Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 EIF6-204ENST00000415116 739 ntTSL 524.1■■□□□ 1.452e-6■□□□□ 11.3
XRN2Q9H0D6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.86■□□□□ 0.611e-6■□□□□ 11.3
XRN2Q9H0D6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.041e-6■□□□□ 11.3
XRN2Q9H0D6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.861e-6■□□□□ 11.3
XRN2Q9H0D6 EPS8L2-212ENST00000528770 2233 ntTSL 217.46■□□□□ 0.393e-13■□□□□ 11.3
XRN2Q9H0D6 BLCAP-212ENST00000456058 572 ntTSL 424.3■■□□□ 1.484e-12■□□□□ 11.3
XRN2Q9H0D6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.74e-12■□□□□ 11.3
XRN2Q9H0D6 PTOV1-207ENST00000596424 625 ntTSL 221.84■■□□□ 1.098e-6■□□□□ 11.3
XRN2Q9H0D6 C2-213ENST00000484636 542 ntTSL 418.32■□□□□ 0.528e-6■□□□□ 11.3
XRN2Q9H0D6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.43■□□□□ 0.228e-6■□□□□ 11.3
XRN2Q9H0D6 C2-207ENST00000447952 837 ntTSL 316.33■□□□□ 0.28e-6■□□□□ 11.3
XRN2Q9H0D6 C2-216ENST00000494905 536 ntTSL 415.35■□□□□ 0.058e-6■□□□□ 11.3
XRN2Q9H0D6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.038e-7■□□□□ 11.3
XRN2Q9H0D6 HS6ST1-204ENST00000494089 585 ntTSL 221.97■■□□□ 1.111e-6■□□□□ 11.3
XRN2Q9H0D6 HS6ST1-203ENST00000469019 559 ntTSL 417.32■□□□□ 0.361e-6■□□□□ 11.3
XRN2Q9H0D6 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.351e-6■□□□□ 11.3
XRN2Q9H0D6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.93■■□□□ 1.94e-7■□□□□ 11.3
XRN2Q9H0D6 PCK2-215ENST00000561050 1856 ntTSL 220.87■□□□□ 0.934e-7■□□□□ 11.3
XRN2Q9H0D6 PCK2-206ENST00000558674 2189 ntTSL 218.32■□□□□ 0.524e-7■□□□□ 11.3
XRN2Q9H0D6 PLXNB1-203ENST00000449094 3863 ntTSL 212.47□□□□□ -0.416e-6■□□□□ 11.3
XRN2Q9H0D6 SLC16A3-218ENST00000583444 2882 nt18.75■□□□□ 0.596e-8■□□□□ 11.3
XRN2Q9H0D6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.345e-6■□□□□ 11.3
XRN2Q9H0D6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.92□□□□□ -0.185e-6■□□□□ 11.3
XRN2Q9H0D6 VIL1-202ENST00000392114 1968 ntTSL 2 BASIC13.01□□□□□ -0.339e-8■□□□□ 11.3
XRN2Q9H0D6 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.779e-8■□□□□ 11.3
XRN2Q9H0D6 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.452e-7■□□□□ 11.3
XRN2Q9H0D6 CHST15-205ENST00000628426 3553 ntTSL 2 BASIC11.98□□□□□ -0.492e-7■□□□□ 11.3
XRN2Q9H0D6 ADIPOR2-205ENST00000540974 480 ntTSL 315.1■□□□□ 0.012e-7■□□□□ 11.3
XRN2Q9H0D6 ADIPOR2-201ENST00000357103 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.532e-7■□□□□ 11.3
XRN2Q9H0D6 ADIPOR2-204ENST00000537545 484 ntTSL 310.19□□□□□ -0.782e-7■□□□□ 11.3
XRN2Q9H0D6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.713e-7■□□□□ 11.3
XRN2Q9H0D6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.663e-7■□□□□ 11.3
XRN2Q9H0D6 CTDSP1-215ENST00000498160 877 ntTSL 519.8■□□□□ 0.769e-7■□□□□ 11.3
XRN2Q9H0D6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.76■□□□□ 0.759e-7■□□□□ 11.3
XRN2Q9H0D6 CTDSP1-214ENST00000497677 998 ntTSL 218.78■□□□□ 0.69e-7■□□□□ 11.3
XRN2Q9H0D6 CTDSP1-205ENST00000452977 818 ntTSL 518.62■□□□□ 0.579e-7■□□□□ 11.3
XRN2Q9H0D6 CTDSP1-210ENST00000491064 786 ntTSL 317.04■□□□□ 0.329e-7■□□□□ 11.3
XRN2Q9H0D6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.049e-7■□□□□ 11.3
XRN2Q9H0D6 LINC01004-202ENST00000450686 538 ntTSL 3 BASIC12.47□□□□□ -0.415e-8■□□□□ 11.2
XRN2Q9H0D6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.27□□□□□ -1.735e-8■□□□□ 11.2
XRN2Q9H0D6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.662e-9■□□□□ 11.2
XRN2Q9H0D6 AES-206ENST00000586742 1666 ntTSL 321.62■■□□□ 1.052e-9■□□□□ 11.2
XRN2Q9H0D6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.12■□□□□ 0.492e-9■□□□□ 11.2
XRN2Q9H0D6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.62■□□□□ 0.255e-6■□□□□ 11.2
XRN2Q9H0D6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.035e-6■□□□□ 11.2
XRN2Q9H0D6 RNU12-201ENST00000362512 150 ntBASIC13.63□□□□□ -0.231e-323■□□□□ 11.2
XRN2Q9H0D6 Z93241.1-201ENST00000602478 664 ntBASIC12.6□□□□□ -0.391e-323■□□□□ 11.2
XRN2Q9H0D6 SLC16A3-212ENST00000581642 557 ntTSL 421.69■■□□□ 1.064e-7■□□□□ 11.2
XRN2Q9H0D6 CAPN15-208ENST00000637507 1482 ntTSL 525.62■■□□□ 1.694e-6■□□□□ 11.2
XRN2Q9H0D6 DDX3X-210ENST00000615313 568 ntTSL 422.94■■□□□ 1.267e-8■□□□□ 11.2
XRN2Q9H0D6 SLC2A8-206ENST00000423934 933 ntTSL 525.79■■□□□ 1.721e-9■□□□□ 11.2
XRN2Q9H0D6 SLC2A8-208ENST00000439597 854 ntTSL 325.79■■□□□ 1.721e-9■□□□□ 11.2
XRN2Q9H0D6 SLC2A8-214ENST00000489239 859 ntTSL 319.16■□□□□ 0.661e-9■□□□□ 11.2
XRN2Q9H0D6 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.313e-8■□□□□ 11.2
XRN2Q9H0D6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.534e-6■□□□□ 11.2
XRN2Q9H0D6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.284e-6■□□□□ 11.2
XRN2Q9H0D6 DLGAP4-214ENST00000491207 469 ntTSL 416.43■□□□□ 0.224e-6■□□□□ 11.2
XRN2Q9H0D6 DLGAP4-211ENST00000482037 603 ntTSL 515.93■□□□□ 0.144e-6■□□□□ 11.2
XRN2Q9H0D6 DLGAP4-212ENST00000482872 839 ntTSL 515.87■□□□□ 0.134e-6■□□□□ 11.2
XRN2Q9H0D6 DLGAP4-215ENST00000495241 794 ntTSL 213.21□□□□□ -0.294e-6■□□□□ 11.2
XRN2Q9H0D6 DLGAP4-203ENST00000373907 3337 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.514e-6■□□□□ 11.2
XRN2Q9H0D6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.64■■□□□ 1.051e-6■□□□□ 11.2
XRN2Q9H0D6 TSC22D4-205ENST00000493217 2060 ntTSL 1 (best)19.04■□□□□ 0.641e-6■□□□□ 11.2
XRN2Q9H0D6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.351e-6■□□□□ 11.2
XRN2Q9H0D6 PPAN-204ENST00000444703 757 ntTSL 330.77■■■□□ 2.525e-10■□□□□ 11.2
XRN2Q9H0D6 PPAN-208ENST00000486482 1017 ntTSL 229.58■■■□□ 2.335e-10■□□□□ 11.2
XRN2Q9H0D6 E2F4-209ENST00000567228 757 ntTSL 223.29■■□□□ 1.323e-7■□□□□ 11.2
XRN2Q9H0D6 E2F4-205ENST00000565226 446 ntTSL 516.44■□□□□ 0.223e-7■□□□□ 11.2
XRN2Q9H0D6 SHMT2-219ENST00000555563 895 ntTSL 516.13■□□□□ 0.174e-7■□□□□ 11.2
XRN2Q9H0D6 SHMT2-223ENST00000556689 768 ntTSL 315.68■□□□□ 0.14e-7■□□□□ 11.2
XRN2Q9H0D6 SHMT2-214ENST00000554604 879 ntTSL 514.7□□□□□ -0.064e-7■□□□□ 11.2
XRN2Q9H0D6 SHMT2-227ENST00000557269 576 ntTSL 514.56□□□□□ -0.084e-7■□□□□ 11.2
XRN2Q9H0D6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.493e-13■□□□□ 11.2
XRN2Q9H0D6 PGS1-211ENST00000589425 1944 ntTSL 1 (best)21.43■■□□□ 1.021e-6■□□□□ 11.2
XRN2Q9H0D6 PGS1-209ENST00000588169 1700 ntTSL 221.35■■□□□ 1.011e-6■□□□□ 11.2
XRN2Q9H0D6 PGS1-212ENST00000589426 2033 ntTSL 1 (best)19.75■□□□□ 0.751e-6■□□□□ 11.2
XRN2Q9H0D6 PGS1-202ENST00000585521 721 ntTSL 519.62■□□□□ 0.731e-6■□□□□ 11.2
XRN2Q9H0D6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.711e-6■□□□□ 11.2
XRN2Q9H0D6 PGS1-210ENST00000588281 1776 ntTSL 1 (best)19.27■□□□□ 0.681e-6■□□□□ 11.2
XRN2Q9H0D6 PGS1-205ENST00000586355 584 ntTSL 413.12□□□□□ -0.311e-6■□□□□ 11.2
XRN2Q9H0D6 PGS1-214ENST00000591996 3062 ntTSL 1 (best)12.2□□□□□ -0.461e-6■□□□□ 11.2
XRN2Q9H0D6 PGS1-203ENST00000586019 572 ntTSL 412.13□□□□□ -0.471e-6■□□□□ 11.2
XRN2Q9H0D6 CPSF7-210ENST00000474684 635 ntTSL 37.17□□□□□ -1.268e-11■□□□□ 11.2
XRN2Q9H0D6 ARID1A-216ENST00000637465 699 ntTSL 53.97□□□□□ -1.775e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-203ENST00000446331 1558 ntTSL 225.25■■□□□ 1.633e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.14■■□□□ 1.33e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.123e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-207ENST00000525607 1773 ntTSL 221.29■■□□□ 13e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.39■□□□□ 0.533e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.09■□□□□ 0.493e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-215ENST00000529464 932 ntTSL 1 (best)17.35■□□□□ 0.373e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.173e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.153e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.99■□□□□ 0.153e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-204ENST00000525283 898 ntTSL 315.45■□□□□ 0.063e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-225ENST00000622850 1987 ntTSL 2 BASIC12.46□□□□□ -0.413e-7■□□□□ 11.2
XRN2Q9H0D6 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.4□□□□□ -1.233e-7■□□□□ 11.2
XRN2Q9H0D6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.055e-7■□□□□ 11.2
XRN2Q9H0D6 PFN1-202ENST00000572383 539 ntTSL 321.07■□□□□ 0.965e-7■□□□□ 11.2
XRN2Q9H0D6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.46■■■■□ 3.112e-8■□□□□ 11.2
Retrieved 100 of 21,068 protein–RNA pairs in 105.5 ms