□ 0.07
DDX3X-203ENST00000457138 FBLN2P98095 1184 aa15.43■□□□□ 0.06
DDX3X-203ENST00000457138 CNGB1Q14028 1251 aaPredicted RBP15.42■□□□□ 0.06
DDX3X-203ENST00000457138 RTL5Q5HYW3 569 aaPredicted RBP15.38■□□□□ 0.05
DDX3X-203ENST00000457138 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
DDX3X-203ENST00000457138 NEUROD1Q13562 356 aa15.27■□□□□ 0.04
DDX3X-203ENST00000457138 GTF3C3Q9Y5Q9 886 aa15.27■□□□□ 0.03
DDX3X-203ENST00000457138 CLSPNQ9HAW4 1339 aa15.24■□□□□ 0.03
DDX3X-203ENST00000457138 CDK11AQ9UQ88 783 aaPredicted RBP15.24■□□□□ 0.03
DDX3X-203ENST00000457138 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
DDX3X-203ENST00000457138 ZNF326Q5BKZ1 582 aaKnown RBP15.21■□□□□ 0.03
DDX3X-203ENST00000457138 SCRIBQ14160 1630 aa15.2■□□□□ 0.02
DDX3X-203ENST00000457138 ZNF316A6NFI3 1004 aaPredicted RBP15.19■□□□□ 0.02
DDX3X-203ENST00000457138 ANP32CO43423 234 aa15.16■□□□□ 0.02
DDX3X-203ENST00000457138 P3H3Q8IVL6 736 aa15.15■□□□□ 0.02
DDX3X-203ENST00000457138 BCANQ96GW7 911 aa15.14■□□□□ 0.01
DDX3X-203ENST00000457138 ZBTB47Q9UFB7 747 aaPredicted RBP15.12■□□□□ 0.01
DDX3X-203ENST00000457138 NEFMP07197 916 aa15.12■□□□□ 0.01
DDX3X-203ENST00000457138 ESF1Q9H501 851 aaKnown RBP15.11■□□□□ 0.01
DDX3X-203ENST00000457138 ZNF777Q9ULD5 760 aaPredicted RBP15.1■□□□□ 0.01
DDX3X-203ENST00000457138 ARID3CA6NKF2 412 aa15.09■□□□□ 0.01
DDX3X-203ENST00000457138 NPM1P06748 294 aaKnown RBP eCLIP15.08■□□□□ 0.01
DDX3X-203ENST00000457138 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0.01
DDX3X-203ENST00000457138 CCDC180Q9P1Z9 1646 aa15.06■□□□□ 0
DDX3X-203ENST00000457138 ACIN1Q9UKV3 1341 aaKnown RBP15.01□□□□□ -0.01
DDX3X-203ENST00000457138 CANXP27824 592 aaKnown RBP14.99□□□□□ -0.01
DDX3X-203ENST00000457138 SLC24A1O60721 1099 aa14.98□□□□□ -0.01
DDX3X-203ENST00000457138 STAG3Q9UJ98 1225 aa14.96□□□□□ -0.01
DDX3X-203ENST00000457138 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
DDX3X-203ENST00000457138 CHGAP10645 457 aaKnown RBP14.89□□□□□ -0.03
DDX3X-203ENST00000457138 TONSLQ96HA7 1378 aa14.89□□□□□ -0.03
DDX3X-203ENST00000457138 CHMP7Q8WUX9 453 aaPredicted RBP14.85□□□□□ -0.03
DDX3X-203ENST00000457138 EIF5BO60841 1220 aaKnown RBP14.84□□□□□ -0.03
DDX3X-203ENST00000457138 TSPY4P0CV99 314 aa14.82□□□□□ -0.04
DDX3X-203ENST00000457138 TSPY10P0CW01 314 aa14.82□□□□□ -0.04
DDX3X-203ENST00000457138 MTUS2Q5JR59 1369 aa14.78□□□□□ -0.04
DDX3X-203ENST00000457138 ANP32AP39687 249 aaKnown RBP14.77□□□□□ -0.04
DDX3X-203ENST00000457138 NACADO15069 1562 aa14.75□□□□□ -0.05
DDX3X-203ENST00000457138 PLPPR3Q6T4P5 718 aa14.75□□□□□ -0.05
DDX3X-203ENST00000457138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.054e-10■□□□□ 8.1
DDX3X-203ENST00000457138 BCL11AQ9H165 835 aa14.73□□□□□ -0.05
DDX3X-203ENST00000457138 CHIC2Q9UKJ5 165 aa14.72□□□□□ -0.05
DDX3X-203ENST00000457138 DCAF1Q9Y4B6 1507 aa14.71□□□□□ -0.05
DDX3X-203ENST00000457138 EEA1Q15075 1411 aa14.71□□□□□ -0.06
DDX3X-203ENST00000457138 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
DDX3X-203ENST00000457138 CLIP1P30622 1438 aa14.67□□□□□ -0.06
DDX3X-203ENST00000457138 BAZ1BQ9UIG0 1483 aaKnown RBP14.67□□□□□ -0.06
DDX3X-203ENST00000457138 NPM2Q86SE8 214 aaKnown RBP14.66□□□□□ -0.06
DDX3X-203ENST00000457138 GLIPR1L2Q4G1C9 344 aa14.66□□□□□ -0.06
DDX3X-203ENST00000457138 PLEKHD1A6NEE1 506 aa14.65□□□□□ -0.06
DDX3X-203ENST00000457138 FKBP8Q14318 412 aa14.64□□□□□ -0.07
DDX3X-203ENST00000457138 GOLGA3Q08378 1498 aa14.62□□□□□ -0.07
DDX3X-203ENST00000457138 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
DDX3X-203ENST00000457138 WDR43Q15061 677 aaKnown RBP eCLIP14.6□□□□□ -0.07
DDX3X-203ENST00000457138 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.6□□□□□ -0.07
DDX3X-203ENST00000457138 TMC1Q8TDI8 760 aa14.6□□□□□ -0.07
DDX3X-203ENST00000457138 UPF2Q9HAU5 1272 aaKnown RBP14.58□□□□□ -0.08
DDX3X-203ENST00000457138 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.08
DDX3X-203ENST00000457138 HNRNPUQ00839 825 aaKnown RBP eCLIP14.58□□□□□ -0.08
DDX3X-203ENST00000457138 KDM2AQ9Y2K7 1162 aa14.58□□□□□ -0.08
DDX3X-203ENST00000457138 KIF27Q86VH2 1401 aa14.58□□□□□ -0.08
DDX3X-203ENST00000457138 PPP1R15AO75807 674 aaPredicted RBP14.57□□□□□ -0.08
DDX3X-203ENST00000457138 DDX10Q13206 875 aaKnown RBP14.57□□□□□ -0.08
DDX3X-203ENST00000457138 KCNH8Q96L42 1107 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms